Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_23758_v3 Cicer arietinum L. HOM05D002977 ORTHO05D003225 2.7e-223 778.5 430 100.0
Psat4g151680 Pisum sativum HOM05D002977 ORTHO05D003225 3.2e-160 568.9 438 73.3
Medtr8g032770 Medicago truncatula HOM05D002977 ORTHO05D003225 4.5e-154 548.5 438 68.3
VMungo0331G1467 Vigna mungo HOM05D002977 ORTHO05D003225 1.6e-106 390.6 438 56.2
Glyma.07G079500 Glycine max HOM05D002977 ORTHO05D003225 3.0e-105 386.3 439 58.3
Glyma.03G017800 Glycine max HOM05D002977 ORTHO05D003225 3.3e-104 382.9 442 55.7
Lj3g0026127 Lotus japonicus HOM05D002977 ORTHO05D003225 7.3e-104 381.7 452 56.9
Lalb_Chr10g0097561 Lupinus albus HOM05D002977 ORTHO05D003225 9.7e-80 301.6 459 49.2
arahy.Tifrunner.gnm1.ann1.YQQF81 Arachis hypogaea HOM05D002977 ORTHO05D003225 1.1e-75 288.1 465 46.9
Phvul.010G089700 Phaseolus vulgaris HOM05D002977 ORTHO05D003225 1.4e-75 287.7 355 53.8
arahy.Tifrunner.gnm1.ann1.XNH79U Arachis hypogaea HOM05D002977 ORTHO05D003225 6.1e-74 282.3 465 46.2
Cpa.g.c33531 Carica papaya HOM05D002977 ORTHO05D003225 3.0e-49 200.3 452 39.4
RcHm_v2.0_Chr1g0352121 Rosa chinensis HOM05D002977 ORTHO05D003225 2.4e-46 190.7 457 38.7
Atru.chr5.400 Acer truncatum HOM05D002977 ORTHO05D003225 4.1e-46 189.9 454 37.4
QL08p050716 Quercus lobata HOM05D002977 ORTHO05D003225 5.4e-46 189.5 441 36.5
FAN10G0205 Fragaria x ananassa HOM05D002977 ORTHO05D003225 3.8e-44 183.3 451 37.3
FAN06G3334 Fragaria x ananassa HOM05D002977 ORTHO05D003225 1.2e-42 178.3 451 38.4
FAN10G1938 Fragaria x ananassa HOM05D002977 ORTHO05D003225 1.6e-42 177.9 452 36.5
FvH4_7g12980 Fragaria vesca HOM05D002977 ORTHO05D003225 3.6e-42 176.8 452 37.6
MD07G1125600 Malus domestica HOM05D002977 ORTHO05D003225 1.4e-41 174.9 476 37.8
Potri.002G152700 Populus trichocarpa HOM05D002977 ORTHO05D003225 1.4e-41 174.9 485 34.4
Thecc.01G369200 Theobroma cacao HOM05D002977 ORTHO05D003225 5.2e-41 172.9 465 34.8
MD01G1047600 Malus domestica HOM05D002977 ORTHO05D003225 8.8e-41 172.2 466 36.7
AL6G52680 Arabidopsis lyrata HOM05D002977 ORTHO05D003225 5.7e-40 169.5 447 34.2
FAN06G4128 Fragaria x ananassa HOM05D002977 ORTHO05D003225 5.7e-40 169.5 463 37.1
CANSAT56G0238 Cannabis sativa HOM05D002977 ORTHO05D003225 2.8e-39 167.2 467 34.5
Thhalv10029270m.g Eutrema salsugineum HOM05D002977 ORTHO05D003225 3.7e-39 166.8 452 35.6
Actinidia33447 Actinidia chinensis HOM05D002977 ORTHO05D003225 8.3e-39 165.6 436 34.2
COL.COLO4_06963 Corchorus olitorius HOM05D002977 ORTHO05D003225 1.4e-38 164.9 478 33.3
Potri.014G077400 Populus trichocarpa HOM05D002977 ORTHO05D003225 1.8e-38 164.5 491 34.6
