Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_23808_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.5e-98 362.8 178 100.0
Ca_02604_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.8e-81 305.4 259 66.4
Ca_11754_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.1e-80 303.5 259 66.0
Ca_23803_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.0e-79 299.3 259 65.3
Ca_02605_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.0e-63 246.1 227 61.7
Psat6g201280 Pisum sativum HOM05D000107 ORTHO05D000062 5.1e-51 204.9 248 49.6
TPR.G13772 Trifolium pratense HOM05D000107 ORTHO05D000062 1.8e-48 196.4 239 49.4
Psat4g189240 Pisum sativum HOM05D000107 ORTHO05D000062 1.8e-43 179.9 222 47.7
Ca_14703_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 6.7e-43 177.9 200 53.0
Psat6g199080 Pisum sativum HOM05D000107 ORTHO05D000062 4.0e-40 168.7 138 61.6
Psat1g138720 Pisum sativum HOM05D000107 ORTHO05D000062 5.7e-34 148.3 161 50.9
Ca_12564_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.6e-31 139.4 165 51.5
TPR.G34598 Trifolium pratense HOM05D000107 ORTHO05D000062 4.6e-28 128.6 152 48.7
Ca_13696_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.1e-26 124.0 70 90.0
Ca_27975_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 4.1e-24 115.5 122 58.2
Lj1g0012478 Lotus japonicus HOM05D000107 ORTHO05D000062 5.1e-19 98.6 152 35.5
PGSC0003DMG400011670 Solanum tuberosum HOM05D000107 ORTHO05D000062 4.8e-17 92.0 161 34.8
Ca_27005_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000110 5.3e-16 88.6 62 82.3
Sopen11g015850 Solanum pennellii HOM05D000107 ORTHO05D000062 5.3e-16 88.6 147 34.7
Lalb_Chr10g0094831 Lupinus albus HOM05D000107 ORTHO05D000062 5.9e-15 85.1 150 36.7
Sopen08g018280 Solanum pennellii HOM05D000107 ORTHO05D000695 6.5e-14 81.6 153 33.3
Ca_20168_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 8.5e-14 81.3 39 89.7
Psat0s2772g0120 Pisum sativum HOM05D000107 ORTHO05D000062 2.5e-13 79.7 91 47.3
Psat0s2381g0040 Pisum sativum HOM05D000107 ORTHO05D000062 4.2e-13 79.0 185 32.4
Psat0s472g0040 Pisum sativum HOM05D000107 ORTHO05D000062 4.2e-13 79.0 185 32.4
Solyc05g042155.1 Solanum lycopersicum HOM05D000107 ORTHO05D000062 9.4e-13 77.8 131 35.9
Sopen09g020930 Solanum pennellii HOM05D000107 ORTHO05D000062 9.4e-13 77.8 80 48.8
Solyc09g030515.1 Solanum lycopersicum HOM05D000107 ORTHO05D000062 2.1e-12 76.6 134 34.3
Psat5g178040 Pisum sativum HOM05D002954 ORTHO05D003353 6.1e-12 75.1 137 34.3
Solyc05g042015.1 Solanum lycopersicum HOM05D000107 ORTHO05D000062 6.1e-12 75.1 102 41.2
Psat2g020120 Pisum sativum HOM05D002954 ORTHO05D000062 1.4e-11 73.9 144 34.0
CAN.G501.3 Capsicum annuum HOM05D000107 ORTHO05D000062 2.3e-11 73.2 104 41.3
Sopen03g020080 Solanum pennellii HOM05D000107 ORTHO05D000062 2.3e-11 73.2 82 45.1
Psat3g063200 Pisum sativum HOM05D002954 ORTHO05D003353 2.2e-09 66.6 91 44.0
RhsimUnG0245800 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.8e-09 66.2 163 30.1
CANSAT11G2258 Cannabis sativa HOM05D000107 ORTHO05D000062 3.7e-09 65.9 107 34.6
Lj1g0022399 Lotus japonicus HOM05D000107 ORTHO05D000062 3.7e-09 65.9 120 35.8
Os12g0544600 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D000062 3.7e-09 65.9 171 31.0
