Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_23370_v3 Cicer arietinum L. HOM05D008167 ORTHO05D010296 5.2e-156 554.3 272 100.0
Psat4g183040 Pisum sativum HOM05D008167 ORTHO05D010296 2.4e-129 465.7 273 84.2
Lalb_Chr01g0013571 Lupinus albus HOM05D008167 ORTHO05D010296 4.1e-116 421.8 272 73.9
Medtr8g020400 Medicago truncatula HOM05D008167 ORTHO05D010296 2.5e-113 412.5 238 83.6
TPR.G32489 Trifolium pratense HOM05D008167 ORTHO05D010296 5.1e-111 404.8 272 73.5
arahy.Tifrunner.gnm1.ann1.R32LA5 Arachis hypogaea HOM05D008167 ORTHO05D010296 3.1e-108 395.6 272 69.9
Lj3g0012000 Lotus japonicus HOM05D008167 ORTHO05D010296 2.6e-107 392.5 239 79.5
arahy.Tifrunner.gnm1.ann1.DD9M5F Arachis hypogaea HOM05D008167 ORTHO05D010296 4.8e-101 371.7 335 57.3
VMungo0331G0414 Vigna mungo HOM05D008167 ORTHO05D010296 2.1e-96 356.3 273 66.3
QL12p036142 Quercus lobata HOM05D008167 ORTHO05D010296 3.2e-89 332.4 264 60.2
Actinidia10306 Actinidia chinensis HOM05D008167 ORTHO05D010296 3.1e-84 315.8 264 58.0
CiPaw.05G235800 Carya illinoinensis HOM05D008167 ORTHO05D010296 9.1e-84 314.3 269 56.1
Manes.02G154800 Manihot esculenta HOM05D008167 ORTHO05D010296 2.9e-82 309.3 263 56.7
COL.COLO4_16444 Corchorus olitorius HOM05D008167 ORTHO05D010296 3.8e-82 308.9 269 55.0
Thecc.08G110600 Theobroma cacao HOM05D008167 ORTHO05D010296 1.1e-81 307.4 272 55.5
Cfa015915 Carpinus fangiana HOM05D008167 ORTHO05D010296 4.2e-81 305.4 264 54.9
TAR628G0982 Trochodendron aralioides HOM05D008167 ORTHO05D010296 3.6e-80 302.4 263 55.9
Lj4C719T5 Lonicera japonica HOM05D008167 ORTHO05D010296 1.8e-79 300.1 269 53.9
Dinv13035 Davidia involucrata HOM05D008167 ORTHO05D010296 5.2e-79 298.5 263 55.5
Lj4C716T9 Lonicera japonica HOM05D008167 ORTHO05D010296 6.8e-79 298.1 269 54.6
FAN08G3120 Fragaria x ananassa HOM05D008167 ORTHO05D010296 2.0e-78 296.6 263 55.5
Nn1g05299 Nelumbo nucifera HOM05D008167 ORTHO05D010296 5.7e-78 295.0 263 55.1
FAN04G1438 Fragaria x ananassa HOM05D008167 ORTHO05D010296 7.5e-78 294.7 263 54.8
MD15G1365100 Malus domestica HOM05D008167 ORTHO05D010296 1.3e-77 293.9 263 54.0
Gorai.002G219300 Gossypium raimondii HOM05D008167 ORTHO05D010296 1.7e-77 293.5 267 55.8
FvH4_5g37850 Fragaria vesca HOM05D008167 ORTHO05D010296 2.2e-77 293.1 263 54.4
FAN18G0166 Fragaria x ananassa HOM05D008167 ORTHO05D010296 2.2e-77 293.1 263 54.4
Prupe.1G513100 Prunus persica HOM05D008167 ORTHO05D010296 1.4e-76 290.4 263 54.8
TWI56G0729 Tripterygium wilfordii HOM05D008167 ORTHO05D010296 1.4e-76 290.4 264 53.8
RcHm_v2.0_Chr7g0239831 Rosa chinensis HOM05D008167 ORTHO05D010296 1.8e-76 290.0 263 55.5
Atru.chr13.1254 Acer truncatum HOM05D008167 ORTHO05D010296 7.0e-76 288.1 263 54.8
FAN13G0369 Fragaria x ananassa HOM05D008167 ORTHO05D010296 9.1e-76 287.7 264 54.5
Aqoxy6G00583 Aquilegia oxysepala HOM05D008167 ORTHO05D010296 1.0e-74 284.3 271 54.6
