Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_23515_v3 Cicer arietinum L. HOM05D000026 ORTHO05D008596 7.4e-115 417.2 201 100.0
Medtr8g027365 Medicago truncatula HOM05D000026 ORTHO05D008596 4.2e-102 374.8 195 91.3
TPR.G20231 Trifolium pratense HOM05D000026 ORTHO05D008596 9.7e-99 363.6 199 88.9
Lj3g0003520 Lotus japonicus HOM05D000026 ORTHO05D008596 6.9e-97 357.5 195 86.7
Glyma.16G023100 Glycine max HOM05D000026 ORTHO05D008596 2.6e-96 355.5 195 87.7
Phvul.010G115400 Phaseolus vulgaris HOM05D000026 ORTHO05D008596 1.4e-94 349.7 195 84.1
VMungo0331G1134 Vigna mungo HOM05D000026 ORTHO05D008596 9.4e-94 347.1 195 84.6
arahy.Tifrunner.gnm1.ann1.HRQ3AE Arachis hypogaea HOM05D000026 ORTHO05D008596 7.4e-91 337.4 195 82.6
arahy.Tifrunner.gnm1.ann1.CN1679 Arachis hypogaea HOM05D000026 ORTHO05D008596 3.1e-89 332.0 195 81.5
Lalb_Chr10g0100681 Lupinus albus HOM05D000026 ORTHO05D008596 3.1e-89 332.0 195 80.5
Lj7A496T103 Lonicera japonica HOM05D000026 ORTHO05D008596 5.5e-78 294.7 195 71.8
Thecc.01G339500 Theobroma cacao HOM05D000026 ORTHO05D008596 5.5e-78 294.7 197 68.5
Atru.chr5.703 Acer truncatum HOM05D000026 ORTHO05D008596 1.2e-77 293.5 197 70.1
Prupe.2G192000 Prunus persica HOM05D000026 ORTHO05D008596 2.1e-77 292.7 190 72.1
RcHm_v2.0_Chr1g0360221 Rosa chinensis HOM05D000026 ORTHO05D008596 3.6e-77 292.0 190 73.7
FvH4_7g16970 Fragaria vesca HOM05D000026 ORTHO05D008596 4.7e-77 291.6 190 73.2
FAN06G4713 Fragaria x ananassa HOM05D000026 ORTHO05D008596 4.7e-77 291.6 190 73.2
PGR031G0964 Punica granatum HOM05D000026 ORTHO05D008596 4.7e-77 291.6 190 71.1
FAN10G3002 Fragaria x ananassa HOM05D000026 ORTHO05D008596 6.1e-77 291.2 190 72.6
GSVIVG01027181001 Vitis vinifera HOM05D000026 ORTHO05D008596 8.0e-77 290.8 192 70.8
vmacro12664 Vaccinium macrocarpon HOM05D000026 ORTHO05D008596 1.0e-76 290.4 196 69.9
Cc02_g39620 Coffea canephora HOM05D000026 ORTHO05D008596 1.8e-76 289.7 198 70.2
Gohir.A07G136500 Gossypium hirsutum HOM05D000026 ORTHO05D008596 1.8e-76 289.7 198 69.7
FAN06G2200 Fragaria x ananassa HOM05D000026 ORTHO05D008596 2.3e-76 289.3 197 70.1
Cfa003780 Carpinus fangiana HOM05D000026 ORTHO05D008596 4.0e-76 288.5 197 70.6
DCAR_006978 Daucus carota HOM05D000026 ORTHO05D008596 4.0e-76 288.5 198 68.2
EL10Ac1g00239 Beta vulgaris HOM05D000026 ORTHO05D008596 6.7e-76 287.7 190 68.4
Gohir.D07G141900 Gossypium hirsutum HOM05D000026 ORTHO05D008596 6.7e-76 287.7 198 69.2
Gorai.001G153500 Gossypium raimondii HOM05D000026 ORTHO05D008596 6.7e-76 287.7 198 69.2
Potri.014G100700 Populus trichocarpa HOM05D000026 ORTHO05D008596 6.7e-76 287.7 196 69.9
