Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_23847_v3 Cicer arietinum L. HOM05D000060 ORTHO05D000428 3.2e-54 214.9 114 100.0
TPR.G21743 Trifolium pratense HOM05D000060 ORTHO05D000428 6.6e-44 180.6 114 87.7
Medtr8g036105 Medicago truncatula HOM05D000060 ORTHO05D000428 4.7e-42 174.5 114 86.0
Lj3g0008253 Lotus japonicus HOM05D000060 ORTHO05D000428 2.3e-36 155.6 114 77.2
Psat4g195560 Pisum sativum HOM05D000060 ORTHO05D000428 3.5e-29 131.7 101 77.2
Glyma.01G143800 Glycine max HOM05D000060 ORTHO05D000428 9.6e-27 123.6 113 69.0
Phvul.010G084900 Phaseolus vulgaris HOM05D000060 ORTHO05D000428 8.9e-25 117.1 113 65.5
Lalb_Chr07g0189721 Lupinus albus HOM05D000060 ORTHO05D000428 1.5e-24 116.3 115 60.9
VMungo0331G0304 Vigna mungo HOM05D000060 ORTHO05D000428 4.4e-24 114.8 113 63.7
Glyma.03G023100 Glycine max HOM05D000060 ORTHO05D000428 5.4e-22 107.8 109 62.4
COL.COLO4_12555 Corchorus olitorius HOM05D000060 ORTHO05D000428 2.3e-20 102.4 114 58.8
Ciclev10022291m.g Citrus clementina HOM05D000060 ORTHO05D000428 5.6e-19 97.8 113 54.0
Thecc.01G375300 Theobroma cacao HOM05D000060 ORTHO05D000428 5.6e-19 97.8 112 55.4
arahy.Tifrunner.gnm1.ann1.B83AGW Arachis hypogaea HOM05D000060 ORTHO05D000428 5.8e-16 87.8 123 50.4
CiPaw.02G166900 Carya illinoinensis HOM05D000060 ORTHO05D000428 9.9e-16 87.0 114 49.1
Cfa001711 Carpinus fangiana HOM05D000060 ORTHO05D000428 1.3e-15 86.7 118 50.8
Duzib138G0162 Durio zibethinus HOM05D000060 ORTHO05D000428 1.7e-15 86.3 112 50.9
Prupe.2G146500 Prunus persica HOM05D000060 ORTHO05D000428 1.7e-15 86.3 122 50.8
QL08p052233 Quercus lobata HOM05D000060 ORTHO05D000428 2.2e-15 85.9 115 47.8
Gohir.A11G081200 Gossypium hirsutum HOM05D000060 ORTHO05D000428 1.9e-14 82.8 112 49.1
Gorai.007G091600 Gossypium raimondii HOM05D000060 ORTHO05D000428 1.9e-14 82.8 112 50.0
Manes.05G044600 Manihot esculenta HOM05D000060 ORTHO05D000428 1.9e-14 82.8 115 46.1
RcHm_v2.0_Chr1g0350701 Rosa chinensis HOM05D000060 ORTHO05D000428 2.4e-14 82.4 116 49.1
arahy.Tifrunner.gnm1.ann1.MZY4NM Arachis hypogaea HOM05D000060 ORTHO05D000428 3.2e-14 82.0 123 48.0
Lj9A570T43 Lonicera japonica HOM05D000060 ORTHO05D000428 5.4e-14 81.3 112 49.1
Haze_16823 Corylus avellana HOM05D000060 ORTHO05D000428 1.2e-13 80.1 120 50.8
Gohir.D11G085700 Gossypium hirsutum HOM05D000060 ORTHO05D000428 1.6e-13 79.7 112 49.1
FAN01G1836 Fragaria x ananassa HOM05D000060 ORTHO05D000428 2.1e-13 79.3 116 45.7
TWI14G0618 Tripterygium wilfordii HOM05D000060 ORTHO05D000428 2.1e-13 79.3 124 45.2
Actinidia33462 Actinidia chinensis HOM05D000060 ORTHO05D000428 6.0e-13 77.8 114 46.5
FAN10G3745 Fragaria x ananassa HOM05D000060 ORTHO05D000428 1.0e-12 77.0 116 43.1
MD02G1203000 Malus domestica HOM05D000060 ORTHO05D000428 1.0e-12 77.0 116 45.7
Potri.002G148900 Populus trichocarpa HOM05D000060 ORTHO05D000428 1.3e-12 76.6 114 46.5