Sabra02G0121100 Salix brachista HOM05D002977 ORTHO05D003225 3.1e-38 163.7 484 33.1
Carub.0006s3643 Capsella rubella HOM05D002977 ORTHO05D003225 5.4e-38 162.9 444 34.0
Haze_15232 Corylus avellana HOM05D002977 ORTHO05D003225 2.0e-37 161.0 443 37.0
CSS0040991 Camellia sinensis var. sinensis HOM05D002977 ORTHO05D003225 2.7e-37 160.6 432 31.5
AT4G00770 Arabidopsis thaliana HOM05D002977 ORTHO05D003225 1.0e-36 158.7 441 34.2
FAN01G0110 Fragaria x ananassa HOM05D002977 ORTHO05D003225 2.9e-36 157.1 473 35.5
TWI59G0633 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 2.9e-36 157.1 454 37.2
Prupe.2G153900 Prunus persica HOM05D002977 ORTHO05D003225 6.6e-36 156.0 479 34.7
Ciclev10020246m.g Citrus clementina HOM05D002977 ORTHO05D003225 8.6e-36 155.6 467 37.5
Duzib138G0317 Durio zibethinus HOM05D002977 ORTHO05D003225 1.1e-35 155.2 499 31.9
Cfa004177 Carpinus fangiana HOM05D002977 ORTHO05D003225 1.9e-35 154.5 444 34.9
Aqoxy7G00463 Aquilegia oxysepala HOM05D002977 ORTHO05D003225 5.5e-35 152.9 468 33.1
BcaB01g02155 Brassica carinata HOM05D002977 ORTHO05D003225 7.2e-35 152.5 431 31.1
Hma1.2p1_0132F.1_g060810 Hydrangea macrophylla HOM05D002977 ORTHO05D003225 3.6e-34 150.2 447 34.0
CARHR248960 Cardamine hirsuta HOM05D002977 ORTHO05D003225 8.0e-34 149.1 447 35.3
Peaxi162Scf00021g00041 Petunia axillaris HOM05D002977 ORTHO05D003225 1.0e-33 148.7 462 33.8
A03p32000 Brassica napus HOM05D002977 ORTHO05D003225 4.0e-33 146.7 429 31.0
BraA03t12372Z Brassica rapa HOM05D002977 ORTHO05D003225 4.0e-33 146.7 429 31.5
BcaC01g06858 Brassica carinata HOM05D002977 ORTHO05D003225 6.8e-33 146.0 431 30.2
Sp6g00770 Schrenkiella parvula HOM05D002977 ORTHO05D003225 8.9e-33 145.6 447 31.3
Sabra14G0054900 Salix brachista HOM05D002977 ORTHO05D003225 1.5e-32 144.8 477 32.5
vmacro20976 Vaccinium macrocarpon HOM05D002977 ORTHO05D003225 4.4e-32 143.3 431 29.7
C03p39020 Brassica napus HOM05D002977 ORTHO05D003225 5.7e-32 142.9 431 29.9
BolC3t16174H Brassica oleracea HOM05D002977 ORTHO05D003225 5.7e-32 142.9 431 29.9
Nn6g34271 Nelumbo nucifera HOM05D002977 ORTHO05D003225 9.8e-32 142.1 492 32.9
Nn1g01342 Nelumbo nucifera HOM05D002977 ORTHO05D003225 1.7e-31 141.4 493 33.1
Dinv37695 Davidia involucrata HOM05D002977 ORTHO05D003225 7.0e-30 136.0 478 31.2
Peaxi162Scf00233g00015 Petunia axillaris HOM05D002977 ORTHO05D003225 7.0e-30 136.0 439 29.6
GSVIVG01027598001 Vitis vinifera HOM05D002977 ORTHO05D003225 7.0e-30 136.0 449 30.5
PGSC0003DMG400017053 Solanum tuberosum HOM05D002977 ORTHO05D003225 9.2e-30 135.6 434 29.5
THA.LOC104801463 Tarenaya hassleriana HOM05D002977 ORTHO05D003225 1.6e-29 134.8 457 31.9
