Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_23263_v3 Cicer arietinum L. HOM05D006741 ORTHO05D008434 1.7e-252 875.5 449 100.0
Ca_23272_v3 Cicer arietinum L. HOM05D006741 ORTHO05D008434 1.7e-252 875.5 449 100.0
Medtr8g014490 Medicago truncatula HOM05D006741 ORTHO05D008434 8.3e-175 617.5 452 73.2
TPR.G26946 Trifolium pratense HOM05D006741 ORTHO05D008434 4.7e-170 601.7 490 69.0
Psat4g197400 Pisum sativum HOM05D006741 ORTHO05D008434 2.8e-162 575.9 447 70.5
Lj3g0008384 Lotus japonicus HOM05D006741 ORTHO05D008434 6.9e-137 491.5 465 60.6
Lalb_Chr01g0013161 Lupinus albus HOM05D006741 ORTHO05D008434 5.8e-128 461.8 440 61.1
arahy.Tifrunner.gnm1.ann1.CS2PXA Arachis hypogaea HOM05D006741 ORTHO05D008434 1.2e-112 411.0 455 54.9
arahy.Tifrunner.gnm1.ann1.X4D5DL Arachis hypogaea HOM05D006741 ORTHO05D008434 3.4e-112 409.5 460 53.5
Glyma.08G200900 Glycine max HOM05D006741 ORTHO05D008434 1.8e-105 387.1 421 55.1
Glyma.07G015400 Glycine max HOM05D006741 ORTHO05D008434 8.5e-103 378.3 417 54.9
QL05p019947 Quercus lobata HOM05D006741 ORTHO05D008434 3.5e-96 356.3 458 50.2
CiPaw.01G231300 Carya illinoinensis HOM05D006741 ORTHO05D008434 4.5e-96 355.9 476 48.9
VMungo0331G0583 Vigna mungo HOM05D006741 ORTHO05D008434 7.2e-94 348.6 454 50.0
Phvul.010G145200 Phaseolus vulgaris HOM05D006741 ORTHO05D008434 1.6e-93 347.4 452 49.1
Manes.11G033400 Manihot esculenta HOM05D006741 ORTHO05D008434 1.3e-90 337.8 444 47.5
Cfa003646 Carpinus fangiana HOM05D006741 ORTHO05D008434 8.2e-90 335.1 477 46.1
Thecc.06G100200 Theobroma cacao HOM05D006741 ORTHO05D008434 1.8e-89 334.0 480 47.3
Haze_15849 Corylus avellana HOM05D006741 ORTHO05D008434 5.3e-89 332.4 435 48.0
Duzib235G1269 Durio zibethinus HOM05D006741 ORTHO05D008434 3.8e-87 326.2 478 45.8
Sabra05G0046800 Salix brachista HOM05D006741 ORTHO05D008434 2.5e-86 323.6 455 45.9
COL.COLO4_30514 Corchorus olitorius HOM05D006741 ORTHO05D008434 1.6e-85 320.9 475 44.2
Cpa.g.sc25.10 Carica papaya HOM05D006741 ORTHO05D008434 2.1e-85 320.5 459 45.8
Potri.005G053300 Populus trichocarpa HOM05D006741 ORTHO05D008434 2.7e-85 320.1 438 45.7
CSS0034583 Camellia sinensis var. sinensis HOM05D006741 ORTHO05D008434 4.7e-85 319.3 472 47.7
CSS0005978 Camellia sinensis var. sinensis HOM05D006741 ORTHO05D008434 1.4e-84 317.8 472 47.5
Potri.013G040800 Populus trichocarpa HOM05D006741 ORTHO05D008434 2.3e-84 317.0 435 45.3
Duzib192G0766 Durio zibethinus HOM05D006741 ORTHO05D008434 1.3e-82 311.2 479 44.5
Gohir.A06G189500 Gossypium hirsutum HOM05D006741 ORTHO05D008434 1.3e-82 311.2 481 43.9
TAR636G1866 Trochodendron aralioides HOM05D006741 ORTHO05D008434 2.8e-82 310.1 453 45.3
Atru.chr1.3525 Acer truncatum HOM05D006741 ORTHO05D008434 8.3e-82 308.5 470 45.3
Actinidia09006 Actinidia chinensis HOM05D006741 ORTHO05D008434 2.4e-81 307.0 476 42.6
Gorai.010G230700 Gossypium raimondii HOM05D006741 ORTHO05D008434 9.1e-81 305.1 478 43.9
Gohir.D06G197900 Gossypium hirsutum HOM05D006741 ORTHO05D008434 2.7e-80 303.5 478 43.7
TWI75G1374 Tripterygium wilfordii HOM05D006741 ORTHO05D008434 4.0e-76 289.7 463 43.0
Sabra13G0037700 Salix brachista HOM05D006741 ORTHO05D008434 5.2e-76 289.3 422 44.1
Dinv30435 Davidia involucrata HOM05D006741 ORTHO05D008434 1.3e-74 284.6 428 46.5
