Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_23385_v3 Cicer arietinum L. HOM05D000011 ORTHO05D000018 4.8e-126 454.5 233 100.0
Lj3g0024620 Lotus japonicus HOM05D000011 ORTHO05D002639 3.6e-20 102.8 152 45.4
Medtr8g020790 Medicago truncatula HOM05D000011 ORTHO05D002639 8.8e-19 98.2 64 71.9
Medtr1g022070 Medicago truncatula HOM05D000011 ORTHO05D002639 5.3e-16 89.0 125 49.6
TPR.G36614 Trifolium pratense HOM05D000011 ORTHO05D000018 3.8e-14 82.8 63 68.3
TPR.G40232 Trifolium pratense HOM05D000011 ORTHO05D002639 1.2e-12 77.8 56 69.6
TPR.G40239 Trifolium pratense HOM05D000432 ORTHO05D002639 2.1e-12 77.0 128 40.6
TPR.G29752 Trifolium pratense HOM05D000525 ORTHO05D001368 2.7e-12 76.6 128 42.2
Prupe.5G025000 Prunus persica HOM05D000011 ORTHO05D000157 2.8e-09 66.6 110 33.6
arahy.Tifrunner.gnm1.ann1.AUU7HE Arachis hypogaea HOM05D000011 ORTHO05D002639 1.8e-08 63.9 64 53.1
arahy.Tifrunner.gnm1.ann1.UFV38F Arachis hypogaea HOM05D000011 ORTHO05D002639 9.1e-08 61.6 64 51.6
MD17G1025700 Malus domestica HOM05D000011 ORTHO05D002639 3.5e-07 59.7 88 40.9
QL05p004917 Quercus lobata HOM05D000011 ORTHO05D002639 3.5e-07 59.7 100 37.0
RcHm_v2.0_Chr2g0145591 Rosa chinensis HOM05D000011 ORTHO05D002639 4.5e-07 59.3 112 37.5
Dinv10771 Davidia involucrata HOM05D000009 ORTHO05D000008 7.7e-07 58.5 110 34.5
RcHm_v2.0_Chr2g0145611 Rosa chinensis HOM05D000011 ORTHO05D002639 7.7e-07 58.5 67 47.8
Nitab4.5_0002085g0050 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.3e-06 57.8 165 28.5
Haze_05235 Corylus avellana HOM05D000011 ORTHO05D000157 2.2e-06 57.0 68 44.1
Migut.D01766 Erythranthe guttata HOM05D000011 ORTHO05D000018 2.2e-06 57.0 137 30.7
Prupe.1G163600 Prunus persica HOM05D000009 ORTHO05D000008 2.2e-06 57.0 65 49.2
Prupe.3G040600 Prunus persica HOM05D000011 ORTHO05D002639 2.2e-06 57.0 84 35.7
Actinidia23616 Actinidia chinensis HOM05D000011 ORTHO05D000157 2.9e-06 56.6 111 33.3
CSS0010871 Camellia sinensis var. sinensis HOM05D000011 ORTHO05D000157 2.9e-06 56.6 93 34.4
Haze_05239 Corylus avellana HOM05D000011 ORTHO05D000157 2.9e-06 56.6 68 44.1
FvH4_6g48170 Fragaria vesca HOM05D000009 ORTHO05D000008 2.9e-06 56.6 69 47.8
MD06G1024500 Malus domestica HOM05D000011 ORTHO05D000157 2.9e-06 56.6 143 30.8
VMungo1127G1705 Vigna mungo HOM05D000011 ORTHO05D000018 2.9e-06 56.6 83 38.6
GSVIVG01008201001 Vitis vinifera HOM05D006004 ORTHO05D006976 2.9e-06 56.6 155 31.6
CiPaw.01G245700 Carya illinoinensis HOM05D000009 ORTHO05D010531 3.8e-06 56.2 89 37.1
Haze_05234 Corylus avellana HOM05D000011 ORTHO05D000157 3.8e-06 56.2 112 34.8
Haze_05827 Corylus avellana HOM05D000011 ORTHO05D000157 3.8e-06 56.2 68 42.6
Haze_18595 Corylus avellana HOM05D000011 ORTHO05D000157 3.8e-06 56.2 68 42.6
GSVIVG01037475001 Vitis vinifera HOM05D000011 ORTHO05D000157 3.8e-06 56.2 73 38.4
GSVIVG01037477001 Vitis vinifera HOM05D000011 ORTHO05D000157 3.8e-06 56.2 73 38.4
arahy.Tifrunner.gnm1.ann1.S37TL9 Arachis hypogaea HOM05D000009 ORTHO05D000008 5.0e-06 55.8 120 33.3
Cc02_g36190 Coffea canephora HOM05D000009 ORTHO05D000008 5.0e-06 55.8 66 45.5
QL05p006877 Quercus lobata HOM05D000011 ORTHO05D002639 5.0e-06 55.8 68 38.2
RcHm_v2.0_Chr7g0212471 Rosa chinensis HOM05D000011 ORTHO05D000157 5.0e-06 55.8 143 31.5
CSS0050158 Camellia sinensis var. sinensis HOM05D000011 ORTHO05D000157 6.5e-06 55.5 93 33.3
Phvul.011G014200 Phaseolus vulgaris HOM05D000011 ORTHO05D000018 6.5e-06 55.5 83 36.1
Prupe.5G025600 Prunus persica HOM05D000011 ORTHO05D000157 6.5e-06 55.5 143 28.7
Prupe.8G037700 Prunus persica HOM05D000011 ORTHO05D002639 6.5e-06 55.5 61 45.9
QL05p005665 Quercus lobata HOM05D000011 ORTHO05D002639 6.5e-06 55.5 148 26.4
SalBow1G3418 Salvia bowleyana HOM05D000011 ORTHO05D000018 6.5e-06 55.5 76 36.8
SalBow1G1935 Salvia bowleyana HOM05D000011 ORTHO05D000018 8.5e-06 55.1 82 40.2


User provided reference genes

Program Settings