Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_23036_v3 Cicer arietinum L. HOM05D005607 ORTHO05D008142 5.3e-290 1000.3 524 100.0
Medtr8g058790 Medicago truncatula HOM05D005607 ORTHO05D008142 8.8e-261 903.3 527 90.5
Medtr8g061280 Medicago truncatula HOM05D005607 ORTHO05D008142 8.8e-261 903.3 527 90.5
TPR.G28174 Trifolium pratense HOM05D005607 ORTHO05D008142 1.1e-258 896.3 525 89.9
Glyma.06G236100 Glycine max HOM05D005607 ORTHO05D008142 7.3e-239 830.5 526 82.7
Lj3g0025006 Lotus japonicus HOM05D005607 ORTHO05D008142 7.3e-239 830.5 524 83.4
Lalb_Chr19g0134061 Lupinus albus HOM05D005607 ORTHO05D008142 8.9e-229 797.0 525 80.2
arahy.Tifrunner.gnm1.ann1.K8QLTQ Arachis hypogaea HOM05D005607 ORTHO05D008142 6.0e-225 784.3 524 79.0
arahy.Tifrunner.gnm1.ann1.3D346W Arachis hypogaea HOM05D005607 ORTHO05D008142 8.1e-222 773.9 524 77.9
VMungo1127G0827 Vigna mungo HOM05D005607 ORTHO05D008142 2.1e-206 722.6 522 73.9
Psat7g207160 Pisum sativum HOM05D005607 ORTHO05D008142 4.8e-198 694.9 423 87.5
GSVIVG01014288001 Vitis vinifera HOM05D005607 ORTHO05D008142 3.1e-197 692.2 524 69.7
CSS0008326 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 9.6e-191 670.6 518 67.6
MD03G1232700 Malus domestica HOM05D005607 ORTHO05D008142 1.3e-190 670.2 524 67.7
TWI38G0301 Tripterygium wilfordii HOM05D005607 ORTHO05D008142 4.8e-190 668.3 524 66.4
Ciclev10007885m.g Citrus clementina HOM05D005607 ORTHO05D008142 6.3e-190 667.9 524 67.2
Prupe.4G175900 Prunus persica HOM05D005607 ORTHO05D008142 4.5e-188 661.8 524 67.2
COL.COLO4_36717 Corchorus olitorius HOM05D005607 ORTHO05D008142 7.6e-188 661.0 524 66.0
Eucgr.F01169 Eucalyptus grandis HOM05D005607 ORTHO05D008142 2.9e-187 659.1 524 66.0
CiPaw.11G167700 Carya illinoinensis HOM05D005607 ORTHO05D008142 3.8e-187 658.7 524 66.2
MELO3C025610.2 Cucumis melo HOM05D005607 ORTHO05D008142 3.2e-186 655.6 524 64.9
Potri.001G396500 Populus trichocarpa HOM05D005607 ORTHO05D008142 5.5e-186 654.8 527 66.6
RcHm_v2.0_Chr5g0032701 Rosa chinensis HOM05D005607 ORTHO05D008142 1.2e-185 653.7 524 66.6
Thecc.07G096400 Theobroma cacao HOM05D005607 ORTHO05D008142 2.7e-185 652.5 524 65.6
PGR083G1887 Punica granatum HOM05D005607 ORTHO05D008142 4.6e-185 651.7 520 65.4
Sed0013999 Sechium edule HOM05D005607 ORTHO05D008142 6.1e-185 651.4 524 64.3
CsaV3_4G033450 Cucumis sativus L. HOM05D005607 ORTHO05D008142 2.3e-184 649.4 524 64.5
Cfa020607 Carpinus fangiana HOM05D005607 ORTHO05D008142 5.1e-184 648.3 524 65.3
Dinv20204 Davidia involucrata HOM05D005607 ORTHO05D008142 6.7e-184 647.9 520 66.0
Manes.03G105800 Manihot esculenta HOM05D005607 ORTHO05D008142 1.5e-183 646.7 524 64.9
Gohir.D05G347700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 2.5e-183 646.0 524 65.8
Gohir.A04G035700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 7.4e-183 644.4 524 65.3
Gorai.009G375500 Gossypium raimondii HOM05D005607 ORTHO05D008142 7.4e-183 644.4 524 65.8
Sabra16G0259600 Salix brachista HOM05D005607 ORTHO05D008142 7.4e-183 644.4 527 66.2
Cc05_g11730 Coffea canephora HOM05D005607 ORTHO05D008142 2.4e-181 639.4 518 65.3
Rhsim06G0202700 Rhododendron simsii HOM05D005607 ORTHO05D008142 2.4e-181 639.4 534 63.5
FvH4_3g19420 Fragaria vesca HOM05D005607 ORTHO05D008142 3.1e-181 639.0 524 65.3
ClCG11G017810 Citrullus lanatus HOM05D005607 ORTHO05D008142 4.1e-181 638.6 538 63.4
Sopen07g031060 Solanum pennellii HOM05D005607 ORTHO05D008142 6.9e-181 637.9 520 65.0
Nitab4.5_0002330g0110 Nicotiana tabacum HOM05D005607 ORTHO05D008142 1.5e-180 636.7 520 64.6