Actinidia39136 Actinidia chinensis HOM05D006741 ORTHO05D008434 1.7e-74 284.3 477 41.5
MD17G1183900 Malus domestica HOM05D006741 ORTHO05D008434 2.2e-74 283.9 456 44.7
PGR102G3207 Punica granatum HOM05D006741 ORTHO05D008434 6.3e-74 282.3 461 44.0
Prupe.3G058900 Prunus persica HOM05D006741 ORTHO05D008434 1.4e-73 281.2 446 43.7
Rhsim08G0227700 Rhododendron simsii HOM05D006741 ORTHO05D008434 4.1e-73 279.6 469 42.6
MD09G1202700 Malus domestica HOM05D006741 ORTHO05D008434 2.7e-72 276.9 444 43.7
Nn6g35322 Nelumbo nucifera HOM05D006741 ORTHO05D008434 5.9e-72 275.8 467 41.5
vmacro17014 Vaccinium macrocarpon HOM05D006741 ORTHO05D008434 1.0e-71 275.0 478 42.3
Hund28870 Selenicereus undatus HOM05D006741 ORTHO05D008434 1.7e-71 274.2 437 42.6
Eucgr.J02937 Eucalyptus grandis HOM05D006741 ORTHO05D008434 1.5e-70 271.2 420 45.0
CANSAT56G2677 Cannabis sativa HOM05D006741 ORTHO05D008434 4.2e-70 269.6 470 41.5
Hund28829 Selenicereus undatus HOM05D006741 ORTHO05D008434 1.2e-69 268.1 439 42.4
Sc12g0010170 Simmondsia chinensis HOM05D006741 ORTHO05D008434 4.7e-69 266.2 476 41.2
Oeu017120.1 Olea europaea HOM05D006741 ORTHO05D008434 6.1e-69 265.8 472 40.3
MELO3C013001.2 Cucumis melo HOM05D006741 ORTHO05D008434 2.6e-67 260.4 473 42.1
CsaV3_3G023590 Cucumis sativus L. HOM05D006741 ORTHO05D008434 1.3e-66 258.1 497 39.8
Sed0020930 Sechium edule HOM05D006741 ORTHO05D008434 2.0e-64 250.8 483 41.0
Ciclev10027417m.g Citrus clementina HOM05D006741 ORTHO05D008434 1.5e-62 244.6 441 39.7
DCAR_023081 Daucus carota HOM05D006741 ORTHO05D008434 3.3e-62 243.4 477 37.7
Migut.I00896 Erythranthe guttata HOM05D006741 ORTHO05D008434 4.3e-62 243.0 427 40.3
PSO210G4778 Papaver somniferum HOM05D006741 ORTHO05D008434 1.4e-60 238.0 462 37.9
PSO210G6928 Papaver somniferum HOM05D006741 ORTHO05D008434 1.4e-60 238.0 462 37.9
MSTRG.11026 Avicennia marina HOM05D006741 ORTHO05D008434 8.9e-60 235.3 456 40.4
THA.LOC104806335 Tarenaya hassleriana HOM05D006741 ORTHO05D008434 1.2e-59 235.0 455 39.3
AUR62031924 Chenopodium quinoa HOM05D006741 ORTHO05D008434 1.5e-59 234.6 436 39.2
ClCG07G013320 Citrullus lanatus HOM05D006741 ORTHO05D008434 1.5e-59 234.6 538 37.9
CARHR253650 Cardamine hirsuta HOM05D006741 ORTHO05D008434 2.9e-58 230.3 450 39.1
SGA_v2.0_scaffold69G23318 Striga asiatica HOM05D006741 ORTHO05D008434 4.9e-58 229.6 440 40.5
GSVIVG01016979001 Vitis vinifera HOM05D006741 ORTHO05D008434 5.4e-57 226.1 453 38.6
Cc04_g02540 Coffea canephora HOM05D006741 ORTHO05D008434 7.0e-57 225.7 438 39.3
RcHm_v2.0_Chr2g0140551 Rosa chinensis HOM05D006741 ORTHO05D008434 7.8e-56 222.2 476 40.3
Carub.0006s3171 Capsella rubella HOM05D006741 ORTHO05D008434 1.0e-55 221.9 440 37.0
Nitab4.5_0001172g0120 Nicotiana tabacum HOM05D006741 ORTHO05D008434 1.0e-55 221.9 484 38.2
MBI01_g10133_MAGBIO Magnolia biondii HOM05D006741 ORTHO05D008434 3.0e-55 220.3 481 36.8
Aqoxy7G03978 Aquilegia oxysepala HOM05D006741 ORTHO05D008434 1.5e-54 218.0 487 35.5
AL6G47480 Arabidopsis lyrata HOM05D006741 ORTHO05D008434 2.5e-54 217.2 454 36.1
FvH4_6g32410 Fragaria vesca HOM05D006741 ORTHO05D008434 2.5e-54 217.2 438 38.8
PGSC0003DMG400026441 Solanum tuberosum HOM05D006741 ORTHO05D008434 3.3e-54 216.9 533 35.8
Ah.01g005790 Amaranthus hybridus HOM05D006741 ORTHO05D008434 4.3e-54 216.5 445 37.5
