Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_23856_v3 Cicer arietinum L. HOM05D005285 ORTHO05D006829 1.4e-206 722.6 352 100.0
Psat4g195080 Pisum sativum HOM05D005285 ORTHO05D006829 2.5e-187 658.7 352 90.1
Medtr8g036165 Medicago truncatula HOM05D005285 ORTHO05D006829 8.2e-186 653.7 353 89.8
Lj3g0011351 Lotus japonicus HOM05D005285 ORTHO05D006829 1.6e-181 639.4 352 86.4
Lalb_Chr03g0033921 Lupinus albus HOM05D005285 ORTHO05D006829 7.4e-179 630.6 357 84.6
VMungo1127G2059 Vigna mungo HOM05D005285 ORTHO05D006829 1.3e-178 629.8 352 86.9
Glyma.12G239400 Glycine max HOM05D005285 ORTHO05D006829 5.3e-177 624.4 352 86.6
Phvul.011G213800 Phaseolus vulgaris HOM05D005285 ORTHO05D006829 5.3e-177 624.4 352 86.6
arahy.Tifrunner.gnm1.ann1.DICK3U Arachis hypogaea HOM05D005285 ORTHO05D006829 2.9e-175 618.6 353 83.9
MBI04_g14265_MAGBIO Magnolia biondii HOM05D005285 ORTHO05D006829 1.0e-167 593.6 357 78.7
RcHm_v2.0_Chr1g0314801 Rosa chinensis HOM05D005285 ORTHO05D006829 1.0e-167 593.6 351 80.6
Haze_03242 Corylus avellana HOM05D005285 ORTHO05D006829 2.2e-167 592.4 362 79.3
FAN01G1197 Fragaria x ananassa HOM05D005285 ORTHO05D006829 5.0e-167 591.3 351 80.1
FAN03G1002 Fragaria x ananassa HOM05D005285 ORTHO05D006829 5.0e-167 591.3 355 79.7
MD07G1005600 Malus domestica HOM05D005285 ORTHO05D006829 8.5e-167 590.5 351 80.6
MD02G1316300 Malus domestica HOM05D005285 ORTHO05D006829 1.5e-166 589.7 351 80.6
FvH4_7g00610 Fragaria vesca HOM05D005285 ORTHO05D006829 2.5e-166 589.0 351 80.3
FAN06G0391 Fragaria x ananassa HOM05D005285 ORTHO05D006829 2.5e-166 589.0 351 80.3
FAN10G3755 Fragaria x ananassa HOM05D005285 ORTHO05D006829 3.2e-166 588.6 351 80.3
CANSAT21G0587 Cannabis sativa HOM05D005285 ORTHO05D006829 4.2e-166 588.2 350 79.4
Dinv09380 Davidia involucrata HOM05D005285 ORTHO05D006829 7.2e-166 587.4 362 77.3
Cfa010729 Carpinus fangiana HOM05D005285 ORTHO05D006829 2.1e-165 585.9 362 78.5
TAR636G1692 Trochodendron aralioides HOM05D005285 ORTHO05D006829 2.7e-165 585.5 362 76.8
Actinidia20684 Actinidia chinensis HOM05D005285 ORTHO05D006829 6.1e-165 584.3 360 77.8
Rhsim01G0131200 Rhododendron simsii HOM05D005285 ORTHO05D006829 1.4e-164 583.2 365 76.7
TWI09G0675 Tripterygium wilfordii HOM05D005285 ORTHO05D006829 3.0e-164 582.0 360 77.8
Lj9A629T99 Lonicera japonica HOM05D005285 ORTHO05D006829 4.0e-164 581.6 354 78.8
QL04p004838 Quercus lobata HOM05D005285 ORTHO05D006829 4.0e-164 581.6 357 79.8
Gohir.A08G026900 Gossypium hirsutum HOM05D005285 ORTHO05D006829 8.8e-164 580.5 360 78.3
CSS0013341 Camellia sinensis var. sinensis HOM05D005285 ORTHO05D006829 1.2e-163 580.1 361 77.8
Nitab4.5_0002012g0040 Nicotiana tabacum HOM05D005285 ORTHO05D006829 1.2e-163 580.1 349 79.7
Thecc.01G414500 Theobroma cacao HOM05D005285 ORTHO05D006829 1.2e-163 580.1 358 78.2
