Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_23323_v3 Cicer arietinum L. HOM05D000060 ORTHO05D000082 2.8e-126 455.3 231 100.0
TPR.G19284 Trifolium pratense HOM05D000060 ORTHO05D000082 2.1e-81 306.2 242 72.3
TPR.G37615 Trifolium pratense HOM05D000060 ORTHO05D000082 1.5e-79 300.1 247 70.4
Medtr8g017090 Medicago truncatula HOM05D000060 ORTHO05D000082 5.6e-74 281.6 247 67.6
Psat4g188520 Pisum sativum HOM05D000060 ORTHO05D000082 7.5e-71 271.2 246 65.4
Phvul.010G138500 Phaseolus vulgaris HOM05D000060 ORTHO05D000082 2.1e-52 209.9 234 53.4
Glyma.07G009500 Glycine max HOM05D000060 ORTHO05D000082 4.3e-50 202.2 248 51.6
VMungo0331G1433 Vigna mungo HOM05D000060 ORTHO05D000082 7.3e-50 201.4 240 52.1
Glyma.08G192600 Glycine max HOM05D000060 ORTHO05D000082 3.8e-46 189.1 251 49.4
Lj3g0008345 Lotus japonicus HOM05D000060 ORTHO05D000082 5.4e-45 185.3 244 52.0
Lalb_Chr25g0280731 Lupinus albus HOM05D000060 ORTHO05D000082 1.7e-43 180.3 252 48.0
Lalb_Chr21g0311611 Lupinus albus HOM05D000060 ORTHO05D000082 2.3e-43 179.9 252 48.0
arahy.Tifrunner.gnm1.ann1.J880J5 Arachis hypogaea HOM05D000060 ORTHO05D000082 1.2e-39 167.5 250 46.4
arahy.Tifrunner.gnm1.ann1.58N3H6 Arachis hypogaea HOM05D000060 ORTHO05D000082 5.8e-39 165.2 248 46.0
Lalb_Chr04g0263221 Lupinus albus HOM05D000060 ORTHO05D000082 6.0e-36 155.2 185 52.4
CiPaw.01G224500 Carya illinoinensis HOM05D000060 ORTHO05D000082 1.6e-25 120.6 245 39.6
CiPaw.02G139700 Carya illinoinensis HOM05D000060 ORTHO05D000082 3.1e-24 116.3 248 37.9
QL05p012437 Quercus lobata HOM05D000060 ORTHO05D000082 3.8e-22 109.4 237 37.6
RcHm_v2.0_Chr2g0143351 Rosa chinensis HOM05D000060 ORTHO05D000082 3.8e-22 109.4 254 41.3
FvH4_6g33490 Fragaria vesca HOM05D000060 ORTHO05D000082 1.0e-19 101.3 252 36.9
FAN09G3787 Fragaria x ananassa HOM05D000060 ORTHO05D000082 1.0e-19 101.3 250 36.8
FAN14G2199 Fragaria x ananassa HOM05D000060 ORTHO05D000082 1.0e-19 101.3 252 36.9
FAN02G2282 Fragaria x ananassa HOM05D000060 ORTHO05D000082 3.1e-16 89.7 183 37.2
Duzib160G0356 Durio zibethinus HOM05D000060 ORTHO05D000082 5.3e-16 89.0 180 39.4
ECA247G2077 Erigeron canadensis HOM05D000060 ORTHO05D000082 9.0e-16 88.2 268 31.3
Gohir.A10G058500 Gossypium hirsutum HOM05D000060 ORTHO05D000082 1.1e-13 81.3 174 35.6
Gohir.D10G060300 Gossypium hirsutum HOM05D000060 ORTHO05D000082 1.1e-13 81.3 174 36.2
Gorai.011G064500 Gossypium raimondii HOM05D000060 ORTHO05D000082 1.1e-13 81.3 174 36.2
HanXRQChr01g0016451 Helianthus annuus HOM05D000060 ORTHO05D000082 7.1e-13 78.6 237 33.3
Manes.11G026000 Manihot esculenta HOM05D000060 ORTHO05D000082 1.2e-12 77.8 173 39.3
Manes.04G140100 Manihot esculenta HOM05D000060 ORTHO05D000082 3.5e-12 76.3 176 37.5
Thecc.06G112600 Theobroma cacao HOM05D000060 ORTHO05D000082 4.6e-12 75.9 80 57.5
Duzib235G0961 Durio zibethinus HOM05D000060 ORTHO05D000082 6.0e-12 75.5 174 39.7
Cpa.g.sc25.41 Carica papaya HOM05D000060 ORTHO05D000082 7.9e-12 75.1 183 36.1
