Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_23534_v3 Cicer arietinum L. HOM05D008889 ORTHO05D009956 5.9e-68 260.8 134 100.0
Phvul.008G023501 Phaseolus vulgaris HOM05D008889 ORTHO05D009956 3.0e-40 168.7 135 73.3
Lalb_Chr04g0258271 Lupinus albus HOM05D008889 ORTHO05D009956 9.8e-39 163.7 134 72.4
Glyma.08G254600 Glycine max HOM05D008889 ORTHO05D009956 4.9e-38 161.4 137 70.8
Lalb_Chr10g0092501 Lupinus albus HOM05D008889 ORTHO05D009956 5.4e-37 157.9 133 69.2
TPR.G3280 Trifolium pratense HOM05D008889 ORTHO05D009956 1.6e-36 156.4 141 72.3
Lj1g0003987 Lotus japonicus HOM05D008889 ORTHO05D009956 3.5e-36 155.2 135 69.6
Medtr7g017790 Medicago truncatula HOM05D008889 ORTHO05D009956 2.3e-35 152.5 137 70.1
Psat3g194040 Pisum sativum HOM05D008889 ORTHO05D009956 1.2e-28 130.2 140 61.4
Glyma.18G277500 Glycine max HOM05D008889 ORTHO05D009956 1.5e-26 123.2 108 71.3
Potri.004G108840 Populus trichocarpa HOM05D008889 ORTHO05D009956 3.7e-14 82.0 88 55.7
TWI60G1323 Tripterygium wilfordii HOM05D008889 ORTHO05D009956 4.1e-13 78.6 135 40.7
Sabra17G0089900 Salix brachista HOM05D008889 ORTHO05D009956 2.7e-12 75.9 131 42.7
Manes.02G062300 Manihot esculenta HOM05D008889 ORTHO05D009956 6.0e-12 74.7 134 42.5
Potri.017G107000 Populus trichocarpa HOM05D008889 ORTHO05D009956 6.0e-12 74.7 131 44.3
RcHm_v2.0_Chr2g0164181 Rosa chinensis HOM05D008889 ORTHO05D009956 6.0e-12 74.7 133 43.6
Ciclev10013380m.g Citrus clementina HOM05D008889 ORTHO05D009956 1.3e-11 73.6 121 49.6
FAN05G4365 Fragaria x ananassa HOM05D008889 ORTHO05D009956 2.3e-11 72.8 133 42.1
MD17G1069000 Malus domestica HOM05D008889 ORTHO05D009956 3.9e-11 72.0 123 42.3
FAN02G0304 Fragaria x ananassa HOM05D008889 ORTHO05D009956 6.6e-11 71.2 135 40.0
Prupe.3G245600 Prunus persica HOM05D008889 ORTHO05D009956 8.6e-11 70.9 133 39.8
Sabra04G0073700 Salix brachista HOM05D008889 ORTHO05D009956 1.1e-10 70.5 117 44.4
CiPaw.04G050600 Carya illinoinensis HOM05D008889 ORTHO05D009956 1.9e-10 69.7 136 44.1
FvH4_6g45950 Fragaria vesca HOM05D008889 ORTHO05D009956 3.3e-10 68.9 135 39.3
FAN09G2052 Fragaria x ananassa HOM05D008889 ORTHO05D009956 3.3e-10 68.9 135 39.3
FAN14G5446 Fragaria x ananassa HOM05D008889 ORTHO05D009956 3.3e-10 68.9 135 39.3
Duzib133G1477 Durio zibethinus HOM05D008889 ORTHO05D009956 4.3e-10 68.6 145 42.8
QL02p063786 Quercus lobata HOM05D009227 ORTHO05D009956 5.6e-10 68.2 96 46.9
Lsat_1_v5_gn_4_113140 Lactuca sativa HOM05D038017 ORTHO05D009802 7.3e-10 67.8 85 45.9
arahy.Tifrunner.gnm1.ann1.II05IL Arachis hypogaea HOM05D008889 ORTHO05D009956 3.6e-09 65.5 47 68.1
Thecc.04G112500 Theobroma cacao HOM05D008889 ORTHO05D009956 4.7e-09 65.1 96 44.8
CANSAT64G2743 Cannabis sativa HOM05D008889 ORTHO05D009956 6.2e-09 64.7 119 41.2
Manes.01G105700 Manihot esculenta HOM05D008889 ORTHO05D009956 3.1e-08 62.4 127 39.4
Duzib138G0287 Durio zibethinus HOM05D008889 ORTHO05D009956 6.8e-08 61.2 112 41.1
Gorai.004G064000 Gossypium raimondii HOM05D009227 ORTHO05D009956 6.8e-08 61.2 79 49.4
BcaB07g30061 Brassica carinata HOM05D009227 ORTHO05D009956 8.9e-08 60.8 78 47.4
unitig_744.g24288 Utricularia gibba HOM05D009227 ORTHO05D009956 2.0e-07 59.7 106 39.6
C02p56090 Brassica napus HOM05D009227 ORTHO05D009956 3.4e-07 58.9 78 46.2
BolC2t11666H Brassica oleracea HOM05D009227 ORTHO05D009956 3.4e-07 58.9 78 46.2
A02p37090 Brassica napus HOM05D009227 ORTHO05D009956 4.4e-07 58.5 78 46.2
BraA02t08695Z Brassica rapa HOM05D009227 ORTHO05D009956 4.4e-07 58.5 78 46.2
Duzib084G1352 Durio zibethinus HOM05D008563 ORTHO05D009802 1.3e-06 57.0 152 37.5
Sed0012187 Sechium edule HOM05D008563 ORTHO05D009802 1.3e-06 57.0 82 46.3
unitig_21.g20864 Utricularia gibba HOM05D011353 ORTHO05D009956 1.3e-06 57.0 125 37.6
AL7G51640 Arabidopsis lyrata HOM05D009227 ORTHO05D009956 1.7e-06 56.6 95 42.1
Eucgr.J01434 Eucalyptus grandis HOM05D008889 ORTHO05D009956 2.2e-06 56.2 119 40.3
Psat5g232520 Pisum sativum HOM05D008563 ORTHO05D009802 2.2e-06 56.2 70 48.6
Aa31LG9G16880 Aethionema arabicum HOM05D009227 ORTHO05D009956 2.9e-06 55.8 114 38.6
Duzib268G0584 Durio zibethinus HOM05D018013 ORTHO05D013371 3.8e-06 55.5 68 51.5
Gohir.D08G061900 Gossypium hirsutum HOM05D009227 ORTHO05D009956 4.9e-06 55.1 135 38.5
Manes.14G093100 Manihot esculenta HOM05D018804 ORTHO05D014734 6.4e-06 54.7 82 45.1
THA.LOC104805540 Tarenaya hassleriana HOM05D009227 ORTHO05D009956 6.4e-06 54.7 139 37.4
Thecc.03G112200 Theobroma cacao HOM05D008563 ORTHO05D009802 6.4e-06 54.7 138 39.1
AT5G38790 Arabidopsis thaliana HOM05D009227 ORTHO05D009956 8.4e-06 54.3 97 40.2


User provided reference genes

Program Settings