A06p39410 Brassica napus HOM05D005285 ORTHO05D006829 2.0e-163 579.3 356 80.1
BraA06t26856Z Brassica rapa HOM05D005285 ORTHO05D006829 2.0e-163 579.3 356 80.1
Ciclev10031943m.g Citrus clementina HOM05D005285 ORTHO05D006829 2.0e-163 579.3 352 77.8
Gorai.004G035700 Gossypium raimondii HOM05D005285 ORTHO05D006829 3.4e-163 578.6 360 77.8
Nn7g36086 Nelumbo nucifera HOM05D005285 ORTHO05D006829 3.4e-163 578.6 363 75.8
PGR044G0372 Punica granatum HOM05D005285 ORTHO05D006829 3.4e-163 578.6 362 77.9
Sp2g18470 Schrenkiella parvula HOM05D005285 ORTHO05D006829 3.4e-163 578.6 355 79.4
Eucgr.J01257 Eucalyptus grandis HOM05D005285 ORTHO05D006829 5.7e-163 577.8 363 76.9
PSO339G1127 Papaver somniferum HOM05D005285 ORTHO05D006829 9.8e-163 577.0 365 74.8
THA.LOC104819060 Tarenaya hassleriana HOM05D005285 ORTHO05D006829 1.3e-162 576.6 359 77.2
Thhalv10004473m.g Eutrema salsugineum HOM05D005285 ORTHO05D006829 1.7e-162 576.2 356 78.9
Peaxi162Scf00042g00510 Petunia axillaris HOM05D005285 ORTHO05D006829 2.2e-162 575.9 355 77.2
DCAR_029637 Daucus carota HOM05D005285 ORTHO05D006829 3.7e-162 575.1 355 78.6
Aa31LG11G7560 Aethionema arabicum HOM05D005285 ORTHO05D006829 4.8e-162 574.7 358 78.8
BcaC06g30830 Brassica carinata HOM05D005285 ORTHO05D006829 6.3e-162 574.3 356 79.2
Gohir.D08G037700 Gossypium hirsutum HOM05D005285 ORTHO05D006829 6.3e-162 574.3 360 77.2
TWI53G0546 Tripterygium wilfordii HOM05D005285 ORTHO05D006829 6.3e-162 574.3 359 77.2
C07p38860 Brassica napus HOM05D005285 ORTHO05D006829 1.1e-161 573.5 356 79.2
Carub.0008s0757 Capsella rubella HOM05D005285 ORTHO05D006829 1.4e-161 573.2 351 79.8
ClCG10G012540 Citrullus lanatus HOM05D005285 ORTHO05D006829 1.4e-161 573.2 358 76.8
Hma1.2p1_1011F.1_g247500 Hydrangea macrophylla HOM05D005285 ORTHO05D006829 1.4e-161 573.2 387 72.9
GSVIVG01032048001 Vitis vinifera HOM05D005285 ORTHO05D006829 1.4e-161 573.2 362 76.0
Manes.10G147800 Manihot esculenta HOM05D005285 ORTHO05D006829 1.8e-161 572.8 365 77.0
AL8G20280 Arabidopsis lyrata HOM05D005285 ORTHO05D006829 2.4e-161 572.4 352 79.5
BolC7t44405H Brassica oleracea HOM05D005285 ORTHO05D006829 3.1e-161 572.0 356 78.9
Cpa.g.sc234.2 Carica papaya HOM05D005285 ORTHO05D006829 4.1e-161 571.6 362 77.1
Nitab4.5_0000050g0030 Nicotiana tabacum HOM05D005285 ORTHO05D006829 4.1e-161 571.6 348 78.2
Duzib268G1126 Durio zibethinus HOM05D005285 ORTHO05D006829 7.0e-161 570.9 358 76.8
Sed0014745 Sechium edule HOM05D005285 ORTHO05D006829 7.0e-161 570.9 359 75.8
MSTRG.20606 Avicennia marina HOM05D005285 ORTHO05D006829 9.1e-161 570.5 361 75.6
COL.COLO4_23903 Corchorus olitorius HOM05D005285 ORTHO05D006829 1.6e-160 569.7 349 79.1
Cc02_g27470 Coffea canephora HOM05D005285 ORTHO05D006829 2.0e-160 569.3 360 76.1
