Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_23172_v3 Cicer arietinum L. HOM05D007511 ORTHO05D003753 4.2e-92 341.3 164 100.0
Medtr8g011160 Medicago truncatula HOM05D007511 ORTHO05D003753 8.3e-48 194.1 173 63.0
Psat4g207240 Pisum sativum HOM05D007511 ORTHO05D003753 1.8e-47 193.0 167 62.3
TPR.G24583 Trifolium pratense HOM05D007511 ORTHO05D003753 8.6e-45 184.1 175 60.0
Psat0s409g0080 Pisum sativum HOM05D007511 ORTHO05D003753 1.4e-39 166.8 164 55.5
Lj3g0008746 Lotus japonicus HOM05D007511 ORTHO05D003753 1.3e-37 160.2 168 53.6
Glyma.16G082300 Glycine max HOM05D007511 ORTHO05D003753 5.0e-29 131.7 167 52.1
Lalb_Chr07g0194541 Lupinus albus HOM05D007511 ORTHO05D003753 3.1e-26 122.5 134 52.2
Glyma.03G092200 Glycine max HOM05D007511 ORTHO05D003753 6.4e-24 114.8 154 50.0
Medtr8g010740 Medicago truncatula HOM05D007511 ORTHO05D003753 2.4e-23 112.8 126 56.3
TWI60G1247 Tripterygium wilfordii HOM05D007511 ORTHO05D003753 3.2e-23 112.5 127 47.2
TWI34G0987 Tripterygium wilfordii HOM05D007511 ORTHO05D003753 1.6e-22 110.2 153 44.4
CiPaw.02G046500 Carya illinoinensis HOM05D007511 ORTHO05D003753 4.6e-22 108.6 127 45.7
MD07G1077000 Malus domestica HOM05D007511 ORTHO05D003753 6.0e-22 108.2 177 40.1
Prupe.2G098000 Prunus persica HOM05D007511 ORTHO05D003753 8.6e-21 104.4 176 40.3
MD02G1239600 Malus domestica HOM05D007511 ORTHO05D003753 3.3e-20 102.4 178 38.8
Ciclev10033674m.g Citrus clementina HOM05D007511 ORTHO05D003753 4.0e-18 95.5 162 38.3
Duzib177G0499 Durio zibethinus HOM05D007511 ORTHO05D003753 4.0e-18 95.5 158 41.1
Manes.08G158000 Manihot esculenta HOM05D007511 ORTHO05D003753 2.0e-17 93.2 135 40.0
Potri.019G043701 Populus trichocarpa HOM05D007511 ORTHO05D003753 7.6e-17 91.3 163 36.8
TAR629G3237 Trochodendron aralioides HOM05D007511 ORTHO05D003753 2.2e-16 89.7 129 40.3
FAN01G1810 Fragaria x ananassa HOM05D007511 ORTHO05D003753 2.9e-16 89.4 168 36.9
Sabra19G0054300 Salix brachista HOM05D007511 ORTHO05D003753 3.8e-16 89.0 151 39.7
FAN03G1709 Fragaria x ananassa HOM05D007511 ORTHO05D003753 4.9e-16 88.6 167 37.7
Nn1g09148 Nelumbo nucifera HOM05D007511 ORTHO05D003753 4.9e-16 88.6 65 55.4
Cfa000931 Carpinus fangiana HOM05D007511 ORTHO05D003753 6.4e-16 88.2 111 44.1
Eucgr.D00980 Eucalyptus grandis HOM05D007511 ORTHO05D003753 6.4e-16 88.2 145 38.6
Nn3g19224 Nelumbo nucifera HOM05D007511 ORTHO05D003753 6.4e-16 88.2 129 38.0
FvH4_7g07110 Fragaria vesca HOM05D007511 ORTHO05D003753 1.1e-15 87.4 169 37.3
