Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_23805_v3 Cicer arietinum L. HOM05D007529 ORTHO05D007451 2.1e-143 512.3 253 100.0
Medtr1g041810 Medicago truncatula HOM05D007529 ORTHO05D007451 8.4e-108 394.0 254 77.6
TPR.G19652 Trifolium pratense HOM05D007529 ORTHO05D007451 8.7e-105 384.0 256 74.6
Glyma.02G191900 Glycine max HOM05D007529 ORTHO05D007451 2.6e-85 319.3 244 66.0
Lalb_Chr02g0156441 Lupinus albus HOM05D007529 ORTHO05D007451 2.0e-80 303.1 262 63.7
VMungo0720G2145 Vigna mungo HOM05D007529 ORTHO05D007451 2.7e-74 282.7 237 60.3
QL07p004579 Quercus lobata HOM05D007529 ORTHO05D007451 1.4e-73 280.4 249 55.8
MD14G1081300 Malus domestica HOM05D007529 ORTHO05D007451 7.2e-67 258.1 246 54.5
Atru.chr1.1251 Acer truncatum HOM05D007529 ORTHO05D007451 6.1e-66 255.0 246 54.5
Dinv30288 Davidia involucrata HOM05D007529 ORTHO05D007451 2.2e-63 246.5 244 52.5
Potri.006G044801 Populus trichocarpa HOM05D007529 ORTHO05D007451 2.8e-63 246.1 257 49.0
TWI74G0965 Tripterygium wilfordii HOM05D007529 ORTHO05D007451 8.2e-63 244.6 249 51.0
Prupe.7G049500 Prunus persica HOM05D007529 ORTHO05D007451 2.4e-62 243.0 250 52.0
ClCG04G003960 Citrullus lanatus HOM05D007529 ORTHO05D007451 4.1e-62 242.3 272 47.1
Phvul.007G249000 Phaseolus vulgaris HOM05D007529 ORTHO05D007451 1.2e-61 240.7 207 58.0
Manes.09G016732 Manihot esculenta HOM05D007529 ORTHO05D007451 4.5e-61 238.8 257 49.4
Manes.09G016600 Manihot esculenta HOM05D007529 ORTHO05D007451 7.7e-61 238.0 257 49.4
Sed0023165 Sechium edule HOM05D007529 ORTHO05D007451 1.7e-60 236.9 251 49.0
CANSAT80G2089 Cannabis sativa HOM05D007529 ORTHO05D007451 1.5e-59 233.8 256 51.2
SalBow1G4167 Salvia bowleyana HOM05D007529 ORTHO05D007451 2.5e-59 233.0 243 49.8
Eucgr.K01581 Eucalyptus grandis HOM05D007529 ORTHO05D007451 3.2e-59 232.6 236 48.7
CsaV3_4G021910 Cucumis sativus L. HOM05D007529 ORTHO05D007451 5.5e-59 231.9 272 45.6
Nn2g15054 Nelumbo nucifera HOM05D007529 ORTHO05D007451 5.5e-59 231.9 245 52.7
CANSAT80G1192 Cannabis sativa HOM05D007529 ORTHO05D007451 6.1e-58 228.4 257 51.0
Migut.K00115 Erythranthe guttata HOM05D007529 ORTHO05D007451 8.0e-58 228.0 246 49.6
FvH4_6g24810 Fragaria vesca HOM05D007529 ORTHO05D007451 1.4e-57 227.3 249 47.0
Gohir.A01G193700 Gossypium hirsutum HOM05D007529 ORTHO05D007451 1.4e-57 227.3 246 50.0
Sc19g0008410 Simmondsia chinensis HOM05D007529 ORTHO05D007451 1.4e-57 227.3 248 50.4
Gohir.D01G183900 Gossypium hirsutum HOM05D007529 ORTHO05D007451 1.8e-57 226.9 244 50.4
Gorai.002G227400 Gossypium raimondii HOM05D007529 ORTHO05D007451 4.0e-57 225.7 246 50.4
Solyc04g017670.3 Solanum lycopersicum HOM05D007529 ORTHO05D007451 4.0e-57 225.7 264 45.5
Sopen04g008750 Solanum pennellii HOM05D007529 ORTHO05D007451 5.2e-57 225.3 265 45.3