Thecc.06G112900 Theobroma cacao HOM05D000060 ORTHO05D000082 1.3e-11 74.3 149 40.3
Medtr2g100020 Medicago truncatula HOM05D000060 ORTHO05D000082 1.8e-11 73.9 167 35.9
Actinidia39110 Actinidia chinensis HOM05D000060 ORTHO05D000082 3.9e-11 72.8 162 40.7
Lsat_1_v5_gn_1_35561 Lactuca sativa HOM05D000060 ORTHO05D000082 3.9e-11 72.8 273 31.5
Sabra03G0024100 Salix brachista HOM05D000060 ORTHO05D000082 3.9e-11 72.8 152 34.9
Oeu011889.1 Olea europaea HOM05D000060 ORTHO05D000082 1.1e-10 71.2 170 36.5
CsaV3_7G034760 Cucumis sativus L. HOM05D000060 ORTHO05D000082 1.5e-10 70.9 232 32.3
MELO3C024387.2 Cucumis melo HOM05D000060 ORTHO05D000082 3.3e-10 69.7 232 34.1
Sc15g0000150 Simmondsia chinensis HOM05D000060 ORTHO05D000082 4.3e-10 69.3 118 35.6
Actinidia09032 Actinidia chinensis HOM05D000060 ORTHO05D000082 7.4e-10 68.6 163 39.9
ClCG09G000720 Citrullus lanatus HOM05D000060 ORTHO05D000082 7.4e-10 68.6 227 32.6
Potri.003G039700 Populus trichocarpa HOM05D000060 ORTHO05D000082 7.4e-10 68.6 166 31.3
TAR383G1027 Trochodendron aralioides HOM05D000060 ORTHO05D000082 7.4e-10 68.6 165 35.8
PGSC0003DMG400004880 Solanum tuberosum HOM05D000060 ORTHO05D000082 1.3e-09 67.8 104 41.3
TWI79G0043 Tripterygium wilfordii HOM05D000060 ORTHO05D000082 2.2e-09 67.0 175 34.9
CAN.G825.34 Capsicum annuum HOM05D000060 ORTHO05D000082 2.8e-09 66.6 156 36.5
MD09G1192800 Malus domestica HOM05D000060 ORTHO05D000082 3.7e-09 66.2 56 60.7
CSS0045036 Camellia sinensis var. sinensis HOM05D000060 ORTHO05D000082 4.8e-09 65.9 239 30.5
CANSAT56G0282 Cannabis sativa HOM05D000060 ORTHO05D000082 6.3e-09 65.5 243 30.9
AUR62009828 Chenopodium quinoa HOM05D000060 ORTHO05D000082 8.2e-09 65.1 45 71.1
Rhsim12G0206300 Rhododendron simsii HOM05D000060 ORTHO05D000082 8.2e-09 65.1 166 38.0
AUR62038140 Chenopodium quinoa HOM05D000060 ORTHO05D000082 1.4e-08 64.3 45 68.9
MD00G1059900 Malus domestica HOM05D000060 ORTHO05D000082 1.4e-08 64.3 103 43.7
MSTRG.10981 Avicennia marina HOM05D000060 ORTHO05D000082 2.4e-08 63.5 57 59.6
THA.LOC104814042 Tarenaya hassleriana HOM05D000060 ORTHO05D000082 3.1e-08 63.2 89 40.4
Dinv37910 Davidia involucrata HOM05D000060 ORTHO05D000082 4.1e-08 62.8 239 30.5
Actinidia32151 Actinidia chinensis HOM05D000060 ORTHO05D000082 5.3e-08 62.4 164 32.9
Nitab4.5_0008454g0010 Nicotiana tabacum HOM05D000060 ORTHO05D000082 6.9e-08 62.0 161 32.3
Peaxi162Scf00314g00028 Petunia axillaris HOM05D000060 ORTHO05D000082 6.9e-08 62.0 154 33.8
Nitab4.5_0000255g0200 Nicotiana tabacum HOM05D000060 ORTHO05D000082 9.0e-08 61.6 159 32.7
Potri.001G196400 Populus trichocarpa HOM05D000060 ORTHO05D000082 9.0e-08 61.6 132 34.1
PGR102G0359 Punica granatum HOM05D000060 ORTHO05D000082 9.0e-08 61.6 272 29.0
TWI31G0438 Tripterygium wilfordii HOM05D000060 ORTHO05D000082 9.0e-08 61.6 178 32.6
COL.COLO4_21066 Corchorus olitorius HOM05D000060 ORTHO05D000082 1.2e-07 61.2 42 66.7