PSO063G5504 Papaver somniferum HOM05D007511 ORTHO05D003753 1.1e-15 87.4 67 55.2
PSO782G3115 Papaver somniferum HOM05D007511 ORTHO05D003753 1.1e-15 87.4 67 53.7
FAN06G3938 Fragaria x ananassa HOM05D007511 ORTHO05D003753 1.4e-15 87.0 170 36.5
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 1.4e-15 87.0 188 37.2
Sed0019168 Sechium edule HOM05D007511 ORTHO05D003753 2.4e-15 86.3 154 36.4
CsaV3_2G011030 Cucumis sativus L. HOM05D007511 ORTHO05D003753 4.2e-15 85.5 126 37.3
RcHm_v2.0_Chr1g0337051 Rosa chinensis HOM05D007511 ORTHO05D003753 7.1e-15 84.7 166 34.3
Nn1g08946 Nelumbo nucifera HOM05D001418 ORTHO05D003753 1.6e-14 83.6 64 54.7
Atru.chr2.1724 Acer truncatum HOM05D007511 ORTHO05D003753 2.7e-14 82.8 162 36.4
Aa31LG11G12060 Aethionema arabicum HOM05D007511 ORTHO05D003753 3.5e-14 82.4 164 36.6
Lalb_Chr13g0290981 Lupinus albus HOM05D007511 ORTHO05D003753 6.0e-14 81.6 153 41.8
TAR625G0656 Trochodendron aralioides HOM05D001418 ORTHO05D003753 1.0e-13 80.9 122 37.7
Duzib128G1432 Durio zibethinus HOM05D007511 ORTHO05D003753 1.3e-13 80.5 157 35.0
Sp6g26630 Schrenkiella parvula HOM05D007511 ORTHO05D003753 1.7e-13 80.1 152 36.2
Phvul.010G032800 Phaseolus vulgaris HOM05D007511 ORTHO05D003753 2.3e-13 79.7 68 51.5
Thhalv10015688m.g Eutrema salsugineum HOM05D007511 ORTHO05D003753 3.0e-13 79.3 164 32.9
PGR004G1271 Punica granatum HOM05D007511 ORTHO05D003753 3.9e-13 79.0 131 35.1
Gohir.D11G235550 Gossypium hirsutum HOM05D007511 ORTHO05D003753 5.1e-13 78.6 132 36.4
Manes.12G158100 Manihot esculenta HOM05D001418 ORTHO05D003753 5.1e-13 78.6 144 35.4
AT5G17590 Arabidopsis thaliana HOM05D007511 ORTHO05D003753 1.5e-12 77.0 134 35.1
CARHR195590 Cardamine hirsuta HOM05D007511 ORTHO05D003753 3.3e-12 75.9 134 32.8
Gorai.007G248300 Gossypium raimondii HOM05D007511 ORTHO05D003753 3.3e-12 75.9 130 36.2
Gohir.A11G221900 Gossypium hirsutum HOM05D007511 ORTHO05D003753 5.6e-12 75.1 132 35.6
THA.LOC104802898 Tarenaya hassleriana HOM05D007511 ORTHO05D003753 7.3e-12 74.7 147 35.4
Carub.0006s1583 Capsella rubella HOM05D007511 ORTHO05D003753 9.6e-12 74.3 138 36.2
TAR381G0240 Trochodendron aralioides HOM05D001418 ORTHO05D004504 1.2e-11 73.9 182 31.9
CANSAT35G2046 Cannabis sativa HOM05D007511 ORTHO05D003753 1.6e-11 73.6 65 56.9
MBI06_g35216_MAGBIO Magnolia biondii HOM05D007511 ORTHO05D003753 1.6e-11 73.6 63 54.0
C02p09200 Brassica napus HOM05D007511 ORTHO05D003753 2.8e-11 72.8 126 37.3
Hma1.2p1_0353F.1_g133330 Hydrangea macrophylla HOM05D007511 ORTHO05D003753 2.8e-11 72.8 100 34.0