Hund27184 Selenicereus undatus HOM05D000026 ORTHO05D008596 6.7e-76 287.7 190 69.5
CANSAT56G3067 Cannabis sativa HOM05D000026 ORTHO05D008596 3.3e-75 285.4 197 67.5
Cpa.g.sc96.56 Carica papaya HOM05D000026 ORTHO05D008596 3.3e-75 285.4 192 68.2
Hma1.2p1_0101F.1_g049143 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 3.3e-75 285.4 190 72.1
Hma1.2p1_2584F.1_g324880 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 3.3e-75 285.4 190 72.1
CSS0047897 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D008596 7.5e-75 284.3 197 67.0
Potri.002G173800 Populus trichocarpa HOM05D000026 ORTHO05D008596 9.7e-75 283.9 190 68.9
MD01G1084300 Malus domestica HOM05D000026 ORTHO05D008596 1.3e-74 283.5 190 68.9
MBI04_g28825_MAGBIO Magnolia biondii HOM05D000026 ORTHO05D008596 6.3e-74 281.2 190 66.8
Manes.05G020900 Manihot esculenta HOM05D000026 ORTHO05D008596 6.3e-74 281.2 190 70.5
FAN01G2684 Fragaria x ananassa HOM05D000026 ORTHO05D008596 1.4e-73 280.0 208 66.8
TWI23G0686 Tripterygium wilfordii HOM05D000026 ORTHO05D008596 1.4e-73 280.0 191 68.1
Aqoxy5G04296 Aquilegia oxysepala HOM05D000026 ORTHO05D008596 1.8e-73 279.6 191 69.1
AL4G46010 Arabidopsis lyrata HOM05D000026 ORTHO05D008596 3.1e-73 278.9 197 64.0
QL08p045855 Quercus lobata HOM05D000026 ORTHO05D008596 3.1e-73 278.9 190 69.5
Lsat_1_v5_gn_4_30860 Lactuca sativa HOM05D000026 ORTHO05D008596 4.1e-73 278.5 199 65.8
Eucgr.D02387 Eucalyptus grandis HOM05D000026 ORTHO05D008596 7.0e-73 277.7 190 68.4
HanXRQChr16g0524761 Helianthus annuus HOM05D000026 ORTHO05D008596 1.6e-72 276.6 198 66.7
TWI59G0194 Tripterygium wilfordii HOM05D000026 ORTHO05D008596 1.6e-72 276.6 193 65.3
Ciclev10022329m.g Citrus clementina HOM05D000026 ORTHO05D008596 2.0e-72 276.2 184 72.3
AT2G46580 Arabidopsis thaliana HOM05D000026 ORTHO05D008596 5.9e-72 274.6 197 61.9
SGA_v2.0_scaffold232G43545 Striga asiatica HOM05D000026 ORTHO05D008596 5.9e-72 274.6 198 65.7
Carub.0004s2930 Capsella rubella HOM05D000026 ORTHO05D008596 1.3e-71 273.5 197 62.9
CARHR141930 Cardamine hirsuta HOM05D000026 ORTHO05D008596 2.2e-71 272.7 197 62.9
Thhalv10001639m.g Eutrema salsugineum HOM05D000026 ORTHO05D008596 2.9e-71 272.3 197 62.4
TAR629G1880 Trochodendron aralioides HOM05D000026 ORTHO05D008596 2.9e-71 272.3 197 62.9
A04p34480 Brassica napus HOM05D000026 ORTHO05D008596 6.5e-71 271.2 197 60.9
BraA04t18906Z Brassica rapa HOM05D000026 ORTHO05D008596 6.5e-71 271.2 197 60.9
MSTRG.28272 Avicennia marina HOM05D000026 ORTHO05D008596 8.5e-71 270.8 199 65.8
PSO063G7217 Papaver somniferum HOM05D000026 ORTHO05D008596 7.2e-70 267.7 190 64.7
C04p72250 Brassica napus HOM05D000026 ORTHO05D008596 1.6e-69 266.5 197 60.9