Sopen10g011740 Solanum pennellii HOM05D005285 ORTHO05D006829 2.7e-160 568.9 352 77.6
PSO384G1382 Papaver somniferum HOM05D005285 ORTHO05D006829 3.5e-160 568.5 365 73.7
MELO3C023957.2 Cucumis melo HOM05D005285 ORTHO05D006829 1.3e-159 566.6 359 75.8
Lsat_1_v5_gn_1_109141 Lactuca sativa HOM05D005285 ORTHO05D006829 1.7e-159 566.2 358 74.9
AT5G48020 Arabidopsis thaliana HOM05D005285 ORTHO05D006829 3.8e-159 565.1 352 78.1
ECA248G0026 Erigeron canadensis HOM05D005285 ORTHO05D006829 3.8e-159 565.1 351 76.1
CsaV3_3G032330 Cucumis sativus L. HOM05D005285 ORTHO05D006829 5.0e-159 564.7 359 75.2
Aqoxy2G00109 Aquilegia oxysepala HOM05D005285 ORTHO05D006829 6.5e-159 564.3 360 73.3
Oeu064272.1 Olea europaea HOM05D005285 ORTHO05D006829 6.5e-159 564.3 353 77.1
Potri.001G271100 Populus trichocarpa HOM05D005285 ORTHO05D006829 8.5e-159 563.9 365 75.3
Eucgr.J01254 Eucalyptus grandis HOM05D005285 ORTHO05D006829 1.1e-158 563.5 363 74.4
Eucgr.J01253 Eucalyptus grandis HOM05D005285 ORTHO05D006829 1.5e-158 563.1 363 74.1
Eucgr.J01256 Eucalyptus grandis HOM05D005285 ORTHO05D006829 1.5e-158 563.1 363 74.1
CARHR184290 Cardamine hirsuta HOM05D005285 ORTHO05D006829 3.2e-158 562.0 351 77.5
EL10Ac2g04308 Beta vulgaris HOM05D005285 ORTHO05D006829 4.2e-158 561.6 350 76.0
SGA_v2.0_scaffold646G53323 Striga asiatica HOM05D005285 ORTHO05D006829 7.2e-158 560.8 354 75.7
Migut.B01343 Erythranthe guttata HOM05D005285 ORTHO05D006829 2.1e-157 559.3 359 74.4
CDE04G1667 Ceratophyllum demersum HOM05D005285 ORTHO05D006829 2.7e-157 558.9 365 71.8
AUR62023050 Chenopodium quinoa HOM05D005285 ORTHO05D006829 6.1e-157 557.8 353 75.9
SalBow5G3096 Salvia bowleyana HOM05D005285 ORTHO05D006829 1.0e-156 557.0 359 73.8
Oeu039102.1 Olea europaea HOM05D005285 ORTHO05D006829 1.4e-156 556.6 357 75.1
SalBow5G3836 Salvia bowleyana HOM05D005285 ORTHO05D006829 2.3e-156 555.8 359 73.5
FAN01G1198 Fragaria x ananassa HOM05D005285 ORTHO05D006829 5.2e-156 554.7 443 63.7
Hund03676 Selenicereus undatus HOM05D005285 ORTHO05D006829 6.8e-156 554.3 348 76.7
unitig_26.g9596 Utricularia gibba HOM05D005285 ORTHO05D006829 6.8e-156 554.3 355 74.4
Hund03675 Selenicereus undatus HOM05D005285 ORTHO05D006829 2.2e-154 549.3 380 71.1
Zm00001eb189240 Zea mays HOM05D005285 ORTHO05D006829 4.5e-152 541.6 355 72.1
Os02g0717500 Oryza sativa ssp. japonica HOM05D005285 ORTHO05D006829 1.0e-151 540.4 355 71.8
vmacro21170 Vaccinium macrocarpon HOM05D005285 ORTHO05D006829 2.3e-151 539.3 410 67.1
ATR0605G013 Amborella trichopoda HOM05D005285 ORTHO05D006829 1.6e-149 533.1 366 69.9
QL04p004878 Quercus lobata HOM05D005285 ORTHO05D006829 7.5e-147 524.2 360 69.4
AUR62009369 Chenopodium quinoa HOM05D005285 ORTHO05D006829 2.9e-146 522.3 328 76.2
ECA248G2524 Erigeron canadensis HOM05D005285 ORTHO05D006829 2.9e-146 522.3 354 68.1