AL6G28680 Arabidopsis lyrata HOM05D007511 ORTHO05D003753 6.2e-11 71.6 154 34.4
Oeu032775.1 Olea europaea HOM05D007511 ORTHO05D003753 6.2e-11 71.6 129 34.1
A02p04350 Brassica napus HOM05D007511 ORTHO05D003753 1.4e-10 70.5 126 36.5
BraA02t05399Z Brassica rapa HOM05D007511 ORTHO05D003753 1.4e-10 70.5 126 36.5
TAR628G0376 Trochodendron aralioides HOM05D001418 ORTHO05D003753 1.4e-10 70.5 152 30.3
BcaC03g13529 Brassica carinata HOM05D007511 ORTHO05D003753 2.4e-10 69.7 126 35.7
BolC2t06828H Brassica oleracea HOM05D007511 ORTHO05D003753 2.4e-10 69.7 126 35.7
Cpa.g.sc73.86 Carica papaya HOM05D007511 ORTHO05D003753 4.0e-10 68.9 197 31.5
Atru.chr4.944 Acer truncatum HOM05D001418 ORTHO05D003753 1.5e-09 67.0 64 46.9
Oeu024951.1 Olea europaea HOM05D007511 ORTHO05D003753 2.0e-09 66.6 121 33.1
BcaB08g36759 Brassica carinata HOM05D007511 ORTHO05D003753 2.6e-09 66.2 174 33.9
ATR1001G015 Amborella trichopoda HOM05D007511 ORTHO05D003753 3.4e-09 65.9 139 31.7
BolC9t58796H Brassica oleracea HOM05D007511 ORTHO05D003753 3.4e-09 65.9 153 34.0
Thecc.05G230200 Theobroma cacao HOM05D007511 ORTHO05D003753 4.4e-09 65.5 138 35.5
vmacro13587 Vaccinium macrocarpon HOM05D007511 ORTHO05D003753 5.8e-09 65.1 128 33.6
HPP92_004456 Vanilla planifolia HOM05D001418 ORTHO05D003753 5.8e-09 65.1 134 38.8
Hma1.2p1_0915F.1_g236420 Hydrangea macrophylla HOM05D007511 ORTHO05D003753 7.6e-09 64.7 65 44.6
Sed0024034 Sechium edule HOM05D001418 ORTHO05D003753 9.9e-09 64.3 62 50.0
QL04p052194 Quercus lobata HOM05D007511 ORTHO05D003753 1.3e-08 63.9 115 37.4
BcaC04g18776 Brassica carinata HOM05D007511 ORTHO05D003753 1.7e-08 63.5 153 33.3
C09p59570 Brassica napus HOM05D007511 ORTHO05D003753 1.7e-08 63.5 153 33.3
Rhsim07G0046200 Rhododendron simsii HOM05D007511 ORTHO05D003753 1.7e-08 63.5 119 34.5
Lsat_1_v5_gn_7_35641 Lactuca sativa HOM05D007511 ORTHO05D003753 4.9e-08 62.0 81 38.3
TPR.G37392 Trifolium pratense HOM05D001418 ORTHO05D003753 4.9e-08 62.0 60 50.0
SGA_v2.0_scaffold5G03086 Striga asiatica HOM05D007511 ORTHO05D003753 6.4e-08 61.6 110 32.7
Nitab4.5_0004800g0110 Nicotiana tabacum HOM05D000001 ORTHO05D011953 1.1e-07 60.8 142 31.0
PGSC0003DMG400043768 Solanum tuberosum HOM05D007511 ORTHO05D003753 1.1e-07 60.8 68 41.2
HPP92_025164 Vanilla planifolia HOM05D001418 ORTHO05D003753 1.1e-07 60.8 63 46.0
HPP92_025177 Vanilla planifolia HOM05D001418 ORTHO05D003753 1.1e-07 60.8 63 46.0
A10p21820 Brassica napus HOM05D007511 ORTHO05D003753 1.4e-07 60.5 156 32.7