FAN14G5382 Fragaria x ananassa HOM05D006741 ORTHO05D008434 7.3e-54 215.7 450 38.7
FAN02G4526 Fragaria x ananassa HOM05D006741 ORTHO05D008434 6.2e-53 212.6 448 38.6
Aa31LG9G10130 Aethionema arabicum HOM05D006741 ORTHO05D008434 1.1e-52 211.8 446 37.2
Thhalv10028639m.g Eutrema salsugineum HOM05D006741 ORTHO05D008434 1.8e-52 211.1 447 36.5
Peaxi162Scf00177g00125 Petunia axillaris HOM05D006741 ORTHO05D008434 5.2e-52 209.5 461 36.7
AT4G12540 Arabidopsis thaliana HOM05D006741 ORTHO05D008434 8.9e-52 208.8 455 35.4
Sp6g04980 Schrenkiella parvula HOM05D006741 ORTHO05D008434 2.0e-51 207.6 461 35.8
SpUn0055_0020 Schrenkiella parvula HOM05D006741 ORTHO05D008434 2.0e-51 207.6 461 35.8
EL10Ac3g05317 Beta vulgaris HOM05D006741 ORTHO05D008434 2.2e-50 204.1 471 36.1
A09p26830 Brassica napus HOM05D006741 ORTHO05D008434 2.9e-50 203.8 450 38.0
FAN05G1069 Fragaria x ananassa HOM05D006741 ORTHO05D008434 2.9e-50 203.8 442 37.8
Solyc12g044620.2 Solanum lycopersicum HOM05D006741 ORTHO05D008434 3.2e-49 200.3 526 35.9
Lj9A513G60 Lonicera japonica HOM05D006741 ORTHO05D008434 5.4e-49 199.5 417 38.1
ClCG00G003340 Citrullus lanatus HOM05D006741 ORTHO05D008434 9.2e-49 198.7 449 37.2
BcaC04g21238 Brassica carinata HOM05D006741 ORTHO05D008434 6.0e-48 196.1 458 37.1
C09p34000 Brassica napus HOM05D006741 ORTHO05D008434 6.0e-48 196.1 458 37.1
BolC9t56238H Brassica oleracea HOM05D006741 ORTHO05D008434 6.0e-48 196.1 458 37.1
HanXRQChr09g0276261 Helianthus annuus HOM05D006741 ORTHO05D008434 6.0e-48 196.1 459 37.0
BraA09t38254Z Brassica rapa HOM05D006741 ORTHO05D008434 7.8e-48 195.7 460 38.0
Nitab4.5_0004241g0050 Nicotiana tabacum HOM05D006741 ORTHO05D008434 1.7e-47 194.5 473 36.2
Sopen12g023080 Solanum pennellii HOM05D006741 ORTHO05D008434 3.9e-47 193.4 521 35.5
ECA232G4726 Erigeron canadensis HOM05D006741 ORTHO05D008434 1.8e-44 184.5 468 34.6
Lsat_1_v5_gn_4_97420 Lactuca sativa HOM05D006741 ORTHO05D008434 5.2e-44 183.0 449 34.3
Nn8g39070 Nelumbo nucifera HOM05D006741 ORTHO05D008434 1.2e-43 181.8 392 36.2
FAN09G4229 Fragaria x ananassa HOM05D002451 ORTHO05D005601 1.1e-41 175.3 436 35.1
Dinv37976 Davidia involucrata HOM05D006741 ORTHO05D008434 2.1e-40 171.0 248 47.6
Hma1.2p1_0430F.1_g151390 Hydrangea macrophylla HOM05D006741 ORTHO05D008434 5.1e-39 166.4 429 33.8
Cpa.g.sc25.28 Carica papaya HOM05D006741 ORTHO05D008434 2.0e-35 154.5 278 39.2
CDE02G1085 Ceratophyllum demersum HOM05D006741 ORTHO05D008434 4.9e-34 149.8 454 32.8
TAR624G0518 Trochodendron aralioides HOM05D006741 ORTHO05D008434 9.3e-33 145.6 255 38.8
ATR0705G093 Amborella trichopoda HOM05D006741 ORTHO05D008434 1.1e-25 122.1 381 30.4
Os05g0532500 Oryza sativa ssp. japonica HOM05D006741 ORTHO05D008434 1.1e-25 122.1 477 28.1
CDE04G0136 Ceratophyllum demersum HOM05D006741 ORTHO05D008434 7.9e-16 89.4 227 34.8
unitig_748.g7440 Utricularia gibba HOM05D006741 ORTHO05D008434 1.0e-15 89.0 165 36.4
Zm00001eb353790 Zea mays HOM05D006741 ORTHO05D008434 3.3e-14 84.0 348 28.4
BcaC01g04588 Brassica carinata HOM05D006741 ORTHO05D008434 8.1e-13 79.3 289 30.8
unitig_748.g7441 Utricularia gibba HOM05D006741 ORTHO05D008434 5.3e-12 76.6 145 40.0


User provided reference genes

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