Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_23159_v3 Cicer arietinum L. HOM05D007112 ORTHO05D008930 5.3e-144 514.2 239 100.0
Medtr8g010140 Medicago truncatula HOM05D007112 ORTHO05D008930 4.1e-112 408.3 239 82.4
Psat4g208280 Pisum sativum HOM05D007112 ORTHO05D008930 2.1e-108 396.0 240 81.2
TPR.G17379 Trifolium pratense HOM05D007112 ORTHO05D008930 1.4e-104 383.3 233 81.5
LjContig00389g0002281 Lotus japonicus HOM05D007112 ORTHO05D008930 2.2e-97 359.4 235 75.3
Phvul.010G036300 Phaseolus vulgaris HOM05D007112 ORTHO05D008930 5.3e-96 354.8 242 73.1
Glyma.07G124300 Glycine max HOM05D007112 ORTHO05D008930 1.2e-95 353.6 242 73.6
Glyma.03G097000 Glycine max HOM05D007112 ORTHO05D008930 3.5e-95 352.1 245 73.9
VMungo0331G1777 Vigna mungo HOM05D007112 ORTHO05D008930 1.0e-94 350.5 242 72.7
Lalb_Chr07g0194661 Lupinus albus HOM05D007112 ORTHO05D008930 1.4e-88 330.1 247 68.8
arahy.Tifrunner.gnm1.ann1.T2R7SH Arachis hypogaea HOM05D007112 ORTHO05D008930 2.4e-88 329.3 237 70.9
arahy.Tifrunner.gnm1.ann1.X2Q8CL Arachis hypogaea HOM05D007112 ORTHO05D008930 4.9e-81 305.1 236 66.9
TAR362G0557 Trochodendron aralioides HOM05D007112 ORTHO05D008930 7.3e-69 264.6 225 58.2
RcHm_v2.0_Chr6g0282211 Rosa chinensis HOM05D007112 ORTHO05D008930 2.1e-68 263.1 222 57.2
FAN15G3611 Fragaria x ananassa HOM05D007112 ORTHO05D008930 2.6e-66 256.1 222 56.8
Atru.chr6.3529 Acer truncatum HOM05D007112 ORTHO05D008930 4.4e-66 255.4 228 58.3
Ciclev10016325m.g Citrus clementina HOM05D007112 ORTHO05D008930 1.3e-65 253.8 236 57.2
FvH4_2g17490 Fragaria vesca HOM05D007112 ORTHO05D008930 3.7e-65 252.3 222 55.9
Cfa017735 Carpinus fangiana HOM05D007112 ORTHO05D008930 6.4e-65 251.5 223 58.3
MD05G1153700 Malus domestica HOM05D007112 ORTHO05D008930 8.3e-65 251.1 228 57.0
Prupe.8G187100 Prunus persica HOM05D007112 ORTHO05D008930 1.1e-64 250.8 232 57.3
GSVIVG01001529001 Vitis vinifera HOM05D007112 ORTHO05D008930 2.4e-64 249.6 228 55.3
Duzib133G1446 Durio zibethinus HOM05D007112 ORTHO05D008930 3.5e-63 245.7 224 54.9
Dinv28792 Davidia involucrata HOM05D007112 ORTHO05D008930 6.0e-63 245.0 221 55.7
Sabra14G0134200 Salix brachista HOM05D007112 ORTHO05D008930 6.6e-62 241.5 224 56.7
ClCG09G008370 Citrullus lanatus HOM05D007112 ORTHO05D008930 1.1e-61 240.7 227 55.1
CsaV3_7G026720 Cucumis sativus L. HOM05D007112 ORTHO05D008930 1.1e-61 240.7 229 55.0
Rhsim01G0247600 Rhododendron simsii HOM05D007112 ORTHO05D008930 1.9e-61 240.0 229 55.5
CARHR082180 Cardamine hirsuta HOM05D007112 ORTHO05D008930 4.3e-61 238.8 235 51.9
COL.COLO4_34270 Corchorus olitorius HOM05D007112 ORTHO05D008930 5.6e-61 238.4 223 52.9
Hma1.2p1_1043F.1_g251280 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 5.6e-61 238.4 230 55.7
Carub.0003s0707 Capsella rubella HOM05D007112 ORTHO05D008930 7.3e-61 238.0 223 56.1
Oeu013523.1 Olea europaea HOM05D007112 ORTHO05D008930 7.3e-61 238.0 234 55.6
Gorai.001G227200 Gossypium raimondii HOM05D007112 ORTHO05D008930 1.2e-60 237.3 218 55.5
Aa31LG5G18060 Aethionema arabicum HOM05D007112 ORTHO05D008930 2.1e-60 236.5 221 54.8
ECA247G2139 Erigeron canadensis HOM05D000092 ORTHO05D008930 2.8e-60 236.1 225 55.6
Lj2A1111T23 Lonicera japonica HOM05D007112 ORTHO05D008930 2.8e-60 236.1 247 52.2
