Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_23118_v3 Cicer arietinum L. HOM05D007700 ORTHO05D009669 6.5e-138 495.0 469 100.0
Psat4g208920 Pisum sativum HOM05D007700 ORTHO05D009669 5.4e-100 369.0 263 79.8
Medtr8g005870 Medicago truncatula HOM05D007700 ORTHO05D009669 5.0e-90 335.9 274 73.4
TPR.G28737 Trifolium pratense HOM05D007700 ORTHO05D009669 9.5e-89 331.6 266 73.3
Lj3g0022870 Lotus japonicus HOM05D007700 ORTHO05D009669 3.1e-87 326.6 266 65.4
arahy.Tifrunner.gnm1.ann1.PXC5PH Arachis hypogaea HOM05D007700 ORTHO05D009669 3.4e-86 323.2 271 63.8
arahy.Tifrunner.gnm1.ann1.HE2L98 Arachis hypogaea HOM05D007700 ORTHO05D009669 6.2e-80 302.4 271 61.3
CANSAT25G3310 Cannabis sativa HOM05D007700 ORTHO05D009669 7.3e-73 278.9 269 55.4
Thecc.01G008500 Theobroma cacao HOM05D007700 ORTHO05D009669 1.1e-71 275.0 260 56.9
Cfa007052 Carpinus fangiana HOM05D007700 ORTHO05D009669 1.2e-70 271.6 276 58.3
Haze_03682 Corylus avellana HOM05D006745 ORTHO05D008449 9.9e-70 268.5 272 58.8
CiPaw.07G004600 Carya illinoinensis HOM05D007700 ORTHO05D009669 4.9e-69 266.2 268 58.6
Glyma.07G109000 Glycine max HOM05D007700 ORTHO05D009669 4.2e-68 263.1 267 56.6
Gorai.003G004000 Gossypium raimondii HOM05D007700 ORTHO05D009669 2.7e-67 260.4 261 57.9
Gohir.D03G003800 Gossypium hirsutum HOM05D007700 ORTHO05D009669 1.9e-65 254.2 259 55.6
VMungo0331G0753 Vigna mungo HOM05D007700 ORTHO05D009669 3.3e-65 253.4 270 55.2
Eucgr.I02272 Eucalyptus grandis HOM05D007700 ORTHO05D009669 9.6e-65 251.9 274 52.2
QL06p052538 Quercus lobata HOM05D007700 ORTHO05D009669 2.1e-64 250.8 268 50.7
Manes.01G153300 Manihot esculenta HOM05D007700 ORTHO05D009669 4.0e-63 246.5 269 57.6
Potri.005G103300 Populus trichocarpa HOM05D007700 ORTHO05D009669 6.9e-63 245.7 263 51.0
Dinv40165 Davidia involucrata HOM05D007700 ORTHO05D009669 2.6e-62 243.8 275 55.3
CsaV3_6G047710 Cucumis sativus L. HOM05D007700 ORTHO05D009669 9.9e-62 241.9 264 56.1
Actinidia22918 Actinidia chinensis HOM05D007700 ORTHO05D009669 1.3e-61 241.5 271 50.6
Sabra05G0085500 Salix brachista HOM05D007700 ORTHO05D009669 1.1e-60 238.4 267 50.2
ClCG01G020760 Citrullus lanatus HOM05D007700 ORTHO05D009669 2.4e-60 237.3 264 50.8
Sopen02g027760 Solanum pennellii HOM05D007700 ORTHO05D009669 5.4e-60 236.1 268 48.5
PGSC0003DMG400040241 Solanum tuberosum HOM05D007700 ORTHO05D009669 5.4e-60 236.1 268 48.5
THA.LOC104804288 Tarenaya hassleriana HOM05D007700 ORTHO05D009669 2.1e-59 234.2 266 51.9
MELO3C007960.2 Cucumis melo HOM05D007700 ORTHO05D009669 4.6e-59 233.0 269 50.2
Solyc02g082970.1 Solanum lycopersicum HOM05D007700 ORTHO05D009669 6.0e-59 232.6 270 52.6
Nn6g31772 Nelumbo nucifera HOM05D007700 ORTHO05D009669 7.9e-59 232.3 277 49.1