Nitab4.5_0011420g0010 Nicotiana tabacum HOM05D007529 ORTHO05D007451 6.8e-57 224.9 256 45.3
Sabra06G0031000 Salix brachista HOM05D005255 ORTHO05D006276 6.8e-57 224.9 246 46.3
MBI19_g17527_MAGBIO Magnolia biondii HOM05D007529 ORTHO05D007451 1.7e-55 220.3 251 47.4
Nitab4.5_0001618g0110 Nicotiana tabacum HOM05D007529 ORTHO05D007451 1.7e-55 220.3 246 45.5
Cfa016748 Carpinus fangiana HOM05D002613 ORTHO05D003140 2.8e-55 219.5 228 52.6
FAN17G0712 Fragaria x ananassa HOM05D007529 ORTHO05D007451 2.8e-55 219.5 255 45.9
MELO3C014209.2 Cucumis melo HOM05D007529 ORTHO05D007451 4.8e-55 218.8 264 43.6
Lsat_1_v5_gn_5_161020 Lactuca sativa HOM05D007529 ORTHO05D007451 4.8e-55 218.8 256 46.9
PGR142G2784 Punica granatum HOM05D007529 ORTHO05D007451 6.3e-55 218.4 246 47.6
RcHm_v2.0_Chr3g0484581 Rosa chinensis HOM05D007529 ORTHO05D007451 8.3e-55 218.0 242 46.7
COL.COLO4_30902 Corchorus olitorius HOM05D007529 ORTHO05D007451 2.4e-54 216.5 248 46.4
Haze_19755 Corylus avellana HOM05D007529 ORTHO05D007451 2.4e-54 216.5 226 50.4
Psat6g093280 Pisum sativum HOM05D007529 ORTHO05D007451 2.4e-54 216.5 155 71.6
Peaxi162Scf00130g00112 Petunia axillaris HOM05D007529 ORTHO05D007451 3.1e-54 216.1 250 44.0
ECA248G1753 Erigeron canadensis HOM05D007529 ORTHO05D007451 2.0e-53 213.4 254 44.5
FAN22G0252 Fragaria x ananassa HOM05D007529 ORTHO05D007451 7.7e-53 211.5 255 44.3
Actinidia38146 Actinidia chinensis HOM05D000001 ORTHO05D009995 1.3e-52 210.7 250 48.4
FvH4_4g15460 Fragaria vesca HOM05D007529 ORTHO05D007451 5.0e-52 208.8 254 44.9
FAN12G3128 Fragaria x ananassa HOM05D007529 ORTHO05D007451 1.9e-51 206.8 254 44.9
Ciclev10006854m.g Citrus clementina HOM05D007529 ORTHO05D007451 2.8e-50 203.0 250 47.2
HanXRQChr17g0545881 Helianthus annuus HOM05D007529 ORTHO05D007451 1.8e-49 200.3 262 42.4
FAN22G0851 Fragaria x ananassa HOM05D007529 ORTHO05D007451 3.0e-49 199.5 241 44.8
EL10Ac3g07171 Beta vulgaris HOM05D007529 ORTHO05D007451 4.0e-49 199.1 268 44.4
Potri.004G076800 Populus trichocarpa HOM05D007529 ORTHO05D007451 4.0e-49 199.1 255 42.7
FAN14G0143 Fragaria x ananassa HOM05D007529 ORTHO05D007451 5.7e-48 195.3 232 44.4
PSO384G2280 Papaver somniferum HOM05D007529 ORTHO05D007451 3.7e-47 192.6 275 41.1
Ah.13g076730 Amaranthus hybridus HOM05D007529 ORTHO05D007451 4.9e-47 192.2 247 43.7
HanXRQChr01g0008291 Helianthus annuus HOM05D007529 ORTHO05D007451 1.1e-46 191.0 246 43.1
DCAR_013619 Daucus carota HOM05D007529 ORTHO05D007451 3.1e-46 189.5 262 42.7
AUR62030393 Chenopodium quinoa HOM05D007529 ORTHO05D007451 2.0e-45 186.8 252 42.9
Cc06_g18420 Coffea canephora HOM05D007529 ORTHO05D007451 1.7e-44 183.7 245 42.4
Oeu008184.2 Olea europaea HOM05D005255 ORTHO05D006276 3.3e-43 179.5 211 46.0
FAN07G2804 Fragaria x ananassa HOM05D007529 ORTHO05D007451 1.2e-42 177.6 232 43.1
