Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_23461_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 0.0e+00 1221.1 637 100.0
Ca_23474_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 0.0e+00 1221.1 637 100.0
Psat0s2980g0160 Pisum sativum HOM05D006867 ORTHO05D008676 1.3e-303 1045.8 640 86.9
Medtr8g023750 Medicago truncatula HOM05D006867 ORTHO05D008676 6.2e-301 1036.9 640 86.1
TPR.G32787 Trifolium pratense HOM05D006867 ORTHO05D008676 2.3e-295 1018.5 637 84.8
Lj3g0022605 Lotus japonicus HOM05D006867 ORTHO05D008676 9.0e-284 979.9 643 82.0
Glyma.16G015800 Glycine max HOM05D006867 ORTHO05D008676 2.4e-276 955.3 645 79.7
Glyma.07G047300 Glycine max HOM05D006867 ORTHO05D008676 3.8e-274 948.0 645 78.4
Phvul.010G121700 Phaseolus vulgaris HOM05D006867 ORTHO05D008676 1.1e-270 936.4 650 78.2
VMungo0331G1883 Vigna mungo HOM05D006867 ORTHO05D008676 4.5e-267 924.5 646 77.6
Lalb_Chr10g0101011 Lupinus albus HOM05D006867 ORTHO05D008676 1.5e-254 882.9 644 74.8
Lalb_Chr17g0343131 Lupinus albus HOM05D006867 ORTHO05D008676 3.2e-249 865.1 650 71.8
arahy.Tifrunner.gnm1.ann1.Y7T28V Arachis hypogaea HOM05D006867 ORTHO05D008676 3.6e-248 861.7 672 72.0
arahy.Tifrunner.gnm1.ann1.L7530T Arachis hypogaea HOM05D006867 ORTHO05D008676 4.7e-248 861.3 672 71.9
CiPaw.02G046400 Carya illinoinensis HOM05D006867 ORTHO05D008676 1.4e-215 753.4 594 66.2
QL08p048171 Quercus lobata HOM05D006867 ORTHO05D008676 4.1e-212 741.9 602 67.1
GSVIVG01027485001 Vitis vinifera HOM05D006867 ORTHO05D008676 9.2e-212 740.7 586 66.7
Ciclev10019260m.g Citrus clementina HOM05D006867 ORTHO05D008676 2.8e-208 729.2 647 61.5
Thecc.01G329400 Theobroma cacao HOM05D006867 ORTHO05D008676 8.1e-208 727.6 644 61.5
Dinv32661 Davidia involucrata HOM05D006867 ORTHO05D008676 4.4e-206 721.8 607 62.9
COL.COLO4_23081 Corchorus olitorius HOM05D006867 ORTHO05D008676 1.7e-205 719.9 644 61.6
Manes.01G237400 Manihot esculenta HOM05D006867 ORTHO05D008676 1.2e-203 713.8 638 62.7
Atru.chr5.813 Acer truncatum HOM05D006867 ORTHO05D008676 3.9e-202 708.8 600 63.7
Potri.014G109500 Populus trichocarpa HOM05D006867 ORTHO05D008676 9.6e-201 704.1 635 62.8
Haze_15774 Corylus avellana HOM05D006867 ORTHO05D008676 1.3e-200 703.7 634 62.1
Potri.002G183500 Populus trichocarpa HOM05D006867 ORTHO05D008676 3.6e-200 702.2 636 62.4
Gohir.A12G118400 Gossypium hirsutum HOM05D006867 ORTHO05D008676 4.0e-199 698.7 632 60.8
Cfa003709 Carpinus fangiana HOM05D006867 ORTHO05D008676 3.4e-198 695.7 636 62.9
Gorai.008G133000 Gossypium raimondii HOM05D006867 ORTHO05D008676 1.7e-197 693.3 631 59.9
Gohir.D12G122200 Gossypium hirsutum HOM05D006867 ORTHO05D008676 4.9e-197 691.8 631 59.4
Sabra14G0080800 Salix brachista HOM05D006867 ORTHO05D008676 1.4e-196 690.3 622 63.0
Sabra02G0132100 Salix brachista HOM05D006867 ORTHO05D008676 1.3e-194 683.7 630 61.9
TAR629G2918 Trochodendron aralioides HOM05D006867 ORTHO05D008676 2.1e-192 676.4 640 58.4
Actinidia08011 Actinidia chinensis HOM05D006867 ORTHO05D008676 1.1e-191 674.1 638 57.7
Cc00_g15760 Coffea canephora HOM05D006867 ORTHO05D008676 4.0e-191 672.2 645 57.5
Prupe.2G203900 Prunus persica HOM05D006867 ORTHO05D008676 4.0e-191 672.2 639 60.3
CANSAT56G0208 Cannabis sativa HOM05D006867 ORTHO05D008676 5.3e-191 671.8 637 60.4
MBI11_g13783_MAGBIO Magnolia biondii HOM05D006867 ORTHO05D008676 5.3e-191 671.8 638 57.8