CiPaw.01G261400 Carya illinoinensis HOM05D000060 ORTHO05D000428 2.3e-12 75.9 119 47.9
FAN03G0492 Fragaria x ananassa HOM05D000060 ORTHO05D000428 1.1e-11 73.6 116 44.0
FAN06G4173 Fragaria x ananassa HOM05D000060 ORTHO05D000428 1.1e-11 73.6 116 43.1
Atru.chr5.318 Acer truncatum HOM05D000060 ORTHO05D000428 2.5e-11 72.4 126 42.1
CSS0025467 Camellia sinensis var. sinensis HOM05D000060 ORTHO05D000428 2.5e-11 72.4 117 47.0
FvH4_7g11980 Fragaria vesca HOM05D000060 ORTHO05D000428 3.3e-11 72.0 116 42.2
FAN06G4401 Fragaria x ananassa HOM05D000060 ORTHO05D000428 3.3e-11 72.0 116 42.2
CSS0031803 Camellia sinensis var. sinensis HOM05D000060 ORTHO05D000428 9.6e-11 70.5 119 46.2
Duzib133G0432 Durio zibethinus HOM05D000060 ORTHO05D000428 9.6e-11 70.5 101 50.5
FAN10G3959 Fragaria x ananassa HOM05D000060 ORTHO05D000428 1.6e-10 69.7 116 41.4
CSS0004733 Camellia sinensis var. sinensis HOM05D000060 ORTHO05D000428 4.8e-10 68.2 120 45.0
CANSAT56G4376 Cannabis sativa HOM05D000060 ORTHO05D000428 4.8e-10 68.2 117 43.6
Sc02g0002550 Simmondsia chinensis HOM05D000060 ORTHO05D000428 6.2e-10 67.8 123 40.7
Dinv43718 Davidia involucrata HOM05D000060 ORTHO05D000428 1.1e-09 67.0 116 41.4
Nitab4.5_0003530g0040 Nicotiana tabacum HOM05D000060 ORTHO05D000428 1.4e-09 66.6 112 44.6
Nn4g26283 Nelumbo nucifera HOM05D000060 ORTHO05D000428 2.4e-09 65.9 114 44.7
Sabra02G0115900 Salix brachista HOM05D000060 ORTHO05D000428 2.4e-09 65.9 114 44.7
Sabra02G0117700 Salix brachista HOM05D000060 ORTHO05D000428 2.4e-09 65.9 114 44.7
Oeu005781.1 Olea europaea HOM05D000060 ORTHO05D000428 4.0e-09 65.1 114 38.6
TAR629G1210 Trochodendron aralioides HOM05D000060 ORTHO05D000428 4.0e-09 65.1 112 42.9
TWI59G0065 Tripterygium wilfordii HOM05D000060 ORTHO05D000428 9.0e-09 63.9 121 40.5
Gohir.A12G101933 Gossypium hirsutum HOM05D000060 ORTHO05D000428 1.5e-08 63.2 113 43.4
Manes.01G265400 Manihot esculenta HOM05D000060 ORTHO05D000428 9.9e-08 60.5 114 40.4
Gohir.D12G105000 Gossypium hirsutum HOM05D000060 ORTHO05D000428 1.3e-07 60.1 113 43.4
Hma1.2p1_0086F.1_g044860 Hydrangea macrophylla HOM05D000060 ORTHO05D000428 1.7e-07 59.7 103 41.7
GSVIVG01027620001 Vitis vinifera HOM05D000060 ORTHO05D000428 2.9e-07 58.9 115 35.7
Gorai.008G114300 Gossypium raimondii HOM05D000060 ORTHO05D000428 6.4e-07 57.8 113 42.5
Nn1g01211 Nelumbo nucifera HOM05D000060 ORTHO05D000428 1.4e-06 56.6 103 41.7
AL6G53290 Arabidopsis lyrata HOM05D000060 ORTHO05D000428 1.9e-06 56.2 125 37.6
Peaxi162Scf00238g01417 Petunia axillaris HOM05D000060 ORTHO05D000428 2.4e-06 55.8 104 44.2
PGR042G1341 Punica granatum HOM05D000060 ORTHO05D000428 2.4e-06 55.8 117 39.3
Sed0002346 Sechium edule HOM05D000060 ORTHO05D000428 2.4e-06 55.8 111 40.5
Aqoxy7G00604 Aquilegia oxysepala HOM05D000036 ORTHO05D000095 7.1e-06 54.3 109 40.4


User provided reference genes

Program Settings