SGA_v2.0_scaffold21G09330 Striga asiatica HOM05D007529 ORTHO05D007451 2.0e-40 170.2 253 39.9
Haze_19770 Corylus avellana HOM05D007529 ORTHO05D007451 1.3e-39 167.5 169 49.7
CiPaw.09G042800 Carya illinoinensis HOM05D007529 ORTHO05D007451 3.7e-39 166.0 254 42.5
FvH4_4g15570 Fragaria vesca HOM05D007529 ORTHO05D007451 3.5e-37 159.5 184 46.7
Sabra04G0050900 Salix brachista HOM05D007529 ORTHO05D007451 1.0e-36 157.9 225 38.7
HPP92_011341 Vanilla planifolia HOM05D007529 ORTHO05D007451 2.3e-33 146.7 259 37.5
Nn1g04791 Nelumbo nucifera HOM05D007529 ORTHO05D007451 3.1e-33 146.4 242 39.3
THA.LOC104816403 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 8.9e-33 144.8 256 35.2
FvH4_2g38461 Fragaria vesca HOM05D007529 ORTHO05D007451 3.4e-32 142.9 186 41.4
Aqoxy7G01198 Aquilegia oxysepala HOM05D007529 ORTHO05D007451 7.5e-32 141.7 218 37.2
THA.LOC104825175 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 2.9e-31 139.8 246 37.4
Nitab4.5_0005195g0010 Nicotiana tabacum HOM05D007529 ORTHO05D007451 9.2e-30 134.8 255 33.7
arahy.Tifrunner.gnm1.ann1.5P9T4R Arachis hypogaea HOM05D007529 ORTHO05D007451 2.3e-28 130.2 135 59.3
unitig_899.g15088 Utricularia gibba HOM05D007529 ORTHO05D007451 3.9e-28 129.4 171 41.5
Potri.004G077301 Populus trichocarpa HOM05D007529 ORTHO05D007451 8.6e-28 128.3 156 43.6
Nitab4.5_0000826g0010 Nicotiana tabacum HOM05D007529 ORTHO05D007451 3.6e-26 122.9 144 43.1
CARHR209270 Cardamine hirsuta HOM05D005503 ORTHO05D007451 7.5e-24 115.2 250 32.4
AUR62026141 Chenopodium quinoa HOM05D007529 ORTHO05D007451 3.7e-23 112.8 139 43.9
HPP92_011264 Vanilla planifolia HOM05D007529 ORTHO05D007451 4.1e-22 109.4 179 38.5
Carub.0006s0294 Capsella rubella HOM05D005503 ORTHO05D007451 2.1e-21 107.1 251 31.5
Zm00001eb150670 Zea mays HOM05D007529 ORTHO05D007451 3.5e-21 106.3 266 36.5
AL6G13600 Arabidopsis lyrata HOM05D005503 ORTHO05D007451 4.6e-21 105.9 251 31.1
Os01g0800900 Oryza sativa ssp. japonica HOM05D007529 ORTHO05D007451 6.0e-21 105.5 264 34.1
CDE11G0566 Ceratophyllum demersum HOM05D007529 ORTHO05D007451 2.5e-19 100.1 177 31.1
AT5G04010 Arabidopsis thaliana HOM05D005503 ORTHO05D007451 7.3e-19 98.6 250 29.2
FAN12G3498 Fragaria x ananassa HOM05D007529 ORTHO05D007451 1.2e-18 97.8 163 36.8
SEGI_22599 Sequoiadendron giganteum HOM05D007529 ORTHO05D007451 2.1e-18 97.1 258 30.6
Nn1g01084 Nelumbo nucifera HOM05D007529 ORTHO05D007451 2.8e-18 96.7 93 58.1
Thhalv10027472m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 1.4e-17 94.4 254 29.5
Aa31LG6G5380 Aethionema arabicum HOM05D005503 ORTHO05D007451 2.4e-17 93.6 257 30.4
C08p39400 Brassica napus HOM05D005503 ORTHO05D007451 3.1e-17 93.2 251 30.7
FAN17G2871 Fragaria x ananassa HOM05D007529 ORTHO05D011815 3.1e-17 93.2 99 49.5