Sed0008932 Sechium edule HOM05D006867 ORTHO05D008676 1.2e-190 670.6 637 58.7
CANSAT56G2490 Cannabis sativa HOM05D006867 ORTHO05D008676 7.6e-190 667.9 637 60.3
Lj9A610G56 Lonicera japonica HOM05D006867 ORTHO05D008676 2.1e-187 659.8 647 59.0
Migut.I01214 Erythranthe guttata HOM05D006867 ORTHO05D008676 6.0e-187 658.3 659 56.0
vmacro08516 Vaccinium macrocarpon HOM05D006867 ORTHO05D008676 6.0e-187 658.3 682 55.4
Aa31LG1G28260 Aethionema arabicum HOM05D006867 ORTHO05D008676 1.8e-186 656.8 643 56.6
THA.LOC104817409 Tarenaya hassleriana HOM05D006867 ORTHO05D008676 1.1e-185 654.1 647 54.1
CsaV3_3G007140 Cucumis sativus L. HOM05D006867 ORTHO05D008676 3.3e-185 652.5 639 55.7
MD07G1165200 Malus domestica HOM05D006867 ORTHO05D008676 7.4e-185 651.4 656 55.9
Oeu032684.1 Olea europaea HOM05D006867 ORTHO05D008676 1.1e-183 647.5 654 55.4
Eucgr.L00743 Eucalyptus grandis HOM05D006867 ORTHO05D008676 1.5e-182 643.7 645 57.4
EL10Ac9g22256 Beta vulgaris HOM05D006867 ORTHO05D008676 2.0e-182 643.3 643 55.8
CAN.G90.6 Capsicum annuum HOM05D006867 ORTHO05D008676 2.6e-182 642.9 645 56.3
ClCG05G000080 Citrullus lanatus HOM05D006867 ORTHO05D008676 7.6e-182 641.3 519 61.7
RcHm_v2.0_Chr1g0361851 Rosa chinensis HOM05D006867 ORTHO05D008676 4.9e-181 638.6 603 57.4
MD01G1098500 Malus domestica HOM05D006867 ORTHO05D008676 8.4e-181 637.9 640 55.9
Nitab4.5_0004754g0040 Nicotiana tabacum HOM05D006867 ORTHO05D008676 2.5e-180 636.3 632 54.7
FAN06G0390 Fragaria x ananassa HOM05D006867 ORTHO05D008676 7.1e-180 634.8 643 56.8
Nitab4.5_0000348g0180 Nicotiana tabacum HOM05D006867 ORTHO05D008676 7.1e-180 634.8 644 56.5
Aqoxy5G04385 Aquilegia oxysepala HOM05D006867 ORTHO05D008676 9.3e-180 634.4 646 57.3
ATR0824G236 Amborella trichopoda HOM05D006867 ORTHO05D008676 1.2e-179 634.0 646 54.3
FAN01G1143 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.2e-179 634.0 486 64.8
FAN03G0961 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.2e-179 634.0 486 64.8
FAN06G3784 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.2e-179 634.0 602 58.0
FvH4_7g18270 Fragaria vesca HOM05D006867 ORTHO05D008676 2.7e-179 632.9 602 57.8
HanXRQChr15g0480381 Helianthus annuus HOM05D006867 ORTHO05D008676 7.9e-179 631.3 525 61.5
Sp4g28920 Schrenkiella parvula HOM05D006867 ORTHO05D008676 2.3e-178 629.8 645 53.8
AL4G46360 Arabidopsis lyrata HOM05D006867 ORTHO05D008676 3.9e-178 629.0 645 55.8
FAN10G4369 Fragaria x ananassa HOM05D006867 ORTHO05D008676 3.9e-178 629.0 599 57.3
Thhalv10001357m.g Eutrema salsugineum HOM05D006867 ORTHO05D008676 5.1e-178 628.6 647 54.4
CARHR142250 Cardamine hirsuta HOM05D006867 ORTHO05D008676 9.6e-177 624.4 647 56.0
TWI59G0124 Tripterygium wilfordii HOM05D006867 ORTHO05D008676 9.6e-177 624.4 642 56.5
Sopen08g006420 Solanum pennellii HOM05D006867 ORTHO05D008676 1.6e-176 623.6 517 61.3
Lsat_1_v5_gn_3_39660 Lactuca sativa HOM05D006867 ORTHO05D008676 6.2e-176 621.7 657 54.6
FAN10G3600 Fragaria x ananassa HOM05D006867 ORTHO05D008676 8.2e-176 621.3 600 57.2
Carub.0004s2962 Capsella rubella HOM05D006867 ORTHO05D008676 1.8e-175 620.2 643 53.7
HanXRQChr17g0542101 Helianthus annuus HOM05D006867 ORTHO05D008676 1.8e-175 620.2 634 54.9
AT2G46900 Arabidopsis thaliana HOM05D006867 ORTHO05D008676 4.0e-175 619.0 643 54.6
SalBow6G1414 Salvia bowleyana HOM05D006867 ORTHO05D008676 2.0e-174 616.7 648 54.3
Rhsim04G0175800 Rhododendron simsii HOM05D006867 ORTHO05D008676 1.7e-173 613.6 617 55.4