Sopen01g037600 Solanum pennellii HOM05D002977 ORTHO05D003225 1.7e-28 131.3 434 29.3
Lsat_1_v5_gn_7_8261 Lactuca sativa HOM05D002977 ORTHO05D003225 2.3e-28 131.0 436 30.0
Manes.05G040400 Manihot esculenta HOM05D002977 ORTHO05D003225 2.3e-28 131.0 441 34.5
Dinv43754 Davidia involucrata HOM05D002977 ORTHO05D003225 3.9e-28 130.2 453 31.1
Manes.01G067700 Manihot esculenta HOM05D002977 ORTHO05D003225 1.1e-27 128.6 477 28.7
Aa31LG5G240 Aethionema arabicum HOM05D002977 ORTHO05D003225 1.9e-27 127.9 486 28.6
Nitab4.5_0004550g0040 Nicotiana tabacum HOM05D002977 ORTHO05D003225 1.6e-26 124.8 458 32.1
Solyc01g091830.3 Solanum lycopersicum HOM05D002977 ORTHO05D003225 2.1e-26 124.4 439 28.5
Gorai.004G156200 Gossypium raimondii HOM05D002977 ORTHO05D003225 6.2e-26 122.9 447 28.9
Eucgr.E00281 Eucalyptus grandis HOM05D002977 ORTHO05D003225 1.0e-25 122.1 439 31.2
Gohir.D08G150500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 1.4e-25 121.7 447 28.9
CAN.G170.54 Capsicum annuum HOM05D002977 ORTHO05D003225 8.9e-25 119.0 454 32.2
TAR629G3293 Trochodendron aralioides HOM05D002977 ORTHO05D003225 1.2e-24 118.6 414 37.9
Gohir.A08G129200 Gossypium hirsutum HOM05D002977 ORTHO05D003225 1.5e-24 118.2 445 29.0
TWI81G0253 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 5.8e-24 116.3 485 30.5
CiPaw.11G141500 Carya illinoinensis HOM05D002977 ORTHO05D003225 1.7e-23 114.8 491 28.7
Cc02_g37200 Coffea canephora HOM05D002977 ORTHO05D003225 3.7e-23 113.6 436 27.8
Duzib133G0091 Durio zibethinus HOM05D002977 ORTHO05D003225 4.1e-22 110.2 213 43.2
Gohir.A08G178500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 4.1e-22 110.2 490 30.0
MBI12_g11809_MAGBIO Magnolia biondii HOM05D002977 ORTHO05D003225 7.0e-22 109.4 471 28.9
Thecc.03G270800 Theobroma cacao HOM05D002977 ORTHO05D003225 9.2e-22 109.0 510 28.6
Prupe.5G089800 Prunus persica HOM05D002977 ORTHO05D003225 1.2e-21 108.6 479 27.8
Haze_08955 Corylus avellana HOM05D002977 ORTHO05D003225 1.6e-21 108.2 486 28.8
Gorai.004G207700 Gossypium raimondii HOM05D002977 ORTHO05D003225 2.0e-21 107.8 494 28.9
Actinidia02049 Actinidia chinensis HOM05D002977 ORTHO05D003225 2.7e-21 107.5 471 29.7
HanXRQChr06g0168991 Helianthus annuus HOM05D002977 ORTHO05D003225 2.7e-21 107.5 359 27.6
Gohir.D08G197000 Gossypium hirsutum HOM05D002977 ORTHO05D003225 3.5e-21 107.1 494 30.4
Manes.02G027900 Manihot esculenta HOM05D002977 ORTHO05D003225 4.6e-21 106.7 484 28.7
TWI60G0323 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 6.0e-21 106.3 494 28.1
MSTRG.20788 Avicennia marina HOM05D002977 ORTHO05D003225 2.3e-20 104.4 423 31.7