A09p56630 Brassica napus HOM05D005503 ORTHO05D007451 1.5e-16 90.9 251 29.5
BraA09t41054Z Brassica rapa HOM05D005503 ORTHO05D007451 1.5e-16 90.9 251 29.5
Thhalv10015413m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 3.4e-16 89.7 257 29.6
A09p56430 Brassica napus HOM05D005503 ORTHO05D007451 5.8e-16 89.0 251 31.9
BraA09t41037Z Brassica rapa HOM05D005503 ORTHO05D007451 5.8e-16 89.0 251 31.9
Thhalv10015674m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 5.8e-16 89.0 257 29.6
C08p39580 Brassica napus HOM05D005503 ORTHO05D007451 7.6e-16 88.6 251 29.5
BcaC02g08721 Brassica carinata HOM05D005503 ORTHO05D007451 9.9e-16 88.2 251 30.7
THA.LOC104825174 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 1.3e-15 87.8 130 35.4
BcaC07g40964 Brassica carinata HOM05D005503 ORTHO05D007451 3.8e-15 86.3 251 29.1
Thhalv10023018m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 4.9e-15 85.9 258 28.3
BcaC07g40948 Brassica carinata HOM05D005503 ORTHO05D007451 6.4e-15 85.5 251 31.1
BolC8t51514H Brassica oleracea HOM05D005503 ORTHO05D007451 6.4e-15 85.5 251 31.1
C04p51340 Brassica napus HOM05D005503 ORTHO05D007451 8.4e-15 85.1 250 30.0
Thhalv10027188m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 8.4e-15 85.1 249 30.5
FAN22G2112 Fragaria x ananassa HOM05D007529 ORTHO05D007451 2.4e-14 83.6 86 51.2
BolC4t26724H Brassica oleracea HOM05D005503 ORTHO05D007451 3.2e-14 83.2 251 30.3
FvH4_4g15602 Fragaria vesca HOM05D007529 ORTHO05D007451 3.2e-14 83.2 164 34.8
ClCG04G003940 Citrullus lanatus HOM05D007529 ORTHO05D007451 5.4e-14 82.4 84 51.2
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 1.6e-13 80.9 188 33.5
Aa31LG6G5360 Aethionema arabicum HOM05D005503 ORTHO05D007451 2.7e-13 80.1 263 29.3
Sp6g38750 Schrenkiella parvula HOM05D005503 ORTHO05D007451 6.0e-13 79.0 252 29.0
CsaV3_4G021970 Cucumis sativus L. HOM05D007529 ORTHO05D007451 3.0e-12 76.6 75 52.0
FAN17G0844 Fragaria x ananassa HOM05D007529 ORTHO05D007451 3.9e-12 76.3 98 40.8
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 5.1e-12 75.9 188 32.4
MELO3C014210.2 Cucumis melo HOM05D007529 ORTHO05D007451 8.7e-12 75.1 76 51.3
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 1.9e-11 73.9 188 31.9
Cpa.g.sc5.218 Carica papaya HOM05D007529 ORTHO05D007451 1.9e-11 73.9 76 48.7
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 4.3e-11 72.8 188 31.4
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 8.1e-10 68.6 157 34.4
BolC8t51531H Brassica oleracea HOM05D005503 ORTHO05D007451 2.4e-09 67.0 167 31.1
Cpa.g.sc5.217 Carica papaya HOM05D007529 ORTHO05D007451 9.0e-09 65.1 68 52.9
SMO340G0132 Selaginella moellendorffii HOM05D027965 ORTHO05D007451 3.4e-08 63.2 298 23.5


User provided reference genes

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