Ah.01g010880 Amaranthus hybridus HOM05D006867 ORTHO05D008676 2.2e-173 613.2 643 53.0
Sc08g0001320 Simmondsia chinensis HOM05D006867 ORTHO05D008676 3.8e-173 612.5 629 53.7
Hund00158 Selenicereus undatus HOM05D006867 ORTHO05D008676 5.0e-173 612.1 646 55.3
Os09g0514900 Oryza sativa ssp. japonica HOM05D006867 ORTHO05D008676 8.4e-173 611.3 597 55.4
AUR62010330 Chenopodium quinoa HOM05D006867 ORTHO05D008676 5.5e-172 608.6 640 54.4
AUR62039056 Chenopodium quinoa HOM05D006867 ORTHO05D008676 6.1e-171 605.1 639 54.0
Zm00001eb102740 Zea mays HOM05D006867 ORTHO05D008676 1.8e-170 603.6 639 52.3
PSO782G1247 Papaver somniferum HOM05D006867 ORTHO05D008676 2.3e-170 603.2 665 53.2
MSTRG.10869 Avicennia marina HOM05D006867 ORTHO05D008676 1.1e-169 600.9 650 51.8
SGA_v2.0_scaffold122G33256 Striga asiatica HOM05D006867 ORTHO05D008676 5.7e-169 598.6 612 53.6
Hma1.2p1_0074F.1_g039020 Hydrangea macrophylla HOM05D006867 ORTHO05D008676 1.6e-168 597.0 434 68.4
HPP92_013529 Vanilla planifolia HOM05D006867 ORTHO05D008676 1.5e-166 590.5 636 51.1
FAN01G0521 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.3e-165 587.4 462 62.1
A05p00940 Brassica napus HOM05D006867 ORTHO05D008676 1.7e-165 587.0 644 51.4
BolC4t21761H Brassica oleracea HOM05D006867 ORTHO05D008676 8.5e-165 584.7 644 52.6
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 5.5e-164 582.0 631 52.9
ECA246G2438 Erigeron canadensis HOM05D006867 ORTHO05D008676 6.9e-159 565.1 532 55.6
CSS0030251 Camellia sinensis var. sinensis HOM05D006867 ORTHO05D008676 1.0e-154 551.2 549 57.6
Peaxi162Scf01205g00180 Petunia axillaris HOM05D006867 ORTHO05D008676 3.6e-147 526.2 391 65.2
DCAR_022120 Daucus carota HOM05D006867 ORTHO05D008676 6.7e-146 521.9 628 48.7
Cpa.g.sc1043.2 Carica papaya HOM05D006867 ORTHO05D008676 4.7e-139 499.2 348 67.2
BcaC02g12633 Brassica carinata HOM05D006867 ORTHO05D008676 2.0e-134 483.8 642 47.8
MELO3C005936.2 Cucumis melo HOM05D006867 ORTHO05D008676 4.1e-127 459.5 352 62.5
Pp3c1_12740 Physcomitrium patens HOM05D006867 ORTHO05D008676 4.6e-118 429.5 528 44.5
CDE09G1372 Ceratophyllum demersum HOM05D006867 ORTHO05D008676 1.0e-117 428.3 489 48.7
Pp3c11_2510 Physcomitrium patens HOM05D006867 ORTHO05D008676 9.8e-113 411.8 619 42.8
AagrBONN_evm.TU.Sc2ySwM_344.4360 Anthoceros agrestis HOM05D006867 ORTHO05D008676 2.4e-111 407.1 550 42.4
SMO331G0055 Selaginella moellendorffii HOM05D006867 ORTHO05D008676 1.9e-108 397.5 474 45.8
Mapoly0002s0219 Marchantia polymorpha HOM05D006867 ORTHO05D008676 1.6e-107 394.4 491 44.4
Cre11.g467639 Chlamydomonas reinhardtii HOM05D006867 ORTHO05D008676 9.0e-82 308.9 523 34.8
CBR_g36359 Chara braunii HOM05D006867 ORTHO05D008676 6.9e-74 282.7 667 29.4
PRCOL_00004033 Prasinoderma coloniale HOM05D006867 ORTHO05D008676 1.4e-58 231.9 469 31.3
MCO10G037 Micromonas commoda HOM05D006867 ORTHO05D008676 9.0e-50 202.6 490 28.4
Solyc08g016090.4 Solanum lycopersicum HOM05D006867 ORTHO05D008676 1.2e-38 165.6 414 30.4
C04p72500 Brassica napus HOM05D006867 ORTHO05D008676 5.7e-28 130.2 98 59.2
BolC4t28738H Brassica oleracea HOM05D006867 ORTHO05D008676 5.7e-28 130.2 98 59.2
A04p34720 Brassica napus HOM05D006867 ORTHO05D008676 3.1e-26 124.4 98 57.1
Cfa022788 Carpinus fangiana HOM05D006867 ORTHO05D008676 1.3e-16 92.4 437 24.0


User provided reference genes

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