Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_23107_v3 Cicer arietinum L. HOM05D007303 ORTHO05D009231 2.2e-31 138.3 66 100.0
Medtr8g005360 Medicago truncatula HOM05D007303 ORTHO05D009231 7.7e-29 129.8 64 92.2
Psat6g005160 Pisum sativum HOM05D007303 ORTHO05D009231 3.8e-28 127.5 61 96.7
TWI74G1491 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 1.1e-27 125.9 66 90.9
Prupe.6G297800 Prunus persica HOM05D007303 ORTHO05D009231 5.5e-27 123.6 65 84.6
Glyma.09G271600 Glycine max HOM05D007303 ORTHO05D009231 2.1e-26 121.7 64 85.9
RcHm_v2.0_Chr3g0459881 Rosa chinensis HOM05D007303 ORTHO05D009231 2.1e-26 121.7 65 83.1
FvH4_6g09420 Fragaria vesca HOM05D007303 ORTHO05D009231 2.7e-26 121.3 65 83.1
FAN14G3833 Fragaria x ananassa HOM05D007303 ORTHO05D009231 2.7e-26 121.3 65 83.1
Glyma.18G217700 Glycine max HOM05D007303 ORTHO05D009231 2.7e-26 121.3 64 84.4
CANSAT83G0001 Cannabis sativa HOM05D007303 ORTHO05D009231 4.7e-26 120.6 63 88.9
Cfa017000 Carpinus fangiana HOM05D007303 ORTHO05D009231 4.7e-26 120.6 66 84.8
CsaV3_4G027390 Cucumis sativus L. HOM05D007303 ORTHO05D009231 4.7e-26 120.6 61 90.2
MD04G1177900 Malus domestica HOM05D007303 ORTHO05D009231 4.7e-26 120.6 62 88.7
MD12G1193500 Malus domestica HOM05D007303 ORTHO05D009231 4.7e-26 120.6 62 88.7
Sed0004919 Sechium edule HOM05D007303 ORTHO05D009231 4.7e-26 120.6 64 85.9
FAN05G5278 Fragaria x ananassa HOM05D007303 ORTHO05D009231 8.0e-26 119.8 65 81.5
FAN09G2915 Fragaria x ananassa HOM05D007303 ORTHO05D009231 8.0e-26 119.8 65 81.5
Haze_21228 Corylus avellana HOM05D007303 ORTHO05D009231 1.4e-25 119.0 66 84.8
MELO3C025258.2 Cucumis melo HOM05D007303 ORTHO05D009231 1.4e-25 119.0 61 88.5
Hma1.2p1_0174F.1_g076630 Hydrangea macrophylla HOM05D007303 ORTHO05D009231 1.4e-25 119.0 65 83.1
TWI53G0471 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 1.4e-25 119.0 66 84.8
Cpa.g.sc0.70 Carica papaya HOM05D007303 ORTHO05D009231 1.8e-25 118.6 66 84.8
Phvul.008G079100 Phaseolus vulgaris HOM05D007303 ORTHO05D009231 1.8e-25 118.6 64 84.4
GSVIVG01010904001 Vitis vinifera HOM05D007303 ORTHO05D009231 1.8e-25 118.6 60 88.3
Duzib151G0876 Durio zibethinus HOM05D007303 ORTHO05D009231 2.3e-25 118.2 65 84.6
PGR031G1377 Punica granatum HOM05D007303 ORTHO05D009231 2.3e-25 118.2 65 81.5
CiPaw.10G166700 Carya illinoinensis HOM05D007303 ORTHO05D009231 3.0e-25 117.9 65 81.5
ClCG04G006170 Citrullus lanatus HOM05D007303 ORTHO05D009231 4.0e-25 117.5 65 81.5
arahy.Tifrunner.gnm1.ann1.RL3GXR Arachis hypogaea HOM05D007303 ORTHO05D009231 5.2e-25 117.1 66 81.8
arahy.Tifrunner.gnm1.ann1.ZQ7RI8 Arachis hypogaea HOM05D007303 ORTHO05D009231 5.2e-25 117.1 66 81.8
Migut.L02050 Erythranthe guttata HOM05D007303 ORTHO05D009231 5.2e-25 117.1 64 82.8
Manes.09G121600 Manihot esculenta HOM05D007303 ORTHO05D009231 5.2e-25 117.1 64 84.4
TAR633G2342 Trochodendron aralioides HOM05D007303 ORTHO05D009231 6.8e-25 116.7 62 88.7
Eucgr.K01299 Eucalyptus grandis HOM05D007303 ORTHO05D009231 1.2e-24 115.9 59 89.8