Nitab4.5_0000134g0230 Nicotiana tabacum HOM05D002977 ORTHO05D003225 3.0e-20 104.0 441 29.9
ECA236G0338 Erigeron canadensis HOM05D002977 ORTHO05D003225 3.9e-20 103.6 388 28.1
Oeu059227.1 Olea europaea HOM05D002977 ORTHO05D003225 3.9e-20 103.6 445 32.1
Oeu059228.1 Olea europaea HOM05D002977 ORTHO05D003225 3.9e-20 103.6 445 32.1
PGR042G2435 Punica granatum HOM05D002977 ORTHO05D003225 5.0e-20 103.2 449 28.1
DCAR_008585 Daucus carota HOM05D002977 ORTHO05D003225 1.1e-19 102.1 423 29.1
QL12p017099 Quercus lobata HOM05D002977 ORTHO05D003225 1.9e-19 101.3 504 27.0
Cfa012096 Carpinus fangiana HOM05D002524 ORTHO05D002718 4.3e-19 100.1 487 26.7
Duzib084G1184 Durio zibethinus HOM05D002977 ORTHO05D003225 4.3e-19 100.1 509 27.7
RcHm_v2.0_Chr7g0199421 Rosa chinensis HOM05D002977 ORTHO05D003225 4.3e-19 100.1 504 26.0
CiPaw.02G024700 Carya illinoinensis HOM05D002977 ORTHO05D003225 4.7e-18 96.7 217 35.9
Sabra03G0085100 Salix brachista HOM05D002977 ORTHO05D003225 8.1e-18 95.9 488 27.7
Duzib205G0359 Durio zibethinus HOM05D002977 ORTHO05D003225 1.1e-17 95.5 499 28.9
Nitab4.5_0003356g0060 Nicotiana tabacum HOM05D002977 ORTHO05D003225 1.1e-17 95.5 433 29.8
SalBow3G1388 Salvia bowleyana HOM05D002977 ORTHO05D003225 2.3e-17 94.4 423 27.7
TWI14G0163 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 3.1e-17 94.0 458 28.8
SGA_v2.0_scaffold286G47104 Striga asiatica HOM05D002977 ORTHO05D003225 5.2e-17 93.2 445 26.5
Cc08_g13950 Coffea canephora HOM05D002977 ORTHO05D003225 6.8e-17 92.8 492 25.4
Potri.001G110900 Populus trichocarpa HOM05D002977 ORTHO05D003225 6.8e-17 92.8 489 27.0
Potri.003G121100 Populus trichocarpa HOM05D002977 ORTHO05D003225 4.4e-16 90.1 488 27.5
Sabra01G0084500 Salix brachista HOM05D002977 ORTHO05D003225 5.8e-16 89.7 456 25.4
Atru.chr9.1537 Acer truncatum HOM05D002977 ORTHO05D003225 1.3e-15 88.6 489 27.2
Manes.01G262800 Manihot esculenta HOM05D002977 ORTHO05D003225 2.2e-15 87.8 433 28.2
CsaV3_5G003260 Cucumis sativus L. HOM05D002977 ORTHO05D003225 8.3e-15 85.9 481 24.5
MBI04_g42596_MAGBIO Magnolia biondii HOM05D002977 ORTHO05D003225 1.1e-14 85.5 461 26.0
Ah.16g108930 Amaranthus hybridus HOM05D002977 ORTHO05D003225 1.4e-14 85.1 279 34.4
CiPaw.12G098800 Carya illinoinensis HOM05D002977 ORTHO05D003225 5.4e-14 83.2 498 27.1
Ah.02g116430 Amaranthus hybridus HOM05D002977 ORTHO05D003225 7.1e-14 82.8 489 27.8
DCAR_006762 Daucus carota HOM05D002977 ORTHO05D003225 1.2e-13 82.0 393 26.2
MELO3C005628.2 Cucumis melo HOM05D002977 ORTHO05D003225 1.6e-13 81.6 483 24.8
EL10Ac1g00967 Beta vulgaris HOM05D002977 ORTHO05D003225 2.1e-13 81.3 303 32.0