Sc16g0009500 Simmondsia chinensis HOM05D001418 ORTHO05D003753 1.4e-07 60.5 128 33.6
Sopen01g032800 Solanum pennellii HOM05D007511 ORTHO05D003753 1.4e-07 60.5 68 41.2
MELO3C023225.2 Cucumis melo HOM05D001418 ORTHO05D003753 1.9e-07 60.1 62 46.8
BolC3t13471H Brassica oleracea HOM05D007511 ORTHO05D003753 2.4e-07 59.7 64 40.6
BraA10t44242Z Brassica rapa HOM05D007511 ORTHO05D003753 3.2e-07 59.3 174 31.0
ClCG02G000350 Citrullus lanatus HOM05D001418 ORTHO05D003753 4.2e-07 58.9 62 41.9
Lalb_Chr07g0184281 Lupinus albus HOM05D001418 ORTHO05D003753 4.2e-07 58.9 60 45.0
Rhsim01G0134200 Rhododendron simsii HOM05D007511 ORTHO05D003753 4.2e-07 58.9 137 32.8
Rhsim01G0134700 Rhododendron simsii HOM05D000002 ORTHO05D000001 5.4e-07 58.5 137 32.8
Medtr8g094040 Medicago truncatula HOM05D001418 ORTHO05D003753 7.1e-07 58.2 60 40.0
PGR102G3103 Punica granatum HOM05D001418 ORTHO05D003753 7.1e-07 58.2 64 42.2
Ah.06g190930 Amaranthus hybridus HOM05D001418 ORTHO05D003753 9.3e-07 57.8 135 31.1
Aqoxy5G00551 Aquilegia oxysepala HOM05D007511 ORTHO05D003753 9.3e-07 57.8 58 46.6
Ciclev10003211m.g Citrus clementina HOM05D001418 ORTHO05D003753 9.3e-07 57.8 62 45.2
Migut.B01440 Erythranthe guttata HOM05D007511 ORTHO05D003753 9.3e-07 57.8 66 33.3
Ah.02g114820 Amaranthus hybridus HOM05D001418 ORTHO05D003753 1.2e-06 57.4 126 29.4
Glyma.06G155400 Glycine max HOM05D001418 ORTHO05D003753 1.2e-06 57.4 62 41.9
Lalb_Chr12g0203061 Lupinus albus HOM05D001418 ORTHO05D003753 1.6e-06 57.0 60 43.3
Lalb_Chr13g0296701 Lupinus albus HOM05D001418 ORTHO05D003753 1.6e-06 57.0 60 45.0
Sed0004234 Sechium edule HOM05D001418 ORTHO05D003753 1.6e-06 57.0 62 41.9
CsaV3_2G019490 Cucumis sativus L. HOM05D001418 ORTHO05D003753 2.1e-06 56.6 62 40.3
QL10p041674 Quercus lobata HOM05D001418 ORTHO05D003753 2.1e-06 56.6 64 39.1
QL10p041864 Quercus lobata HOM05D001418 ORTHO05D003753 2.1e-06 56.6 64 39.1
Sopen10g009620 Solanum pennellii HOM05D007511 ORTHO05D025904 2.1e-06 56.6 68 38.2
TWI79G1507 Tripterygium wilfordii HOM05D001418 ORTHO05D003753 2.1e-06 56.6 165 30.3
Psat7g044600 Pisum sativum HOM05D001418 ORTHO05D003753 2.7e-06 56.2 56 44.6
Solyc10g024480.1 Solanum lycopersicum HOM05D007511 ORTHO05D003753 2.7e-06 56.2 68 38.2
CiPaw.03G118500 Carya illinoinensis HOM05D001418 ORTHO05D003753 3.5e-06 55.8 62 41.9
CANSAT01G1075 Cannabis sativa HOM05D001418 ORTHO05D003753 7.8e-06 54.7 67 38.8
Eucgr.H05149 Eucalyptus grandis HOM05D001418 ORTHO05D003753 7.8e-06 54.7 167 31.1


User provided reference genes

Program Settings