Rhsim01G0104600 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.7e-09 65.9 136 33.8
AUR62036790 Chenopodium quinoa HOM05D000107 ORTHO05D000062 8.2e-09 64.7 124 33.9
Rhsim01G0081600 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.2e-09 64.7 131 35.9
CSS0007472 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.1e-08 64.3 116 31.9
CSS0007710 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.1e-08 64.3 116 31.9
CSS0009480 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.1e-08 64.3 116 31.9
CSS0018002 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.1e-08 64.3 116 31.9
CSS0028705 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.1e-08 64.3 116 31.9
CSS0031171 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.1e-08 64.3 116 31.9
CSS0036122 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.1e-08 64.3 116 31.9
CSS0047073 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.1e-08 64.3 116 31.9
Os02g0543900 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D000062 1.1e-08 64.3 137 32.8
Rhsim01G0072500 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.1e-08 64.3 118 29.7
CSS0013241 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.4e-08 63.9 116 31.9
EL10Ac2g03191 Beta vulgaris HOM05D000107 ORTHO05D000062 1.8e-08 63.5 121 28.1
CSS0007461 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.8e-08 63.5 116 31.9
Ca_13669_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.8e-08 63.5 61 60.7
Sp4g09570 Schrenkiella parvula HOM05D000107 ORTHO05D000062 2.4e-08 63.2 75 34.7
Os01g0768600 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D000062 3.1e-08 62.8 171 30.4
Rhsim01G0079200 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.1e-08 62.8 131 34.4
TWI79G1319 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 4.1e-08 62.4 131 32.1
TAR003G0008 Trochodendron aralioides HOM05D000107 ORTHO05D000062 7.0e-08 61.6 112 33.0
EL10Ac3g06709 Beta vulgaris HOM05D000107 ORTHO05D000062 9.1e-08 61.2 135 28.9
CANSAT78G2036 Cannabis sativa HOM05D000107 ORTHO05D000062 9.1e-08 61.2 106 33.0
ECA247G3242 Erigeron canadensis HOM05D003337 ORTHO05D003808 9.1e-08 61.2 107 36.4
Rhsim09G0075900 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.1e-08 61.2 136 33.1
Sopen04g016700 Solanum pennellii HOM05D000107 ORTHO05D000062 9.1e-08 61.2 108 33.3
EL10Ac9g22338 Beta vulgaris HOM05D000107 ORTHO05D000062 1.2e-07 60.8 163 28.8
EL10As2g23233 Beta vulgaris HOM05D000107 ORTHO05D000062 1.2e-07 60.8 138 31.2
CSS0004309 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.6e-07 60.5 107 36.4
Rhsim05G0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.6e-07 60.5 136 32.4
EL10Ac9g20977 Beta vulgaris HOM05D000107 ORTHO05D000062 2.0e-07 60.1 152 29.6
Nn7g37794 Nelumbo nucifera HOM05D000107 ORTHO05D000062 2.0e-07 60.1 172 27.3
EL10As3g23355 Beta vulgaris HOM05D000107 ORTHO05D000062 2.6e-07 59.7 93 37.6
TWI74G1678 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 2.6e-07 59.7 187 28.3
ECA234G1212 Erigeron canadensis HOM05D000107 ORTHO05D000062 3.5e-07 59.3 107 36.4
ECA234G2344 Erigeron canadensis HOM05D000107 ORTHO05D000062 3.5e-07 59.3 143 31.5
Rhsim04G0054900 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.5e-07 59.3 135 28.9