COL.COLO4_05272 Corchorus olitorius HOM05D002977 ORTHO05D003225 2.7e-13 80.9 480 28.1
AUR62010660 Chenopodium quinoa HOM05D002977 ORTHO05D003225 6.0e-13 79.7 472 25.2
ClCG01G003130 Citrullus lanatus HOM05D002977 ORTHO05D003225 7.8e-13 79.3 448 23.4
PSO478G2989 Papaver somniferum HOM05D002977 ORTHO05D003225 1.3e-12 78.6 553 24.2
PSO782G0819 Papaver somniferum HOM05D002977 ORTHO05D003225 1.3e-12 78.6 553 26.6
PGSC0003DMG400022757 Solanum tuberosum HOM05D002977 ORTHO05D003225 1.7e-12 78.2 505 26.5
TPR.G37675 Trifolium pratense HOM05D002977 ORTHO05D003225 2.3e-12 77.8 451 25.5
FAN04G2551 Fragaria x ananassa HOM05D002524 ORTHO05D002718 3.9e-12 77.0 530 24.9
Sopen08g028630 Solanum pennellii HOM05D002977 ORTHO05D003225 3.9e-12 77.0 492 25.4
Medtr4g102650 Medicago truncatula HOM05D002977 ORTHO05D003225 5.1e-12 76.6 443 26.2
Peaxi162Scf00714g00621 Petunia axillaris HOM05D002977 ORTHO05D003225 5.1e-12 76.6 484 25.4
CAN.G981.38 Capsicum annuum HOM05D002977 ORTHO05D003225 8.6e-12 75.9 486 28.4
MSTRG.25572 Avicennia marina HOM05D002977 ORTHO05D003225 1.1e-11 75.5 487 24.4
Hund28360 Selenicereus undatus HOM05D002977 ORTHO05D003225 1.1e-11 75.5 468 28.0
Hund28364 Selenicereus undatus HOM05D002977 ORTHO05D003225 1.1e-11 75.5 468 28.0
Lj4g0001816 Lotus japonicus HOM05D002977 ORTHO05D003225 1.5e-11 75.1 437 26.5
Ciclev10023310m.g Citrus clementina HOM05D002977 ORTHO05D003225 1.9e-11 74.7 220 29.1
Psat4g067560 Pisum sativum HOM05D002977 ORTHO05D003225 1.9e-11 74.7 445 24.7
FAN13G0210 Fragaria x ananassa HOM05D002524 ORTHO05D002718 2.5e-11 74.3 490 25.9
Migut.A00919 Erythranthe guttata HOM05D002977 ORTHO05D003225 4.3e-11 73.6 464 23.5
FvH4_5g01430 Fragaria vesca HOM05D002977 ORTHO05D003225 4.3e-11 73.6 516 24.2
Migut.B01683 Erythranthe guttata HOM05D002977 ORTHO05D003225 7.3e-11 72.8 297 32.7
Hund16963 Selenicereus undatus HOM05D002977 ORTHO05D003225 7.3e-11 72.8 277 33.2
VMungo1215G3066 Vigna mungo HOM05D002977 ORTHO05D003225 7.3e-11 72.8 457 25.4
Nitab4.5_0011100g0010 Nicotiana tabacum HOM05D002977 ORTHO05D003225 9.5e-11 72.4 505 28.7
ClCG05G001920 Citrullus lanatus HOM05D002977 ORTHO05D003225 1.2e-10 72.0 429 30.5
Migut.E01299 Erythranthe guttata HOM05D002977 ORTHO05D003225 1.2e-10 72.0 470 24.5
Ca_20242_v3 Cicer arietinum L. HOM05D002977 ORTHO05D003225 1.6e-10 71.6 441 26.5
Ca_29496_v3 Cicer arietinum L. HOM05D002977 ORTHO05D003225 1.6e-10 71.6 441 26.5
ECA233G2885 Erigeron canadensis HOM05D002977 ORTHO05D003225 2.8e-10 70.9 471 24.4
Oeu024421.1 Olea europaea HOM05D002977 ORTHO05D003225 2.8e-10 70.9 266 35.3
