Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_23693_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 9.6e-228 793.1 392 100.0
Rhsim04G0073100 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.3e-104 383.3 474 45.8
Ca_08210_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 2.5e-103 379.8 272 68.8
TPR.G33522 Trifolium pratense HOM05D005276 ORTHO05D006813 1.9e-98 363.6 272 64.0
Psat0s876g0120 Pisum sativum HOM05D005276 ORTHO05D006813 2.0e-95 353.6 273 62.3
Psat0s876g0040 Pisum sativum HOM05D005276 ORTHO05D006813 3.3e-95 352.8 273 62.6
Psat0s1021g0280 Pisum sativum HOM05D005276 ORTHO05D006813 3.8e-91 339.3 272 58.5
TPR.G33532 Trifolium pratense HOM05D005276 ORTHO05D006813 1.7e-83 313.9 272 57.4
Psat5g117800 Pisum sativum HOM05D005276 ORTHO05D006813 2.5e-82 310.1 272 56.6
Psat5g117840 Pisum sativum HOM05D005276 ORTHO05D006813 2.5e-82 310.1 272 56.6
Medtr0057s0170 Medicago truncatula HOM05D005276 ORTHO05D006813 1.5e-79 300.8 272 55.5
Medtr0057s0100 Medicago truncatula HOM05D005276 ORTHO05D006813 2.2e-78 297.0 272 54.8
Medtr6g040290 Medicago truncatula HOM05D005276 ORTHO05D006813 4.8e-78 295.8 273 54.2
Medtr7g103990 Medicago truncatula HOM05D005276 ORTHO05D006813 2.7e-76 290.0 274 54.0
Psat0s3494g0040 Pisum sativum HOM05D005276 ORTHO05D006813 3.5e-76 289.7 273 53.5
Psat1g110680 Pisum sativum HOM05D005276 ORTHO05D006813 3.5e-76 289.7 273 53.5
Phvul.007G275900 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.7e-68 263.5 269 48.0
Phvul.007G276500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.7e-68 263.5 271 48.0
Phvul.007G276000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.0e-67 261.5 271 48.3
VMungo0720G2128 Vigna mungo HOM05D005276 ORTHO05D006813 1.0e-67 261.5 271 48.0
Phvul.008G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 8.6e-67 258.5 269 47.2
Hma1.2p1_0472F.1_g160020 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.2e-65 254.6 275 49.1
Medtr8g038100 Medicago truncatula HOM05D005276 ORTHO05D006813 1.2e-65 254.6 272 48.2
Hma1.2p1_0370F.1_g137770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.8e-65 253.4 275 47.3
Medtr0695s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 4.7e-65 252.7 272 47.4
Hma1.2p1_0052F.1_g030780 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 8.0e-65 251.9 272 48.9
Hma1.2p1_0472F.1_g160005 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 8.0e-65 251.9 272 48.9
Phvul.007G276100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.3e-64 250.4 269 45.7
Phvul.007G276200 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.3e-64 250.4 269 45.0
Phvul.007G277100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.0e-64 249.6 269 46.1
VMungo0720G1899 Vigna mungo HOM05D005276 ORTHO05D006813 6.8e-64 248.8 269 45.7
Medtr8g038070 Medicago truncatula HOM05D005276 ORTHO05D006813 8.8e-64 248.4 272 46.7
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.5e-63 247.7 273 48.0
VMungo0720G3131 Vigna mungo HOM05D005276 ORTHO05D006813 1.5e-63 247.7 269 46.1
Phvul.007G275800 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.6e-63 246.9 268 46.6
VMungo0720G2700 Vigna mungo HOM05D005276 ORTHO05D006813 1.7e-62 244.2 265 45.7
Phvul.007G277000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.9e-62 242.7 195 55.4
Rhsim08G0006900 Rhododendron simsii HOM05D005276 ORTHO05D006813 4.1e-61 239.6 273 46.5
Actinidia07622 Actinidia chinensis HOM05D005276 ORTHO05D006813 5.4e-61 239.2 276 46.0
Phvul.007G275700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.0e-61 238.8 195 54.9
Phvul.009G133400 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.7e-60 236.9 269 44.2
Rhsim05G0197900 Rhododendron simsii HOM05D005276 ORTHO05D006813 5.9e-60 235.7 277 44.0
vmacro22834 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 2.9e-59 233.4 278 44.6
TWI23G0671 Tripterygium wilfordii HOM05D005276 ORTHO05D006813 5.0e-59 232.6 304 41.4