Rhsim07G0142100 Rhododendron simsii HOM05D000060 ORTHO05D000082 2.6e-07 60.1 172 29.1
Thecc.09G054700 Theobroma cacao HOM05D000060 ORTHO05D000082 2.6e-07 60.1 59 55.9
TPR.G6598 Trifolium pratense HOM05D000060 ORTHO05D000082 2.6e-07 60.1 197 31.5
Prupe.3G049100 Prunus persica HOM05D000060 ORTHO05D000082 3.4e-07 59.7 201 30.8
BcaB04g20975 Brassica carinata HOM05D000060 ORTHO05D000082 5.9e-07 58.9 130 36.2
BcaC09g48376 Brassica carinata HOM05D000060 ORTHO05D000082 5.9e-07 58.9 132 37.9
A01p39760 Brassica napus HOM05D000060 ORTHO05D000082 5.9e-07 58.9 132 37.9
C01p50740 Brassica napus HOM05D000060 ORTHO05D000082 5.9e-07 58.9 132 37.9
BolC1t05023H Brassica oleracea HOM05D000060 ORTHO05D000082 5.9e-07 58.9 132 37.9
Sc10g0007810 Simmondsia chinensis HOM05D000060 ORTHO05D000082 5.9e-07 58.9 100 39.0
DCAR_007624 Daucus carota HOM05D000060 ORTHO05D000082 7.7e-07 58.5 172 32.6
Gohir.A06G190750 Gossypium hirsutum HOM05D000060 ORTHO05D000082 7.7e-07 58.5 68 50.0
Gohir.D06G199133 Gossypium hirsutum HOM05D000060 ORTHO05D000082 1.0e-06 58.2 68 48.5
Gorai.010G232100 Gossypium raimondii HOM05D000060 ORTHO05D000082 1.0e-06 58.2 68 48.5
Nn8g38847 Nelumbo nucifera HOM05D000060 ORTHO05D000082 1.0e-06 58.2 259 28.2
TAR626G0428 Trochodendron aralioides HOM05D000060 ORTHO05D000082 1.0e-06 58.2 171 36.3
Glyma.13G349700 Glycine max HOM05D000060 ORTHO05D000082 1.3e-06 57.8 155 30.3
EL10Ac7g16344 Beta vulgaris HOM05D000060 ORTHO05D000082 1.7e-06 57.4 56 57.1
BraA01t04015Z Brassica rapa HOM05D000060 ORTHO05D000082 1.7e-06 57.4 167 32.9
PSO210G7493 Papaver somniferum HOM05D000060 ORTHO05D000082 1.7e-06 57.4 125 36.8
Rhsim08G0234200 Rhododendron simsii HOM05D000060 ORTHO05D000082 1.7e-06 57.4 165 33.3
Atru.chr1.3758 Acer truncatum HOM05D000060 ORTHO05D000082 2.2e-06 57.0 191 30.4
Haze_18175 Corylus avellana HOM05D000060 ORTHO05D000082 2.2e-06 57.0 228 28.9
Haze_18182 Corylus avellana HOM05D000060 ORTHO05D000082 2.2e-06 57.0 228 28.9
Duzib187G1095 Durio zibethinus HOM05D000060 ORTHO05D000082 2.2e-06 57.0 41 61.0
COL.COLO4_30671 Corchorus olitorius HOM05D000060 ORTHO05D000082 2.9e-06 56.6 33 75.8
Lj5C44T11 Lonicera japonica HOM05D000060 ORTHO05D000082 2.9e-06 56.6 130 35.4
THA.LOC104822638 Tarenaya hassleriana HOM05D000060 ORTHO05D000082 3.8e-06 56.2 158 30.4
BcaC05g29153 Brassica carinata HOM05D000060 ORTHO05D000082 5.0e-06 55.8 130 34.6
C05p53940 Brassica napus HOM05D000060 ORTHO05D000082 5.0e-06 55.8 130 34.6
BolC5t34060H Brassica oleracea HOM05D000060 ORTHO05D000082 5.0e-06 55.8 130 34.6
Lsat_1_v5_gn_5_159541 Lactuca sativa HOM05D000060 ORTHO05D000082 5.0e-06 55.8 115 37.4
Gohir.A06G190801 Gossypium hirsutum HOM05D000060 ORTHO05D000082 6.5e-06 55.5 68 48.5
Sopen06g022110 Solanum pennellii HOM05D000060 ORTHO05D000082 6.5e-06 55.5 149 31.5
THA.LOC104810337 Tarenaya hassleriana HOM05D000060 ORTHO05D000082 8.5e-06 55.1 44 61.4


User provided reference genes

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