Lj9C629T1 Lonicera japonica HOM05D005285 ORTHO05D006829 2.9e-146 522.3 359 70.8
Sabra16G0166500 Salix brachista HOM05D005285 ORTHO05D006829 4.9e-146 521.5 436 61.9
Atru.chr11.2010 Acer truncatum HOM05D005285 ORTHO05D006829 1.2e-144 516.9 348 71.6
QL04p004868 Quercus lobata HOM05D005285 ORTHO05D006829 1.2e-144 516.9 360 68.1
Lsat_1_v5_gn_1_111020 Lactuca sativa HOM05D005285 ORTHO05D006829 7.8e-144 514.2 357 67.5
SEGI_06931 Sequoiadendron giganteum HOM05D005285 ORTHO05D006829 1.5e-142 510.0 374 65.5
SGA_v2.0_scaffold646G53324 Striga asiatica HOM05D005285 ORTHO05D006829 2.8e-141 505.8 449 56.8
AagrBONN_evm.TU.Sc2ySwM_228.3236 Anthoceros agrestis HOM05D005285 ORTHO05D006829 3.6e-141 505.4 357 66.4
ECA248G2079 Erigeron canadensis HOM05D005285 ORTHO05D006829 4.7e-141 505.0 357 66.1
QL04p004849 Quercus lobata HOM05D005285 ORTHO05D006829 2.3e-140 502.7 362 64.6
Mapoly0019s0106 Marchantia polymorpha HOM05D005285 ORTHO05D006829 3.1e-140 502.3 357 65.3
HanXRQChr11g0330581 Helianthus annuus HOM05D005285 ORTHO05D006829 4.0e-140 501.9 357 65.0
HanXRQChr11g0330561 Helianthus annuus HOM05D005285 ORTHO05D006829 7.5e-139 497.7 352 64.2
SMO364G0792 Selaginella moellendorffii HOM05D005285 ORTHO05D006829 4.1e-137 491.9 350 64.6
Atru.chr11.2632 Acer truncatum HOM05D005285 ORTHO05D006829 2.3e-135 486.1 388 65.5
Prupe.2G008000 Prunus persica HOM05D005285 ORTHO05D006829 1.6e-133 479.9 272 84.6
SHI04065 Sapria himalayana HOM05D000259 ORTHO05D000155 8.3e-130 467.6 520 48.8
Prupe.2G008200 Prunus persica HOM05D005285 ORTHO05D006829 1.2e-123 447.2 253 83.0
Pp3c17_23530 Physcomitrium patens HOM05D005285 ORTHO05D006829 1.5e-123 446.8 333 63.7
Sc11g0009350 Simmondsia chinensis HOM05D005285 ORTHO05D006829 2.5e-118 429.5 270 75.6
Sed0008744 Sechium edule HOM05D005285 ORTHO05D006829 4.7e-117 425.2 344 64.5
HPP92_022786 Vanilla planifolia HOM05D005285 ORTHO05D006829 2.2e-114 416.4 273 72.9
Ca_24082_v3 Cicer arietinum L. HOM05D005285 ORTHO05D006829 1.6e-109 400.2 344 57.3
Lsat_1_v5_gn_1_72821 Lactuca sativa HOM05D005285 ORTHO05D006829 1.6e-104 383.6 344 55.5
Cre13.g586400 Chlamydomonas reinhardtii HOM05D005285 ORTHO05D006829 2.8e-101 372.9 373 48.5
Pp3c14_26250 Physcomitrium patens HOM05D005285 ORTHO05D006829 1.5e-99 367.1 241 70.5
arahy.Tifrunner.gnm1.ann1.A7HRCY Arachis hypogaea HOM05D005285 ORTHO05D006829 3.9e-87 325.9 272 64.0
TPR.G21746 Trifolium pratense HOM05D005285 ORTHO05D006829 1.1e-84 317.8 177 87.6
TPR.G21737 Trifolium pratense HOM05D005285 ORTHO05D006829 5.9e-83 312.0 160 92.5
Solyc10g037950.2 Solanum lycopersicum HOM05D005285 ORTHO05D006829 3.5e-80 302.8 192 75.5
HanXRQChr11g0330591 Helianthus annuus HOM05D005285 ORTHO05D006829 5.7e-78 295.4 223 61.9