BcaC02g07019 Brassica carinata HOM05D000026 ORTHO05D008596 2.7e-69 265.8 197 60.9
Nitab4.5_0000258g0260 Nicotiana tabacum HOM05D000026 ORTHO05D008596 2.7e-69 265.8 190 66.8
BcaC02g07042 Brassica carinata HOM05D000026 ORTHO05D008596 8.0e-69 264.2 196 61.7
Duzib133G0719 Durio zibethinus HOM05D000026 ORTHO05D008596 1.0e-68 263.8 166 73.5
unitig_21.g20560 Utricularia gibba HOM05D000026 ORTHO05D008596 1.8e-68 263.1 201 63.2
ECA234G0680 Erigeron canadensis HOM05D000026 ORTHO05D008596 2.3e-68 262.7 199 62.3
THA.LOC104827623 Tarenaya hassleriana HOM05D000026 ORTHO05D008596 2.3e-68 262.7 191 62.3
COL.COLO4_06235 Corchorus olitorius HOM05D000026 ORTHO05D008596 3.0e-68 262.3 166 72.3
Migut.N01531 Erythranthe guttata HOM05D000026 ORTHO05D008596 4.0e-68 261.9 194 65.5
Solyc05g050530.3 Solanum lycopersicum HOM05D000026 ORTHO05D008596 8.8e-68 260.8 184 67.9
Sopen05g028950 Solanum pennellii HOM05D000026 ORTHO05D008596 1.2e-67 260.4 180 69.4
CAN.G360.5 Capsicum annuum HOM05D000026 ORTHO05D008596 9.8e-67 257.3 186 66.1
Sp4g28630 Schrenkiella parvula HOM05D000026 ORTHO05D008596 9.8e-67 257.3 195 59.5
AUR62004514 Chenopodium quinoa HOM05D000026 ORTHO05D008596 4.8e-66 255.0 167 69.5
FAN10G2309 Fragaria x ananassa HOM05D000026 ORTHO05D000127 6.3e-66 254.6 167 72.5
Sed0016971 Sechium edule HOM05D000026 ORTHO05D008596 7.0e-65 251.1 190 61.1
Os03g0115500 Oryza sativa ssp. japonica HOM05D000026 ORTHO05D008596 2.7e-64 249.2 193 58.0
CsaV3_3G007930 Cucumis sativus L. HOM05D000026 ORTHO05D008596 3.5e-64 248.8 199 58.3
Zm00001eb001050 Zea mays HOM05D000026 ORTHO05D008596 5.9e-64 248.1 193 58.5
MELO3C006011.2 Cucumis melo HOM05D000026 ORTHO05D008596 1.1e-62 243.8 197 58.4
CiPaw.01G078200 Carya illinoinensis HOM05D000026 ORTHO05D008596 9.5e-62 240.7 167 67.7
Aa31LG1G27980 Aethionema arabicum HOM05D000026 ORTHO05D008596 3.6e-61 238.8 173 61.8
PGSC0003DMG400007008 Solanum tuberosum HOM05D000026 ORTHO05D008596 8.0e-61 237.7 162 69.8
SEGI_21315 Sequoiadendron giganteum HOM05D000026 ORTHO05D008596 5.2e-60 235.0 196 55.1
Dinv32607 Davidia involucrata HOM05D000026 ORTHO05D008596 2.2e-58 229.6 154 68.8
BcaNung06661 Brassica carinata HOM05D000026 ORTHO05D008596 8.3e-58 227.6 198 55.1
PSO170G4931 Papaver somniferum HOM05D000026 ORTHO05D008596 1.1e-57 227.3 190 57.9
CDE02G1978 Ceratophyllum demersum HOM05D000026 ORTHO05D008596 1.4e-57 226.9 193 56.0
Nitab4.5_0003865g0100 Nicotiana tabacum HOM05D000026 ORTHO05D008596 4.1e-57 225.3 190 59.5
FAN03G0355 Fragaria x ananassa HOM05D000026 ORTHO05D008596 7.0e-57 224.6 166 66.3
Actinidia28110 Actinidia chinensis HOM05D000026 ORTHO05D008596 7.8e-56 221.1 166 65.1