CANSAT21G2154 Cannabis sativa HOM05D002977 ORTHO05D003225 3.6e-10 70.5 500 24.2
DCAR_006904 Daucus carota HOM05D002977 ORTHO05D003225 3.6e-10 70.5 282 31.6
FAN18G2499 Fragaria x ananassa HOM05D002524 ORTHO05D002718 8.1e-10 69.3 526 24.0
SGA_v2.0_scaffold196G40889 Striga asiatica HOM05D002977 ORTHO05D003225 8.1e-10 69.3 467 24.6
Solyc08g080280.3 Solanum lycopersicum HOM05D002977 ORTHO05D003225 1.1e-09 68.9 492 23.8
Nitab4.5_0010430g0070 Nicotiana tabacum HOM05D002977 ORTHO05D003225 1.4e-09 68.6 224 36.2
Ah.12g057650 Amaranthus hybridus HOM05D002977 ORTHO05D003225 1.8e-09 68.2 444 25.7
Eucgr.E00527 Eucalyptus grandis HOM05D002977 ORTHO05D003225 1.8e-09 68.2 123 36.6
PGR042G2476 Punica granatum HOM05D002977 ORTHO05D003225 3.1e-09 67.4 518 24.9
Dinv39013 Davidia involucrata HOM05D002977 ORTHO05D003225 4.0e-09 67.0 469 27.1
Oeu024422.1 Olea europaea HOM05D002977 ORTHO05D003225 4.0e-09 67.0 266 34.6
SGA_v2.0_scaffold153G37063 Striga asiatica HOM05D002977 ORTHO05D003225 5.2e-09 66.6 214 28.5
Lsat_1_v5_gn_6_13021 Lactuca sativa HOM05D002977 ORTHO05D003225 8.9e-09 65.9 476 24.6
Lalb_Chr05g0225091 Lupinus albus HOM05D002977 ORTHO05D003225 8.9e-09 65.9 465 24.9
Glyma.17G132000 Glycine max HOM05D002977 ORTHO05D003225 2.0e-08 64.7 466 25.3
Nitab4.5_0001714g0160 Nicotiana tabacum HOM05D002977 ORTHO05D003225 5.8e-08 63.2 504 28.4
Glyma.05G050000 Glycine max HOM05D002977 ORTHO05D003225 9.9e-08 62.4 466 24.0
arahy.Tifrunner.gnm1.ann1.ELA92E Arachis hypogaea HOM05D002977 ORTHO05D003225 1.3e-07 62.0 218 28.0
Hma1.2p1_0371F.1_g138190 Hydrangea macrophylla HOM05D002977 ORTHO05D003225 1.7e-07 61.6 153 26.8
Phvul.003G212900 Phaseolus vulgaris HOM05D002977 ORTHO05D003225 3.7e-07 60.5 456 23.5
Gorai.008G243500 Gossypium raimondii HOM05D002977 ORTHO05D003225 6.4e-07 59.7 307 27.4
AUR62033369 Chenopodium quinoa HOM05D049868 ORTHO05D003225 8.4e-07 59.3 230 28.7
Gohir.A12G224700 Gossypium hirsutum HOM05D002977 ORTHO05D003225 1.1e-06 58.9 317 26.8
FAN08G2595 Fragaria x ananassa HOM05D002524 ORTHO05D002718 1.9e-06 58.2 517 23.4
CARHR230080 Cardamine hirsuta HOM05D002977 ORTHO05D003225 2.4e-06 57.8 445 22.2
MELO3C006152.2 Cucumis melo HOM05D002977 ORTHO05D003225 2.4e-06 57.8 188 38.8
Gohir.D12G227500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 3.2e-06 57.4 308 26.9
CsaV3_3G009320 Cucumis sativus L. HOM05D002977 ORTHO05D003225 4.1e-06 57.0 431 28.1
arahy.Tifrunner.gnm1.ann1.BQI3IB Arachis hypogaea HOM05D002977 ORTHO05D003225 7.1e-06 56.2 219 27.9
Lalb_Chr16g0379981 Lupinus albus HOM05D002977 ORTHO05D003225 7.1e-06 56.2 412 22.8


User provided reference genes

Program Settings