PGR119G0746 Punica granatum HOM05D007700 ORTHO05D009669 1.0e-58 231.9 268 54.5
AT2G17670 Arabidopsis thaliana HOM05D007700 ORTHO05D009669 3.0e-58 230.3 265 46.8
Lj2P490T20 Lonicera japonica HOM05D007700 ORTHO05D009669 1.9e-57 227.6 265 51.3
TAR625G0909 Trochodendron aralioides HOM05D007700 ORTHO05D009669 1.9e-57 227.6 277 52.3
Atru.chr3.942 Acer truncatum HOM05D007700 ORTHO05D009669 2.5e-57 227.3 271 46.9
Thhalv10022683m.g Eutrema salsugineum HOM05D007700 ORTHO05D009669 9.6e-57 225.3 264 47.0
AL3G50640 Arabidopsis lyrata HOM05D007700 ORTHO05D009669 2.1e-56 224.2 265 45.7
Aa31LG8G14930 Aethionema arabicum HOM05D007700 ORTHO05D009669 3.6e-56 223.4 263 45.6
Sed0015131 Sechium edule HOM05D000242 ORTHO05D009669 8.1e-56 222.2 244 50.0
Cc00_g14260 Coffea canephora HOM05D007700 ORTHO05D009669 1.5e-54 218.0 267 47.6
Rhsim10G0201800 Rhododendron simsii HOM05D000242 ORTHO05D009669 1.5e-54 218.0 206 52.4
Rhsim10G0203000 Rhododendron simsii HOM05D000242 ORTHO05D009669 2.6e-54 217.2 207 52.2
Sp3g31020 Schrenkiella parvula HOM05D007700 ORTHO05D009669 4.5e-54 216.5 263 46.0
vmacro20514 Vaccinium macrocarpon HOM05D007700 ORTHO05D009669 4.5e-54 216.5 206 54.4
BolC9t54240H Brassica oleracea HOM05D007700 ORTHO05D009669 1.4e-52 211.5 262 45.0
C09p13500 Brassica napus HOM05D007700 ORTHO05D009669 3.2e-52 210.3 262 44.7
BraA09t36788Z Brassica rapa HOM05D007700 ORTHO05D009669 7.9e-51 205.7 262 42.7
Carub.0003s3177 Capsella rubella HOM05D007700 ORTHO05D009669 2.3e-50 204.1 231 45.5
Phvul.010G056500 Phaseolus vulgaris HOM05D007700 ORTHO05D009669 2.3e-50 204.1 270 47.0
Ciclev10025555m.g Citrus clementina HOM05D007700 ORTHO05D009669 3.0e-50 203.8 262 42.7
BcaB07g31715 Brassica carinata HOM05D007700 ORTHO05D009669 5.1e-50 203.0 267 41.6
A09p11480 Brassica napus HOM05D007700 ORTHO05D009669 7.4e-49 199.1 265 41.9
COL.COLO4_22522 Corchorus olitorius HOM05D007700 ORTHO05D009669 9.6e-49 198.7 217 52.1
Lalb_Chr03g0039951 Lupinus albus HOM05D007700 ORTHO05D009669 1.3e-48 198.4 197 57.9
Prupe.7G178400 Prunus persica HOM05D007700 ORTHO05D009669 4.0e-47 193.4 269 43.5
DCAR_023138 Daucus carota HOM05D007700 ORTHO05D009669 2.1e-43 181.0 176 54.5
HanXRQChr07g0192051 Helianthus annuus HOM05D007700 ORTHO05D009669 2.7e-43 180.6 274 43.4
SGA_v2.0_scaffold275G46573 Striga asiatica HOM05D007700 ORTHO05D009669 1.3e-42 178.3 238 45.4
Gohir.A02G176100 Gossypium hirsutum HOM05D007700 ORTHO05D009669 2.3e-42 177.6 148 64.2
Peaxi162Scf01310g10029 Petunia axillaris HOM05D007700 ORTHO05D009669 2.3e-42 177.6 265 46.0
MBI05_g43154_MAGBIO Magnolia biondii HOM05D007700 ORTHO05D009669 3.0e-42 177.2 263 42.6
Lsat_1_v5_gn_2_74520 Lactuca sativa HOM05D007700 ORTHO05D009669 1.1e-41 175.3 279 46.6