Rhsim01G0174600 Rhododendron simsii HOM05D000026 ORTHO05D008596 3.8e-55 218.8 195 56.4
BolC4t28712H Brassica oleracea HOM05D000026 ORTHO05D008596 1.9e-54 216.5 219 49.3
AagrBONN_evm.TU.Sc2ySwM_362.516 Anthoceros agrestis HOM05D005157 ORTHO05D006652 8.0e-53 211.1 197 51.8
Nn1g00327 Nelumbo nucifera HOM05D000026 ORTHO05D008596 1.2e-51 207.2 195 52.3
Mapoly0085s0082 Marchantia polymorpha HOM05D000026 ORTHO05D008596 9.8e-51 204.1 194 50.5
SMO119G0236 Selaginella moellendorffii HOM05D000026 ORTHO05D008596 2.2e-50 203.0 197 49.7
Hma1.2p1_0101F.1_g049146 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 6.0e-48 194.9 132 69.7
Hma1.2p1_2584F.1_g324890 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 6.0e-48 194.9 132 69.7
Pp3c7_90 Physcomitrium patens HOM05D000026 ORTHO05D008596 7.8e-48 194.5 195 43.1
Oeu004961.1 Olea europaea HOM05D000026 ORTHO05D008596 3.3e-46 189.1 132 63.6
Peaxi162Scf00716g00425 Petunia axillaris HOM05D000026 ORTHO05D008596 4.4e-43 178.7 194 46.9
Sabra14G0074100 Salix brachista HOM05D000026 ORTHO05D008596 6.4e-42 174.9 171 52.0
Sc01g0002470 Simmondsia chinensis HOM05D000026 ORTHO05D008596 5.1e-39 165.2 102 72.5
Hma1.2p1_0101F.1_g049160 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 4.4e-35 152.1 92 76.1
CBR_g3312 Chara braunii HOM05D000026 ORTHO05D008596 2.1e-32 143.3 214 38.3
ClCG05G000710 Citrullus lanatus HOM05D000026 ORTHO05D008596 1.2e-29 134.0 269 35.7
Actinidia28403 Actinidia chinensis HOM05D000026 ORTHO05D008596 8.1e-29 131.3 108 58.3
AUR62022739 Chenopodium quinoa HOM05D000026 ORTHO05D008596 2.0e-27 126.7 90 62.2
HPP92_015098 Vanilla planifolia HOM05D000026 ORTHO05D008596 6.4e-26 121.7 109 52.3
MCO05G651 Micromonas commoda HOM05D000026 ORTHO05D008596 3.5e-24 115.9 160 33.8
Sabra02G0139600 Salix brachista HOM05D000026 ORTHO05D008596 2.5e-22 109.8 70 71.4
ATR0757G161 Amborella trichopoda HOM05D000026 ORTHO05D008596 8.1e-21 104.8 77 64.9
PRCOL_00000497 Prasinoderma coloniale HOM05D000026 ORTHO05D008596 1.5e-19 100.5 230 32.6
Cre02.g095100 Chlamydomonas reinhardtii HOM05D000026 ORTHO05D008596 9.3e-17 91.3 142 32.4
Hund19453 Selenicereus undatus HOM05D004066 ORTHO05D008596 1.8e-12 77.0 52 63.5
Zm00001eb244850 Zea mays HOM05D017471 ORTHO05D012887 4.0e-12 75.9 58 55.2
Haze_15680 Corylus avellana HOM05D000026 ORTHO05D008596 1.7e-10 70.5 47 70.2
Zm00001eb123990 Zea mays HOM05D000026 ORTHO05D012887 4.9e-10 68.9 57 50.9
TAR636G3419 Trochodendron aralioides HOM05D000026 ORTHO05D008596 6.4e-10 68.6 62 51.6


User provided reference genes

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