Gohir.A07G195600 Gossypium hirsutum HOM05D007112 ORTHO05D008930 6.2e-60 235.0 225 52.9
Gohir.D07G202200 Gossypium hirsutum HOM05D007112 ORTHO05D008930 6.2e-60 235.0 221 54.8
Sp3g06430 Schrenkiella parvula HOM05D007112 ORTHO05D008930 8.1e-60 234.6 222 55.9
AT3G07525 Arabidopsis thaliana HOM05D007112 ORTHO05D008930 1.1e-59 234.2 224 54.9
TWI36G0064 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 1.1e-59 234.2 227 52.4
THA.LOC104819012 Tarenaya hassleriana HOM05D007112 ORTHO05D008930 1.4e-59 233.8 224 53.6
Thhalv10022158m.g Eutrema salsugineum HOM05D007112 ORTHO05D008930 1.8e-59 233.4 222 55.0
SalBow3G4154 Salvia bowleyana HOM05D007112 ORTHO05D008930 1.8e-59 233.4 238 52.9
MSTRG.18505 Avicennia marina HOM05D007112 ORTHO05D008930 5.2e-59 231.9 232 52.6
BcaC05g29544 Brassica carinata HOM05D007112 ORTHO05D008930 6.8e-59 231.5 219 54.3
HanXRQChr08g0231791 Helianthus annuus HOM05D007112 ORTHO05D008930 6.8e-59 231.5 222 55.4
Thecc.01G207600 Theobroma cacao HOM05D007112 ORTHO05D008930 8.9e-59 231.1 228 52.2
Sed0011312 Sechium edule HOM05D007112 ORTHO05D008930 2.6e-58 229.6 224 53.6
PSO675G4719 Papaver somniferum HOM05D007112 ORTHO05D008930 5.8e-58 228.4 252 49.2
BraA05t22800Z Brassica rapa HOM05D007112 ORTHO05D008930 7.5e-58 228.0 220 53.2
Migut.D00774 Erythranthe guttata HOM05D007112 ORTHO05D008930 7.5e-58 228.0 235 50.2
A05p40690 Brassica napus HOM05D007112 ORTHO05D008930 1.3e-57 227.3 219 53.4
FAN24G0137 Fragaria x ananassa HOM05D007112 ORTHO05D008930 1.7e-57 226.9 230 50.9
BolC5t34634H Brassica oleracea HOM05D007112 ORTHO05D008930 4.9e-57 225.3 220 53.2
C05p59800 Brassica napus HOM05D007112 ORTHO05D008930 1.1e-56 224.2 218 52.8
Nitab4.5_0000038g0350 Nicotiana tabacum HOM05D007112 ORTHO05D008930 9.2e-56 221.1 229 48.0
QL05p089159 Quercus lobata HOM05D007112 ORTHO05D008930 9.2e-56 221.1 225 52.9
Nitab4.5_0010469g0020 Nicotiana tabacum HOM05D007112 ORTHO05D008930 2.1e-55 219.9 233 48.1
PSO732G0401 Papaver somniferum HOM05D007112 ORTHO05D008930 2.1e-55 219.9 250 47.2
CSS0005940 Camellia sinensis var. sinensis HOM05D007112 ORTHO05D008930 6.0e-55 218.4 222 52.7
Lsat_1_v5_gn_9_16901 Lactuca sativa HOM05D007112 ORTHO05D008930 1.3e-54 217.2 223 51.6
vmacro14688 Vaccinium macrocarpon HOM05D007112 ORTHO05D008930 1.7e-54 216.9 223 53.4
Solyc09g047840.3 Solanum lycopersicum HOM05D007112 ORTHO05D008930 3.0e-54 216.1 221 49.8
Aqoxy5G04050 Aquilegia oxysepala HOM05D007112 ORTHO05D008930 5.1e-54 215.3 228 50.0
Sopen09g015950 Solanum pennellii HOM05D007112 ORTHO05D008930 1.5e-53 213.8 221 48.9
Eucgr.K02360 Eucalyptus grandis HOM05D007112 ORTHO05D008930 1.9e-53 213.4 221 50.2
PGSC0003DMG400021909 Solanum tuberosum HOM05D007112 ORTHO05D008930 1.9e-53 213.4 224 50.4
CANSAT01G1474 Cannabis sativa HOM05D007112 ORTHO05D008930 3.3e-53 212.6 231 50.2
Peaxi162Scf02239g00022 Petunia axillaris HOM05D007112 ORTHO05D008930 3.3e-53 212.6 239 45.6
Actinidia23803 Actinidia chinensis HOM05D007112 ORTHO05D008930 4.3e-53 212.2 222 50.0
AUR62008068 Chenopodium quinoa HOM05D007112 ORTHO05D008930 4.3e-53 212.2 229 49.8
Cc01_g15870 Coffea canephora HOM05D007112 ORTHO05D008930 1.4e-51 207.2 227 46.3