CSS0004152 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.5e-07 58.9 107 36.4
ECA232G4762 Erigeron canadensis HOM05D000107 ORTHO05D000062 4.5e-07 58.9 129 28.7
CAN.G183.28 Capsicum annuum HOM05D000211 ORTHO05D011198 5.9e-07 58.5 81 44.4
Nn1g06875 Nelumbo nucifera HOM05D000107 ORTHO05D000062 5.9e-07 58.5 140 29.3
FvH4_1g24191 Fragaria vesca HOM05D000107 ORTHO05D000062 7.7e-07 58.2 156 25.6
EL10As28g24252 Beta vulgaris HOM05D000107 ORTHO05D000062 1.0e-06 57.8 163 27.0
Rhsim01G0080000 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.0e-06 57.8 119 35.3
EL10Ac1g01187 Beta vulgaris HOM05D000107 ORTHO05D000062 1.3e-06 57.4 152 28.9
EL10Ac2g03906 Beta vulgaris HOM05D000107 ORTHO05D000062 1.3e-06 57.4 152 28.9
EL10Ac3g06412 Beta vulgaris HOM05D000107 ORTHO05D000062 1.3e-06 57.4 152 29.6
EL10Ac4g09022 Beta vulgaris HOM05D000107 ORTHO05D000062 1.3e-06 57.4 152 28.9
EL10Ac5g11735 Beta vulgaris HOM05D000107 ORTHO05D000062 1.3e-06 57.4 162 27.2
EL10Ac6g14098 Beta vulgaris HOM05D000107 ORTHO05D000062 1.3e-06 57.4 152 28.9
EL10Ac9g21093 Beta vulgaris HOM05D000107 ORTHO05D000062 1.3e-06 57.4 152 28.9
ECA238G0623 Erigeron canadensis HOM05D000107 ORTHO05D000001 1.3e-06 57.4 114 30.7
EL10Ac1g01130 Beta vulgaris HOM05D000107 ORTHO05D000062 1.7e-06 57.0 152 28.9
EL10Ac2g03338 Beta vulgaris HOM05D000107 ORTHO05D000062 1.7e-06 57.0 110 32.7
EL10Ac4g08707 Beta vulgaris HOM05D000107 ORTHO05D000062 1.7e-06 57.0 126 30.2
EL10Ac4g08893 Beta vulgaris HOM05D000107 ORTHO05D000062 1.7e-06 57.0 125 30.4
ECA096G0002 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.7e-06 57.0 107 35.5
ECA164G0001 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.7e-06 57.0 107 35.5
ECA233G5567 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.7e-06 57.0 107 35.5
ECA246G3624 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.7e-06 57.0 107 35.5
ECA247G3079 Erigeron canadensis HOM05D000097 ORTHO05D000041 1.7e-06 57.0 107 35.5
CSS0000324 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.2e-06 56.6 101 38.6
Rhsim04G0055300 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.8e-06 55.8 58 43.1
TAR344G0006 Trochodendron aralioides HOM05D000107 ORTHO05D000062 5.0e-06 55.5 141 27.7
Aqoxy2G02171 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 6.5e-06 55.1 169 27.2
EL10Ac2g03157 Beta vulgaris HOM05D000107 ORTHO05D000062 6.5e-06 55.1 43 46.5
AUR62037786 Chenopodium quinoa HOM05D000107 ORTHO05D000062 6.5e-06 55.1 92 32.6
HanXRQChr03g0071531 Helianthus annuus HOM05D000107 ORTHO05D000062 6.5e-06 55.1 107 34.6
Rhsim07G0167400 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.5e-06 55.1 116 34.5
Aqoxy4G02090 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 8.5e-06 54.7 117 28.2
CSS0026161 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 8.5e-06 54.7 57 40.4
AUR62026468 Chenopodium quinoa HOM05D000107 ORTHO05D000062 8.5e-06 54.7 116 31.9
HanXRQChr05g0141801 Helianthus annuus HOM05D000107 ORTHO05D000062 8.5e-06 54.7 107 34.6
MBI19_g18418_MAGBIO Magnolia biondii HOM05D000107 ORTHO05D000062 8.5e-06 54.7 123 30.1
TAR165G0003 Trochodendron aralioides HOM05D000107 ORTHO05D000062 8.5e-06 54.7 137 26.3


User provided reference genes

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