Cpa.g.sc131.86 Carica papaya HOM05D005607 ORTHO05D008142 2.0e-180 636.3 524 63.4
Nitab4.5_0008275g0010 Nicotiana tabacum HOM05D005607 ORTHO05D008142 2.6e-180 636.0 520 64.2
vmacro11890 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 5.0e-179 631.7 544 62.5
vmacro23190 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 6.5e-179 631.3 544 62.5
CAN.G162.36 Capsicum annuum HOM05D005607 ORTHO05D008142 2.1e-177 626.3 520 63.5
Nn1g04204 Nelumbo nucifera HOM05D005607 ORTHO05D008142 1.8e-176 623.2 524 63.2
Phvul.011G160300 Phaseolus vulgaris HOM05D005607 ORTHO05D008142 3.0e-176 622.5 451 74.1
Duzib213G0871 Durio zibethinus HOM05D005607 ORTHO05D008142 8.8e-176 620.9 518 64.3
MSTRG.12893 Avicennia marina HOM05D005607 ORTHO05D008142 1.1e-175 620.5 520 63.1
Sc16g0007180 Simmondsia chinensis HOM05D005607 ORTHO05D008142 2.0e-175 619.8 519 62.8
FAN16G0865 Fragaria x ananassa HOM05D005607 ORTHO05D008142 3.1e-173 612.5 538 62.5
CSS0003695 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 4.1e-173 612.1 530 62.8
CANSAT35G0745 Cannabis sativa HOM05D005607 ORTHO05D008142 1.0e-171 607.4 524 61.3
Oeu005401.4 Olea europaea HOM05D005607 ORTHO05D008142 7.2e-170 601.3 636 54.2
DCAR_017123 Daucus carota HOM05D005607 ORTHO05D008142 1.0e-168 597.4 556 59.4
Atru.chr2.2407 Acer truncatum HOM05D005607 ORTHO05D008142 5.2e-168 595.1 524 61.1
HanXRQChr15g0495421 Helianthus annuus HOM05D005607 ORTHO05D008142 5.2e-168 595.1 521 60.7
ECA236G2999 Erigeron canadensis HOM05D005607 ORTHO05D008142 1.3e-166 590.5 521 60.5
Actinidia31524 Actinidia chinensis HOM05D005607 ORTHO05D008142 2.2e-166 589.7 524 60.3
Eucgr.F01141 Eucalyptus grandis HOM05D005607 ORTHO05D008142 4.8e-166 588.6 524 60.7
Lsat_1_v5_gn_7_104480 Lactuca sativa HOM05D005607 ORTHO05D008142 1.8e-165 586.6 522 60.9
MD11G1253400 Malus domestica HOM05D005607 ORTHO05D008142 2.0e-164 583.2 463 67.6
PSO832G0774 Papaver somniferum HOM05D005607 ORTHO05D008142 2.0e-164 583.2 524 59.5
PSO210G5410 Papaver somniferum HOM05D005607 ORTHO05D008142 3.5e-164 582.4 524 59.7
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 7.7e-164 581.3 568 57.4
THA.LOC104815562 Tarenaya hassleriana HOM05D005607 ORTHO05D008142 3.8e-163 578.9 524 59.0
Eucgr.F00890 Eucalyptus grandis HOM05D005607 ORTHO05D008142 2.4e-157 559.7 524 58.6
AT3G15180 Arabidopsis thaliana HOM05D005607 ORTHO05D008142 4.5e-156 555.4 524 56.3
AL3G27570 Arabidopsis lyrata HOM05D005607 ORTHO05D008142 2.9e-155 552.7 524 56.5
Thhalv10020515m.g Eutrema salsugineum HOM05D005607 ORTHO05D008142 1.1e-154 550.8 524 55.7
Sp3g13390 Schrenkiella parvula HOM05D005607 ORTHO05D008142 4.2e-154 548.9 524 56.7
Ah.06g184600 Amaranthus hybridus HOM05D005607 ORTHO05D008142 7.2e-154 548.1 521 57.8
Carub.0003s1483 Capsella rubella HOM05D005607 ORTHO05D008142 1.2e-153 547.4 524 55.9
EL10Ac4g08241 Beta vulgaris HOM05D005607 ORTHO05D008142 6.1e-153 545.0 514 59.1
SGA_v2.0_scaffold130G34350 Striga asiatica HOM05D005607 ORTHO05D008142 4.0e-152 542.3 568 54.0
BraA05t22250Z Brassica rapa HOM05D005607 ORTHO05D008142 1.7e-150 537.0 524 54.6
ATR0737G117 Amborella trichopoda HOM05D005607 ORTHO05D008142 2.0e-148 530.0 518 54.1
CDE10G0361 Ceratophyllum demersum HOM05D005607 ORTHO05D008142 2.7e-148 529.6 520 56.3
C05p52050 Brassica napus HOM05D005607 ORTHO05D008142 2.5e-146 523.1 550 52.2
A05p34290 Brassica napus HOM05D005607 ORTHO05D008142 5.5e-146 521.9 551 51.9
BolC5t33890H Brassica oleracea HOM05D005607 ORTHO05D008142 9.5e-146 521.2 538 53.0