Eucgr.L03705 Eucalyptus grandis HOM05D005285 ORTHO05D006829 1.3e-74 284.3 178 76.4
HanXRQChr01g0017351 Helianthus annuus HOM05D005285 ORTHO05D006829 5.0e-74 282.3 177 72.9
Solyc10g037960.3 Solanum lycopersicum HOM05D005285 ORTHO05D006829 7.2e-73 278.5 159 82.4
Ca_24079_v3 Cicer arietinum L. HOM05D005285 ORTHO05D006829 4.6e-72 275.8 346 46.2
Cpa.g.sc2760.1 Carica papaya HOM05D005285 ORTHO05D006829 6.7e-55 218.8 174 59.8
Rhsim06G0016300 Rhododendron simsii HOM05D005285 ORTHO05D006829 4.2e-49 199.5 117 81.2
Peaxi162Scf00451g00621 Petunia axillaris HOM05D005285 ORTHO05D006829 6.3e-45 185.7 168 57.7
HanXRQChr11g0330601 Helianthus annuus HOM05D005285 ORTHO05D006829 9.1e-44 181.8 106 74.5
Actinidia21565 Actinidia chinensis HOM05D005285 ORTHO05D006829 2.0e-35 154.1 107 72.0
Oeu039103.1 Olea europaea HOM05D005285 ORTHO05D008854 1.0e-34 151.8 89 82.0
Atru.ctg794.7 Acer truncatum HOM05D005285 ORTHO05D037890 1.4e-28 131.3 147 51.7
Oeu039101.1 Olea europaea HOM05D000288 ORTHO05D000173 1.6e-24 117.9 88 65.9
vmacro21176 Vaccinium macrocarpon HOM05D005285 ORTHO05D006829 1.4e-20 104.8 58 84.5
TPR.G13313 Trifolium pratense HOM05D005285 ORTHO05D413460 4.1e-20 103.2 77 64.9
Atru.chr13.2215 Acer truncatum HOM05D005285 ORTHO05D037890 3.5e-19 100.1 54 83.3
arahy.Tifrunner.gnm1.ann1.J91U4H Arachis hypogaea HOM05D000001 ORTHO05D004533 3.0e-18 97.1 62 66.1
VMungo1127G1344 Vigna mungo HOM05D000839 ORTHO05D000664 1.4e-15 88.2 49 89.8
Lsat_1_v5_gn_0_6420 Lactuca sativa HOM05D002112 ORTHO05D007960 5.2e-15 86.3 81 54.3
CDE07G0090 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 2.0e-14 84.3 232 27.2
arahy.Tifrunner.gnm1.ann1.43BKZS Arachis hypogaea HOM05D000001 ORTHO05D000003 1.3e-13 81.6 52 73.1
TPR.G1074 Trifolium pratense HOM05D005285 ORTHO05D411165 7.1e-12 75.9 74 52.7
Psat5g028000 Pisum sativum HOM05D000206 ORTHO05D000232 2.3e-07 60.8 169 27.2
arahy.Tifrunner.gnm1.ann1.81AB3J Arachis hypogaea HOM05D000001 ORTHO05D084391 4.0e-07 60.1 43 62.8
Lsat_1_v5_gn_9_64201 Lactuca sativa HOM05D000310 ORTHO05D005377 5.2e-07 59.7 33 81.8
Oeu000043.1 Olea europaea HOM05D000206 ORTHO05D000232 5.2e-07 59.7 284 23.2
Gorai.004G196100 Gossypium raimondii HOM05D001438 ORTHO05D001336 8.9e-07 58.9 264 23.9
Ciclev10008880m.g Citrus clementina HOM05D001438 ORTHO05D001336 1.5e-06 58.2 267 24.0
QL11p038890 Quercus lobata HOM05D000018 ORTHO05D001172 1.5e-06 58.2 216 24.5
QL11p040202 Quercus lobata HOM05D000018 ORTHO05D001172 2.6e-06 57.4 216 25.5
Psat5g027840 Pisum sativum HOM05D000206 ORTHO05D000232 4.4e-06 56.6 194 24.2
VMungo0251G2816 Vigna mungo HOM05D001438 ORTHO05D001336 4.4e-06 56.6 262 22.9
Nitab4.5_0000522g0150 Nicotiana tabacum HOM05D000206 ORTHO05D000232 5.8e-06 56.2 169 23.7


User provided reference genes

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