Sopen10g027350 Solanum pennellii HOM05D007303 ORTHO05D009231 1.2e-24 115.9 65 78.5
PGSC0003DMG400027701 Solanum tuberosum HOM05D007303 ORTHO05D009231 1.2e-24 115.9 65 78.5
CAN.G65.102 Capsicum annuum HOM05D007303 ORTHO05D009231 1.5e-24 115.5 65 75.4
COL.COLO4_05680 Corchorus olitorius HOM05D007303 ORTHO05D009231 2.0e-24 115.2 65 81.5
Nitab4.5_0001215g0100 Nicotiana tabacum HOM05D007303 ORTHO05D009231 2.0e-24 115.2 65 78.5
Oeu026929.1 Olea europaea HOM05D007303 ORTHO05D009231 2.0e-24 115.2 64 82.8
Ah.15g089810 Amaranthus hybridus HOM05D007303 ORTHO05D009231 3.4e-24 114.4 65 81.5
Oeu035181.1 Olea europaea HOM05D007303 ORTHO05D009231 3.4e-24 114.4 66 80.3
Hund19736 Selenicereus undatus HOM05D007303 ORTHO05D009231 3.4e-24 114.4 62 82.3
Lj3g0023771 Lotus japonicus HOM05D007303 ORTHO05D009231 4.4e-24 114.0 64 84.4
Os05g0481600 Oryza sativa ssp. japonica HOM05D007303 ORTHO05D009231 4.4e-24 114.0 64 79.7
Oeu007820.2 Olea europaea HOM05D007303 ORTHO05D009231 5.7e-24 113.6 64 81.2
Thecc.04G147800 Theobroma cacao HOM05D007303 ORTHO05D009231 5.7e-24 113.6 65 80.0
C05p59250 Brassica napus HOM05D007303 ORTHO05D009231 7.5e-24 113.2 66 78.8
BolC5t34572H Brassica oleracea HOM05D007303 ORTHO05D009231 7.5e-24 113.2 66 78.8
AUR62006451 Chenopodium quinoa HOM05D007303 ORTHO05D009231 9.8e-24 112.8 65 78.5
Sc20g0007240 Simmondsia chinensis HOM05D007303 ORTHO05D009231 9.8e-24 112.8 63 81.0
AT3G08610 Arabidopsis thaliana HOM05D007303 ORTHO05D009231 1.3e-23 112.5 66 77.3
SalBow4G1964 Salvia bowleyana HOM05D007303 ORTHO05D009231 1.3e-23 112.5 71 78.9
SalBow4G2888 Salvia bowleyana HOM05D007303 ORTHO05D009231 1.3e-23 112.5 71 78.9
AL3G19590 Arabidopsis lyrata HOM05D007303 ORTHO05D009231 1.7e-23 112.1 66 77.3
BcaB04g18583 Brassica carinata HOM05D007303 ORTHO05D009231 1.7e-23 112.1 66 77.3
BcaC05g29598 Brassica carinata HOM05D007303 ORTHO05D009231 1.7e-23 112.1 66 77.3
A05p40170 Brassica napus HOM05D007303 ORTHO05D009231 1.7e-23 112.1 66 77.3
Thhalv10021979m.g Eutrema salsugineum HOM05D007303 ORTHO05D009231 1.7e-23 112.1 66 77.3
Gohir.A10G152200 Gossypium hirsutum HOM05D007303 ORTHO05D009231 2.2e-23 111.7 63 81.0
Gohir.A10G152700 Gossypium hirsutum HOM05D007303 ORTHO05D009231 2.2e-23 111.7 63 81.0
Gohir.D10G113500 Gossypium hirsutum HOM05D007303 ORTHO05D009231 2.2e-23 111.7 63 81.0
Gohir.D10G114000 Gossypium hirsutum HOM05D007303 ORTHO05D009231 2.2e-23 111.7 63 81.0
Gorai.011G125300 Gossypium raimondii HOM05D007303 ORTHO05D009231 2.2e-23 111.7 63 81.0
Gorai.011G125800 Gossypium raimondii HOM05D007303 ORTHO05D009231 2.2e-23 111.7 63 81.0
THA.LOC104816152 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 2.2e-23 111.7 61 82.0
Aa31LG5G11350 Aethionema arabicum HOM05D007303 ORTHO05D009231 3.7e-23 110.9 62 79.0
BcaC09g47979 Brassica carinata HOM05D007303 ORTHO05D009231 3.7e-23 110.9 66 75.8
BolC1t05499H Brassica oleracea HOM05D007303 ORTHO05D009231 3.7e-23 110.9 66 75.8
BraA01t04340Z Brassica rapa HOM05D007303 ORTHO05D009231 3.7e-23 110.9 66 75.8