Aa31LG8G2380 Aethionema arabicum HOM05D005607 ORTHO05D008142 2.1e-145 520.0 535 53.8
Aqoxy4G00691 Aquilegia oxysepala HOM05D005607 ORTHO05D008142 3.0e-144 516.2 468 59.0
Duzib170G0139 Durio zibethinus HOM05D005607 ORTHO05D008142 8.8e-144 514.6 524 55.3
BcaB06g29542 Brassica carinata HOM05D005607 ORTHO05D008142 9.2e-141 504.6 524 53.2
Os05g0557200 Oryza sativa ssp. japonica HOM05D005607 ORTHO05D008142 2.7e-140 503.1 519 51.6
Migut.H01958 Erythranthe guttata HOM05D005607 ORTHO05D008142 1.3e-139 500.7 450 59.3
Zm00001eb295460 Zea mays HOM05D005607 ORTHO05D008142 2.8e-137 493.0 519 50.1
Lj1A839T37 Lonicera japonica HOM05D005607 ORTHO05D008142 1.3e-126 457.6 392 62.0
Hund02235 Selenicereus undatus HOM05D005607 ORTHO05D008142 8.1e-121 438.3 395 60.5
Lj1A839T35 Lonicera japonica HOM05D005607 ORTHO05D008142 1.1e-112 411.4 410 55.6
AUR62036159 Chenopodium quinoa HOM05D005607 ORTHO05D008142 1.4e-109 401.0 522 47.3
AUR62019473 Chenopodium quinoa HOM05D005607 ORTHO05D008142 3.2e-109 399.8 552 45.7
Peaxi162Scf00069g01839 Petunia axillaris HOM05D005607 ORTHO05D008142 2.4e-104 383.6 320 64.4
Solyc07g062860.3 Solanum lycopersicum HOM05D005607 ORTHO05D008142 9.9e-103 378.3 337 61.1
SalBow7G3213 Salvia bowleyana HOM05D005607 ORTHO05D008142 8.4e-94 348.6 293 62.1
SalBow7G3521 Salvia bowleyana HOM05D005607 ORTHO05D008142 8.4e-94 348.6 293 62.1
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 1.8e-88 330.9 381 50.1
AagrBONN_evm.TU.Sc2ySwM_344.1287 Anthoceros agrestis HOM05D005607 ORTHO05D008142 1.5e-87 327.8 518 39.2
Pp3c1_12630 Physcomitrium patens HOM05D005607 ORTHO05D008142 7.6e-79 298.9 526 35.7
MBI06_g04182_MAGBIO Magnolia biondii HOM05D005607 ORTHO05D008142 2.2e-73 280.8 373 46.9
QL08p023973 Quercus lobata HOM05D005607 ORTHO05D008142 2.6e-71 273.9 201 69.2
QL08p023962 Quercus lobata HOM05D005607 ORTHO05D008142 1.3e-70 271.6 236 62.7
Glyma.12G162201 Glycine max HOM05D005607 ORTHO05D008142 3.8e-70 270.0 175 79.4
SMO139G0024 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 1.2e-68 265.0 527 33.8
FAN11G3919 Fragaria x ananassa HOM05D005607 ORTHO05D008142 2.2e-65 254.2 264 54.9
MD11G1279000 Malus domestica HOM05D005607 ORTHO05D008142 5.1e-59 233.0 292 51.4
PGSC0003DMG400012404 Solanum tuberosum HOM05D005607 ORTHO05D008142 4.1e-56 223.4 174 65.5
Peaxi162Scf00069g01838 Petunia axillaris HOM05D005607 ORTHO05D008142 1.7e-54 218.0 163 65.6
CARHR090160 Cardamine hirsuta HOM05D005607 ORTHO05D008142 2.0e-50 204.5 229 48.0
SMO145G0057 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 8.5e-46 189.1 493 29.8
CBR_g2884 Chara braunii HOM05D005607 ORTHO05D008142 1.4e-40 171.8 293 39.9
QL08p023949 Quercus lobata HOM05D005607 ORTHO05D008142 2.4e-32 144.4 100 70.0
FAN25G1444 Fragaria x ananassa HOM05D005607 ORTHO05D008142 2.9e-30 137.5 107 62.6
SEGI_34734 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 5.0e-30 136.7 126 54.8
SEGI_17376 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 7.3e-21 106.3 135 40.7
EL10Ac6g14983 Beta vulgaris HOM05D005607 ORTHO05D008142 2.3e-19 101.3 101 53.5
MELO3C033904.2 Cucumis melo HOM05D005607 ORTHO05D008142 2.2e-17 94.7 137 46.0
CBR_g2888 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-14 85.5 77 53.2
HanXRQChr10g0304121 Helianthus annuus HOM05D005607 ORTHO05D008142 3.2e-08 64.3 63 57.1
Cre05.g246300 Chlamydomonas reinhardtii HOM05D005607 ORTHO05D008142 2.7e-07 61.2 244 24.6


User provided reference genes

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