Ciclev10001481m.g Citrus clementina HOM05D008167 ORTHO05D010296 5.0e-74 282.0 262 53.1
PSO133G0102 Papaver somniferum HOM05D008167 ORTHO05D010296 2.7e-72 276.2 263 53.2
PSO541G2703 Papaver somniferum HOM05D008167 ORTHO05D010296 2.7e-72 276.2 265 53.2
Cpa.g.sc66.82 Carica papaya HOM05D008167 ORTHO05D010296 4.7e-72 275.4 241 57.3
MBI02_g36661_MAGBIO Magnolia biondii HOM05D008167 ORTHO05D010296 1.2e-70 270.8 263 50.6
Duzib093G0044 Durio zibethinus HOM05D008167 ORTHO05D010296 2.0e-70 270.0 245 55.1
Potri.002G093800 Populus trichocarpa HOM05D008167 ORTHO05D010296 4.4e-70 268.9 263 51.3
Gohir.D01G176900 Gossypium hirsutum HOM05D008167 ORTHO05D010296 5.7e-70 268.5 242 56.2
HanXRQChr04g0111501 Helianthus annuus HOM05D008167 ORTHO05D010296 2.8e-69 266.2 270 50.4
Gohir.A01G186400 Gossypium hirsutum HOM05D008167 ORTHO05D010296 2.0e-67 260.0 252 52.8
Eucgr.F02444 Eucalyptus grandis HOM05D008167 ORTHO05D010296 2.7e-67 259.6 263 52.5
CANSAT25G1054 Cannabis sativa HOM05D008167 ORTHO05D010296 1.1e-65 254.2 240 52.5
Lsat_1_v5_gn_0_9700 Lactuca sativa HOM05D008167 ORTHO05D010296 1.2e-64 250.8 268 48.1
EL10Ac1g01257 Beta vulgaris HOM05D008167 ORTHO05D010296 1.8e-63 246.9 263 46.8
ECA232G3852 Erigeron canadensis HOM05D008167 ORTHO05D010296 2.3e-63 246.5 235 51.5
AUR62027724 Chenopodium quinoa HOM05D008167 ORTHO05D010296 4.4e-62 242.3 267 45.7
GSVIVG01009002001 Vitis vinifera HOM05D008167 ORTHO05D010296 2.9e-61 239.6 219 54.8
DCAR_008714 Daucus carota HOM05D008167 ORTHO05D010296 2.8e-56 223.0 244 46.3
Os06g0222800 Oryza sativa ssp. japonica HOM05D008167 ORTHO05D010296 1.3e-53 214.2 267 43.1
Sabra02G0073900 Salix brachista HOM05D008167 ORTHO05D010296 8.6e-50 201.4 257 42.0
vmacro21234 Vaccinium macrocarpon HOM05D008167 ORTHO05D010296 7.8e-43 178.3 140 59.3
Glyma.16G006900 Glycine max HOM05D008167 ORTHO05D010296 2.2e-37 160.2 209 46.9
SEGI_30626 Sequoiadendron giganteum HOM05D008167 ORTHO05D010296 4.7e-32 142.5 225 40.0
ATR0564G341 Amborella trichopoda HOM05D008167 ORTHO05D010296 3.8e-29 132.9 131 48.9
vmacro21235 Vaccinium macrocarpon HOM05D008167 ORTHO05D010296 4.9e-29 132.5 104 57.7
Glyma.07G037500 Glycine max HOM05D008167 ORTHO05D010296 1.1e-28 131.3 127 57.5
Haze_15967 Corylus avellana HOM05D008167 ORTHO05D010296 1.4e-28 131.0 129 49.6
Medtr8g020410 Medicago truncatula HOM05D008167 ORTHO05D010296 1.9e-28 130.6 193 43.5
Pp3c20_15640 Physcomitrium patens HOM05D008167 ORTHO05D010296 1.9e-28 130.6 270 33.7
Haze_17026 Corylus avellana HOM05D000028 ORTHO05D010296 2.4e-28 130.2 143 46.9
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 3.0e-26 123.2 82 65.9
Haze_00155 Corylus avellana HOM05D008167 ORTHO05D010296 3.9e-26 122.9 83 63.9
Haze_08650 Corylus avellana HOM05D008167 ORTHO05D010296 3.8e-13 79.7 53 58.5
Glyma.05G095633 Glycine max HOM05D008167 ORTHO05D010296 1.0e-10 71.6 54 64.8


User provided reference genes

Program Settings