Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_22993_v3 Cicer arietinum L. HOM05D004171 ORTHO05D004983 1.1e-95 353.2 170 100.0
Psat4g140880 Pisum sativum HOM05D004171 ORTHO05D004983 5.0e-72 274.6 151 83.4
Medtr8g464760 Medicago truncatula HOM05D004171 ORTHO05D004983 1.5e-71 273.1 153 81.7
Lj3g0003583 Lotus japonicus HOM05D004171 ORTHO05D004983 9.4e-71 270.4 151 82.8
TPR.G25226 Trifolium pratense HOM05D004171 ORTHO05D004983 2.8e-67 258.8 154 78.6
arahy.Tifrunner.gnm1.ann1.SXKR4Z Arachis hypogaea HOM05D004171 ORTHO05D004983 5.4e-66 254.6 154 76.6
Glyma.12G134300 Glycine max HOM05D004171 ORTHO05D004983 1.5e-63 246.5 162 71.6
Lalb_Chr19g0134521 Lupinus albus HOM05D004171 ORTHO05D004983 5.5e-63 244.6 156 71.8
Phvul.011G138400 Phaseolus vulgaris HOM05D004171 ORTHO05D004983 1.4e-61 240.0 158 72.8
VMungo1127G0586 Vigna mungo HOM05D004171 ORTHO05D004983 4.0e-61 238.4 158 71.5
Lalb_Chr01g0017051 Lupinus albus HOM05D004171 ORTHO05D004983 1.2e-60 236.9 152 71.7
Oeu019367.1 Olea europaea HOM05D004171 ORTHO05D004983 1.2e-60 236.9 159 70.4
Actinidia09971 Actinidia chinensis HOM05D004171 ORTHO05D004983 3.7e-59 231.9 154 69.5
Sabra11G0111100 Salix brachista HOM05D004171 ORTHO05D004983 6.3e-59 231.1 156 66.7
Potri.011G126300 Populus trichocarpa HOM05D004171 ORTHO05D004983 1.1e-58 230.3 155 65.8
Rhsim06G0192400 Rhododendron simsii HOM05D004171 ORTHO05D004983 2.4e-58 229.2 154 67.5
Actinidia05147 Actinidia chinensis HOM05D004171 ORTHO05D004983 7.0e-58 227.6 153 69.3
Atru.chr2.2929 Acer truncatum HOM05D004171 ORTHO05D004983 1.6e-57 226.5 159 65.4
Glyma.12G218800 Glycine max HOM05D004171 ORTHO05D004983 2.7e-57 225.7 158 70.3
Oeu006766.1 Olea europaea HOM05D004171 ORTHO05D004983 5.9e-57 224.6 155 68.4
TAR629G3225 Trochodendron aralioides HOM05D004171 ORTHO05D004983 7.7e-57 224.2 155 65.8
Haze_09543 Corylus avellana HOM05D004171 ORTHO05D004983 1.3e-56 223.4 157 69.4
Ah.04g165380 Amaranthus hybridus HOM05D004171 ORTHO05D004983 2.9e-56 222.2 156 64.7
Nitab4.5_0000297g0160 Nicotiana tabacum HOM05D004171 ORTHO05D004983 3.8e-56 221.9 157 64.3
Peaxi162Scf01216g00047 Petunia axillaris HOM05D004171 ORTHO05D004983 5.0e-56 221.5 154 64.3
MSTRG.14383 Avicennia marina HOM05D004171 ORTHO05D004983 6.6e-56 221.1 152 64.5
CSS0009250 Camellia sinensis var. sinensis HOM05D004171 ORTHO05D004983 6.6e-56 221.1 152 67.8
arahy.Tifrunner.gnm1.ann1.EUN1K4 Arachis hypogaea HOM05D004171 ORTHO05D004983 8.6e-56 220.7 117 85.5
Cfa020499 Carpinus fangiana HOM05D004171 ORTHO05D004983 8.6e-56 220.7 152 70.4
Nitab4.5_0009110g0010 Nicotiana tabacum HOM05D004171 ORTHO05D004983 8.6e-56 220.7 157 64.3
TAR627G1073 Trochodendron aralioides HOM05D004171 ORTHO05D004983 1.5e-55 219.9 155 65.2
MSTRG.12927 Avicennia marina HOM05D004171 ORTHO05D004983 3.3e-55 218.8 151 62.9
VMungo1080G1500 Vigna mungo HOM05D004171 ORTHO05D004983 3.3e-55 218.8 154 66.9
Prupe.4G191500 Prunus persica HOM05D004171 ORTHO05D004983 4.3e-55 218.4 157 65.6
PGSC0003DMG400019283 Solanum tuberosum HOM05D004171 ORTHO05D004983 4.3e-55 218.4 159 62.3
arahy.Tifrunner.gnm1.ann1.H2QIWP Arachis hypogaea HOM05D004171 ORTHO05D004983 7.3e-55 217.6 159 67.9
arahy.Tifrunner.gnm1.ann1.UD3S3B Arachis hypogaea HOM05D004171 ORTHO05D004983 7.3e-55 217.6 159 67.9
Cc05_g12750 Coffea canephora HOM05D004171 ORTHO05D004983 2.1e-54 216.1 155 64.5