AUR62028645 Chenopodium quinoa HOM05D007112 ORTHO05D008930 3.1e-51 206.1 229 48.5
unitig_60.g25572 Utricularia gibba HOM05D007112 ORTHO05D008930 3.1e-51 206.1 221 50.2
SHI30551 Sapria himalayana HOM05D007112 ORTHO05D008930 6.8e-51 204.9 224 44.6
ATR0752G208 Amborella trichopoda HOM05D007112 ORTHO05D008930 8.9e-51 204.5 229 47.6
CiPaw.14G038400 Carya illinoinensis HOM05D007112 ORTHO05D008930 1.2e-50 204.1 190 55.8
Manes.13G056200 Manihot esculenta HOM05D007112 ORTHO05D008930 6.4e-49 198.4 171 59.1
Sc24g0003360 Simmondsia chinensis HOM05D007112 ORTHO05D008930 1.4e-48 197.2 227 45.4
PGR044G1116 Punica granatum HOM05D007112 ORTHO05D008930 1.9e-48 196.8 228 47.4
HPP92_001291 Vanilla planifolia HOM05D007112 ORTHO05D008930 2.4e-48 196.4 227 45.8
Hund02806 Selenicereus undatus HOM05D007112 ORTHO05D008930 4.1e-48 195.7 222 47.7
Nn7g37436 Nelumbo nucifera HOM05D007112 ORTHO05D008930 3.5e-47 192.6 161 59.6
Hma1.2p1_1043F.1_g251290 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 5.1e-46 188.7 138 65.9
Zm00001eb425740 Zea mays HOM05D007112 ORTHO05D008930 6.2e-44 181.8 221 46.2
MELO3C021125.2 Cucumis melo HOM05D007112 ORTHO05D008930 6.9e-43 178.3 179 52.5
CDE05G1497 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 3.4e-42 176.0 171 53.2
MBI10_g35388_MAGBIO Magnolia biondii HOM05D007112 ORTHO05D008930 3.8e-41 172.6 263 40.7
Ah.11g050810 Amaranthus hybridus HOM05D007112 ORTHO05D008930 1.3e-38 164.1 223 41.3
Os04g0497350 Oryza sativa ssp. japonica HOM05D007112 ORTHO05D008930 6.6e-38 161.8 218 42.7
CAN.G50.11 Capsicum annuum HOM05D007112 ORTHO05D008930 8.1e-36 154.8 123 58.5
Mapoly0002s0314 Marchantia polymorpha HOM05D007112 ORTHO05D008930 9.3e-32 141.4 271 31.4
HanXRQChr03g0082541 Helianthus annuus HOM05D007112 ORTHO05D008930 1.0e-30 137.9 101 66.3
DCAR_018609 Daucus carota HOM05D007112 ORTHO05D008930 3.9e-30 136.0 166 44.0
Pp3c26_2050 Physcomitrium patens HOM05D007112 ORTHO05D008930 2.4e-27 126.7 193 36.8
Haze_03375 Corylus avellana HOM05D007112 ORTHO05D008930 1.5e-26 124.0 151 45.0
Cpa.g.sc8.40 Carica papaya HOM05D007112 ORTHO05D008930 1.4e-24 117.5 131 48.1
AagrBONN_evm.TU.Sc2ySwM_344.2017 Anthoceros agrestis HOM05D007112 ORTHO05D008930 4.2e-24 115.9 192 36.5
MD10G1148000 Malus domestica HOM05D007112 ORTHO05D008930 3.5e-23 112.8 129 48.8
CDE05G2169 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 1.1e-16 91.3 215 33.5
EL10Ac5g10586 Beta vulgaris HOM05D007112 ORTHO05D008930 1.4e-16 90.9 76 57.9
SGA_v2.0_scaffold29G12307 Striga asiatica HOM05D007112 ORTHO05D008930 1.2e-15 87.8 150 38.0
EL10Ac5g10588 Beta vulgaris HOM05D007112 ORTHO05D008930 8.7e-14 81.6 61 62.3
SMO141G0021 Selaginella moellendorffii HOM05D007112 ORTHO05D008930 5.7e-13 79.0 117 32.5
Nn7g37443 Nelumbo nucifera HOM05D007112 ORTHO05D008930 9.0e-11 71.6 62 51.6
C04p34930 Brassica napus HOM05D007112 ORTHO05D008930 5.9e-10 68.9 111 37.8
TWI18G1453 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 1.0e-09 68.2 99 36.4
BolC4t25047H Brassica oleracea HOM05D007112 ORTHO05D027530 9.4e-08 61.6 148 31.8
Haze_03378 Corylus avellana HOM05D007112 ORTHO05D008930 3.0e-06 56.6 34 70.6


User provided reference genes

Program Settings