CARHR082910 Cardamine hirsuta HOM05D007303 ORTHO05D009231 3.7e-23 110.9 66 75.8
BraA03t12812Z Brassica rapa HOM05D007303 ORTHO05D009231 4.8e-23 110.5 66 75.8
Lsat_1_v5_gn_8_109701 Lactuca sativa HOM05D007303 ORTHO05D009231 4.8e-23 110.5 63 82.5
BcaC01g04187 Brassica carinata HOM05D007303 ORTHO05D009231 6.3e-23 110.2 62 79.0
BolC3t16676H Brassica oleracea HOM05D007303 ORTHO05D009231 6.3e-23 110.2 62 79.0
PSO384G4262 Papaver somniferum HOM05D007303 ORTHO05D009231 6.3e-23 110.2 64 78.1
Cc06_g00200 Coffea canephora HOM05D007303 ORTHO05D009231 1.1e-22 109.4 59 84.7
BcaB04g21249 Brassica carinata HOM05D007303 ORTHO05D009231 1.4e-22 109.0 63 76.2
Carub.0003s0774 Capsella rubella HOM05D007303 ORTHO05D009231 2.4e-22 108.2 66 72.7
Aa31LG5G18650 Aethionema arabicum HOM05D007303 ORTHO05D009231 5.4e-22 107.1 62 75.8
THA.LOC104820511 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 7.0e-22 106.7 61 80.3
Duzib212G0558 Durio zibethinus HOM05D007303 ORTHO05D009231 2.0e-21 105.1 61 78.7
DCAR_023961 Daucus carota HOM05D007303 ORTHO05D009231 2.7e-21 104.8 52 90.4
Potri.016G140900 Populus trichocarpa HOM05D007303 ORTHO05D009231 5.9e-21 103.6 63 71.4
Sp3g07060 Schrenkiella parvula HOM05D007303 ORTHO05D009231 7.7e-21 103.2 55 83.6
ECA236G3381 Erigeron canadensis HOM05D007303 ORTHO05D009231 2.3e-20 101.7 55 81.8
Oeu028466.1 Olea europaea HOM05D007303 ORTHO05D009231 5.5e-19 97.1 63 69.8
SEGI_21984 Sequoiadendron giganteum HOM05D007303 ORTHO05D009231 8.0e-18 93.2 58 70.7
QL07p031324 Quercus lobata HOM05D007303 ORTHO05D009231 1.8e-17 92.0 65 61.5
CiPaw.01G273900 Carya illinoinensis HOM05D007303 ORTHO05D009231 2.8e-15 84.7 55 70.9
Cc00_g04100 Coffea canephora HOM05D007303 ORTHO05D009231 4.9e-15 84.0 64 67.2
Cc09_g07100 Coffea canephora HOM05D007303 ORTHO05D009231 1.1e-14 82.8 64 64.1
Manes.08G168000 Manihot esculenta HOM05D007303 ORTHO05D009231 5.4e-14 80.5 44 81.8
Sabra04G0157400 Salix brachista HOM05D007303 ORTHO05D009231 1.3e-12 75.9 47 70.2
MBI15_g31036_MAGBIO Magnolia biondii HOM05D007303 ORTHO05D009231 2.3e-12 75.1 38 89.5
Zm00001eb290920 Zea mays HOM05D007303 ORTHO05D009231 8.6e-12 73.2 38 81.6
CSS0019093 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 4.3e-11 70.9 36 86.1
CSS0017493 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 5.6e-11 70.5 36 86.1
CSS0048723 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 5.6e-11 70.5 36 86.1
Mapoly0148s0030 Marchantia polymorpha HOM05D007303 ORTHO05D009231 3.6e-10 67.8 62 46.8
A03p36440 Brassica napus HOM05D007303 ORTHO05D009231 1.0e-09 66.2 36 80.6
Pp3c10_5690 Physcomitrium patens HOM05D007303 ORTHO05D009231 4.0e-09 64.3 53 49.1
Pp3c10_5720 Physcomitrium patens HOM05D007303 ORTHO05D009231 4.0e-09 64.3 53 49.1
CBR_g5630 Chara braunii HOM05D007303 ORTHO05D009231 1.5e-08 62.4 55 49.1
Cc07_g13470 Coffea canephora HOM05D007303 ORTHO05D009231 2.0e-08 62.0 42 61.9


User provided reference genes

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