Migut.C00922 Erythranthe guttata HOM05D007700 ORTHO05D009669 1.9e-41 174.5 244 44.3
CARHR107900 Cardamine hirsuta HOM05D007700 ORTHO05D009669 3.3e-41 173.7 223 46.2
Dinv08534 Davidia involucrata HOM05D007700 ORTHO05D009669 1.4e-39 168.3 152 55.9
FvH4_1g10671 Fragaria vesca HOM05D007700 ORTHO05D009669 1.8e-39 167.9 189 50.8
MD02G1120600 Malus domestica HOM05D007700 ORTHO05D009669 1.8e-39 167.9 268 38.8
FAN23G0395 Fragaria x ananassa HOM05D007700 ORTHO05D009669 4.1e-39 166.8 189 50.3
Nitab4.5_0003207g0040 Nicotiana tabacum HOM05D007700 ORTHO05D009669 2.6e-38 164.1 152 61.8
SalBow7G3569 Salvia bowleyana HOM05D007700 ORTHO05D009669 3.4e-38 163.7 241 42.3
Nitab4.5_0001581g0090 Nicotiana tabacum HOM05D007700 ORTHO05D009669 4.5e-38 163.3 152 61.2
CAN.G890.59 Capsicum annuum HOM05D007700 ORTHO05D009669 1.3e-37 161.8 151 61.6
CDE05G1147 Ceratophyllum demersum HOM05D007700 ORTHO05D009669 1.1e-36 158.7 235 41.3
TWI73G0108 Tripterygium wilfordii HOM05D007700 ORTHO05D009669 1.1e-36 158.7 201 46.8
Aqoxy6G01792 Aquilegia oxysepala HOM05D007700 ORTHO05D009669 1.3e-34 151.8 213 43.7
EL10Ac6g13369 Beta vulgaris HOM05D007700 ORTHO05D009669 5.1e-34 149.8 213 44.6
HPP92_025432 Vanilla planifolia HOM05D007700 ORTHO05D009669 1.5e-33 148.3 278 38.8
AUR62041102 Chenopodium quinoa HOM05D007700 ORTHO05D009669 2.8e-32 144.1 195 45.1
AUR62026170 Chenopodium quinoa HOM05D007700 ORTHO05D009669 1.5e-30 138.3 193 43.0
MSTRG.1126 Avicennia marina HOM05D007700 ORTHO05D009669 2.2e-29 134.4 228 41.7
Ah.03g134060 Amaranthus hybridus HOM05D007700 ORTHO05D009669 6.1e-27 126.3 198 38.4
Sc03g0003890 Simmondsia chinensis HOM05D007700 ORTHO05D009669 7.9e-27 125.9 189 39.7
Actinidia17391 Actinidia chinensis HOM05D000192 ORTHO05D000123 5.1e-26 123.2 150 45.3
SHI08474 Sapria himalayana HOM05D007700 ORTHO05D009669 5.1e-26 123.2 105 53.3
Glyma.03G117900 Glycine max HOM05D007700 ORTHO05D009669 1.5e-25 121.7 269 39.0
BcaC04g22956 Brassica carinata HOM05D007700 ORTHO05D009669 7.2e-20 102.8 112 43.8
ATR0661G421 Amborella trichopoda HOM05D007700 ORTHO05D009669 8.2e-16 89.4 123 44.7
ATR0739G057 Amborella trichopoda HOM05D007700 ORTHO05D009669 1.8e-15 88.2 238 31.1
CDE05G1645 Ceratophyllum demersum HOM05D007700 ORTHO05D009669 2.0e-09 68.2 81 40.7
CSS0049050 Camellia sinensis var. sinensis HOM05D007700 ORTHO05D009669 1.1e-07 62.4 35 82.9
ECA238G1378 Erigeron canadensis HOM05D007700 ORTHO05D009669 1.1e-07 62.4 35 80.0
Sp3g31030 Schrenkiella parvula HOM05D007700 ORTHO05D009669 1.4e-07 62.0 35 80.0
Dinv21881 Davidia involucrata HOM05D000104 ORTHO05D009920 9.1e-07 59.3 144 29.9
EL10Ac7g17850 Beta vulgaris HOM05D001779 ORTHO05D001753 7.7e-06 56.2 110 30.9


User provided reference genes

Program Settings