Rhsim05G0142600 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.1e-58 231.5 275 45.5
Medtr7g012000 Medicago truncatula HOM05D005276 ORTHO05D006813 3.3e-58 229.9 182 61.5
PGR031G1219 Punica granatum HOM05D005276 ORTHO05D006813 4.3e-58 229.6 266 45.9
Rhsim04G0165600 Rhododendron simsii HOM05D005276 ORTHO05D006813 7.3e-58 228.8 276 42.8
Hma1.2p1_0472F.1_g159990 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.6e-57 227.6 256 46.1
Phvul.007G276300 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.0e-56 224.9 269 41.3
RcHm_v2.0_Chr5g0076681 Rosa chinensis HOM05D005276 ORTHO05D006813 2.3e-56 223.8 276 44.6
EL10Ac3g05487 Beta vulgaris HOM05D005276 ORTHO05D006813 3.0e-56 223.4 199 54.3
Phvul.007G275600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.4e-55 219.9 273 43.2
Hma1.2p1_2291F.1_g319080 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 8.3e-54 215.3 174 58.6
PGR102G1949 Punica granatum HOM05D005276 ORTHO05D006813 5.0e-51 206.1 324 38.9
Ah.02g117180 Amaranthus hybridus HOM05D005276 ORTHO05D006813 8.6e-51 205.3 198 51.0
Phvul.007G263500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.5e-50 204.5 271 42.1
EL10Ac1g01354 Beta vulgaris HOM05D005276 ORTHO05D006813 1.9e-50 204.1 202 50.5
EL10Ac1g01356 Beta vulgaris HOM05D005276 ORTHO05D006813 1.9e-50 204.1 202 50.5
EL10Ac1g01358 Beta vulgaris HOM05D005276 ORTHO05D006813 1.9e-50 204.1 202 50.5
PGR102G3141 Punica granatum HOM05D005276 ORTHO05D006813 1.9e-50 204.1 279 42.3
AUR62016119 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.2e-49 201.4 274 41.2
Phvul.007G276401 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.2e-48 196.1 135 64.4
VMungo0720G1439 Vigna mungo HOM05D005276 ORTHO05D006813 5.2e-48 196.1 269 40.1
PGR102G1815 Punica granatum HOM05D005276 ORTHO05D006813 1.2e-47 194.9 209 49.8
EL10Ac1g01352 Beta vulgaris HOM05D005276 ORTHO05D006813 2.6e-47 193.7 195 48.7
Ah.10g029400 Amaranthus hybridus HOM05D005276 ORTHO05D006813 1.6e-44 184.5 198 46.0
AUR62014887 Chenopodium quinoa HOM05D005276 ORTHO05D006813 3.5e-44 183.3 273 38.5
CSS0029999 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 4.6e-44 183.0 142 62.0
Ca_03455_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 4.6e-44 183.0 269 40.1
Phvul.007G263700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.0e-43 181.8 268 39.6
vmacro00373 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 1.3e-43 181.4 164 55.5
Medtr4g102470 Medicago truncatula HOM05D005276 ORTHO05D006813 3.0e-43 180.3 170 54.1
Os04g0213100 Oryza sativa ssp. japonica HOM05D005276 ORTHO05D006813 3.0e-43 180.3 287 37.6
AUR62041391 Chenopodium quinoa HOM05D005276 ORTHO05D006813 5.0e-43 179.5 196 49.5
Medtr6g073540 Medicago truncatula HOM05D005276 ORTHO05D006813 8.6e-43 178.7 274 40.9
RcHm_v2.0_Chr5g0076491 Rosa chinensis HOM05D005276 ORTHO05D006813 1.5e-42 177.9 143 60.8
Ah.02g121010 Amaranthus hybridus HOM05D005276 ORTHO05D006813 1.9e-42 177.6 198 46.0
Psat0s971g0080 Pisum sativum HOM05D005276 ORTHO05D006813 9.5e-42 175.3 269 39.4
Medtr1g066530 Medicago truncatula HOM05D005276 ORTHO05D006813 4.7e-41 172.9 268 38.8
Lj3g0023477 Lotus japonicus HOM05D005276 ORTHO05D006813 1.1e-40 171.8 127 61.4
PGR102G2116 Punica granatum HOM05D005276 ORTHO05D006813 1.8e-40 171.0 166 50.6
AUR62014758 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.3e-40 170.6 144 55.6
Phvul.002G269700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 8.9e-40 168.7 145 53.8
Rhsim05G0197600 Rhododendron simsii HOM05D005276 ORTHO05D006813 3.4e-39 166.8 214 43.5
Phvul.007G276700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 9.9e-39 165.2 125 61.6
CSS0004680 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 3.7e-38 163.3 144 55.6
Hma1.2p1_0052F.1_g030770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.1e-37 161.8 201 42.8
Hma1.2p1_0472F.1_g160029 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.1e-37 161.8 201 42.8
Medtr6g072470 Medicago truncatula HOM05D005276 ORTHO05D006813 1.4e-37 161.4 248 40.3
Medtr6g048620 Medicago truncatula HOM05D005276 ORTHO05D006813 3.2e-37 160.2 273 34.4
Medtr6g048910 Medicago truncatula HOM05D005276 ORTHO05D006813 4.1e-37 159.8 272 36.8
Medtr6g045077 Medicago truncatula HOM05D005276 ORTHO05D006813 7.8e-36 155.6 271 35.1
TPR.G10459 Trifolium pratense HOM05D005276 ORTHO05D006813 7.8e-36 155.6 268 35.4
EL10Ac4g09362 Beta vulgaris HOM05D005276 ORTHO05D006813 2.3e-35 154.1 166 47.0
VMungo0720G2085 Vigna mungo HOM05D005276 ORTHO05D006813 1.1e-34 151.8 136 54.4
EL10Ac1g01353 Beta vulgaris HOM05D005276 ORTHO05D006813 4.3e-34 149.8 142 50.7
EL10Ac1g01355 Beta vulgaris HOM05D005276 ORTHO05D006813 4.3e-34 149.8 139 50.4
EL10Ac1g01357 Beta vulgaris HOM05D005276 ORTHO05D006813 4.3e-34 149.8 139 50.4
RcHm_v2.0_Chr5g0076401 Rosa chinensis HOM05D005276 ORTHO05D006813 4.7e-33 146.4 125 60.8
Medtr0807s0020 Medicago truncatula HOM05D005276 ORTHO05D006813 1.1e-32 145.2 269 33.8
EL10Ac2g04799 Beta vulgaris HOM05D005276 ORTHO05D006813 2.4e-32 144.1 166 43.4
Dinv42431 Davidia involucrata HOM05D005276 ORTHO05D006813 2.0e-31 141.0 185 43.2
Medtr0216s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 3.4e-31 140.2 241 32.8
Medtr6g048810 Medicago truncatula HOM05D005276 ORTHO05D006813 1.7e-30 137.9 382 25.7
EL10Ac2g04798 Beta vulgaris HOM05D005276 ORTHO05D006813 6.4e-30 136.0 168 42.9
RcHm_v2.0_Chr5g0076801 Rosa chinensis HOM05D005276 ORTHO05D006813 8.4e-30 135.6 124 54.8
EL10Ac1g02090 Beta vulgaris HOM05D005276 ORTHO05D006813 1.1e-29 135.2 195 41.0
EL10Ac1g02109 Beta vulgaris HOM05D005276 ORTHO05D006813 4.1e-29 133.3 195 41.5
TPR.G28516 Trifolium pratense HOM05D005276 ORTHO05D006813 1.6e-28 131.3 136 50.7
AUR62024089 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.0e-27 128.6 198 36.9
TPR.G33545 Trifolium pratense HOM05D005276 ORTHO05D006813 1.0e-27 128.6 172 41.9
Medtr6g048880 Medicago truncatula HOM05D005276 ORTHO05D006813 1.5e-26 124.8 180 41.1
Rhsim10G0134200 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.5e-26 124.0 167 37.7
Lj6C375G5 Lonicera japonica HOM05D005276 ORTHO05D001431 8.1e-25 119.0 127 47.2
vmacro13228 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 8.1e-25 119.0 152 44.7
EL10Ac1g02097 Beta vulgaris HOM05D005276 ORTHO05D006813 2.4e-24 117.5 172 41.3
Ah.16g101350 Amaranthus hybridus HOM05D005276 ORTHO05D038198 4.4e-23 113.2 304 29.9
AUR62016935 Chenopodium quinoa HOM05D005276 ORTHO05D006813 4.9e-22 109.8 129 48.1
Phvul.002G268600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 8.4e-22 109.0 175 38.3
Phvul.007G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.4e-21 108.2 117 45.3
Medtr6g049040 Medicago truncatula HOM05D005276 ORTHO05D006813 5.4e-21 106.3 159 38.4
AUR62037739 Chenopodium quinoa HOM05D005276 ORTHO05D038198 9.3e-21 105.5 279 30.1
Phvul.007G264000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.0e-20 102.8 123 45.5
TPR.G40462 Trifolium pratense HOM05D005276 ORTHO05D006813 4.3e-18 96.7 112 45.5
RcHm_v2.0_Chr5g0076541 Rosa chinensis HOM05D005276 ORTHO05D006813 2.1e-17 94.4 76 57.9
Lj6C426G9 Lonicera japonica HOM05D005276 ORTHO05D006813 3.1e-16 90.5 93 47.3
vmacro23329 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 9.0e-16 89.0 128 40.6
RcHm_v2.0_Chr5g0076341 Rosa chinensis HOM05D005276 ORTHO05D006813 5.8e-15 86.3 102 45.1
EL10Ac1g02098 Beta vulgaris HOM05D005276 ORTHO05D006813 3.9e-11 73.6 84 45.2
Psat1g051400 Pisum sativum HOM05D005276 ORTHO05D006813 1.3e-09 68.6 85 44.7
TPR.G33490 Trifolium pratense HOM05D005276 ORTHO05D006813 3.7e-09 67.0 88 43.2
TPR.G33511 Trifolium pratense HOM05D005276 ORTHO05D006813 1.4e-08 65.1 76 47.4
Dinv42430 Davidia involucrata HOM05D005276 ORTHO05D006813 6.9e-08 62.8 81 43.2
Dinv03816 Davidia involucrata HOM05D031496 ORTHO05D029219 4.5e-07 60.1 59 45.8


User provided reference genes

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