Dinv22359 Davidia involucrata HOM05D004171 ORTHO05D004983 2.1e-54 216.1 149 66.4
MD03G1217700 Malus domestica HOM05D004171 ORTHO05D004983 2.1e-54 216.1 157 65.6
MD11G1235500 Malus domestica HOM05D004171 ORTHO05D004983 2.1e-54 216.1 157 65.6
Solyc07g063620.3 Solanum lycopersicum HOM05D004171 ORTHO05D004983 2.1e-54 216.1 159 61.6
COL.COLO4_09488 Corchorus olitorius HOM05D004171 ORTHO05D004983 2.8e-54 215.7 157 65.0
Sopen07g031800 Solanum pennellii HOM05D004171 ORTHO05D004983 2.8e-54 215.7 159 61.6
Manes.15G082500 Manihot esculenta HOM05D004171 ORTHO05D004983 6.1e-54 214.5 162 61.7
CiPaw.11G177500 Carya illinoinensis HOM05D004171 ORTHO05D004983 1.0e-53 213.8 156 65.4
Gohir.A13G143300 Gossypium hirsutum HOM05D004171 ORTHO05D004983 1.4e-53 213.4 157 64.3
Gohir.D13G148000 Gossypium hirsutum HOM05D004171 ORTHO05D004983 1.4e-53 213.4 154 65.6
Gorai.013G165800 Gossypium raimondii HOM05D004171 ORTHO05D004983 1.4e-53 213.4 154 65.6
CiPaw.12G123300 Carya illinoinensis HOM05D004171 ORTHO05D004983 3.0e-53 212.2 158 63.9
FAN16G3093 Fragaria x ananassa HOM05D004171 ORTHO05D004983 3.0e-53 212.2 161 64.0
Aqoxy1G02716 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 4.0e-53 211.8 160 63.1
FAN11G0158 Fragaria x ananassa HOM05D004171 ORTHO05D004983 6.8e-53 211.1 161 64.0
AUR62015590 Chenopodium quinoa HOM05D004171 ORTHO05D004983 8.9e-53 210.7 153 64.1
FAN25G0362 Fragaria x ananassa HOM05D004171 ORTHO05D004983 8.9e-53 210.7 161 63.4
AUR62029303 Chenopodium quinoa HOM05D004171 ORTHO05D004983 1.2e-52 210.3 155 63.2
Ciclev10009152m.g Citrus clementina HOM05D004171 ORTHO05D004983 1.2e-52 210.3 158 59.5
HanXRQChr02g0031371 Helianthus annuus HOM05D004171 ORTHO05D004983 1.5e-52 209.9 154 62.3
Lj1A854T34 Lonicera japonica HOM05D004171 ORTHO05D004983 2.0e-52 209.5 152 63.2
PGR083G0998 Punica granatum HOM05D004171 ORTHO05D004983 2.0e-52 209.5 151 65.6
Duzib213G0518 Durio zibethinus HOM05D004171 ORTHO05D004983 3.4e-52 208.8 157 63.7
CAN.G162.108 Capsicum annuum HOM05D004171 ORTHO05D004983 5.7e-52 208.0 159 60.4
Migut.H01900 Erythranthe guttata HOM05D004171 ORTHO05D004983 5.7e-52 208.0 158 62.7
Nn1g06780 Nelumbo nucifera HOM05D004171 ORTHO05D004983 5.7e-52 208.0 153 63.4
Thecc.07G070400 Theobroma cacao HOM05D004171 ORTHO05D004983 5.7e-52 208.0 161 60.2
Manes.03G117000 Manihot esculenta HOM05D004171 ORTHO05D004983 7.5e-52 207.6 160 61.9
Cpa.g.sc12.36 Carica papaya HOM05D004171 ORTHO05D004983 9.8e-52 207.2 154 64.9
Lsat_1_v5_gn_7_105981 Lactuca sativa HOM05D004171 ORTHO05D004983 9.8e-52 207.2 160 58.1
Duzib268G0239 Durio zibethinus HOM05D004171 ORTHO05D004983 1.3e-51 206.8 155 61.9
FvH4_3g21110 Fragaria vesca HOM05D004171 ORTHO05D004983 1.3e-51 206.8 161 62.1
SGA_v2.0_scaffold9G04958 Striga asiatica HOM05D004171 ORTHO05D004983 1.7e-51 206.5 152 60.5
Gohir.A04G025600 Gossypium hirsutum HOM05D004171 ORTHO05D004983 2.2e-51 206.1 154 63.0
Eucgr.F01074 Eucalyptus grandis HOM05D004171 ORTHO05D004983 3.7e-51 205.3 152 63.2
RcHm_v2.0_Chr5g0036121 Rosa chinensis HOM05D004171 ORTHO05D004983 3.7e-51 205.3 161 60.9
SalBow7G4117 Salvia bowleyana HOM05D004171 ORTHO05D004983 3.7e-51 205.3 152 63.2
Gohir.D05G362300 Gossypium hirsutum HOM05D004171 ORTHO05D004983 4.9e-51 204.9 154 63.0
Gorai.009G430400 Gossypium raimondii HOM05D004171 ORTHO05D004983 6.4e-51 204.5 154 63.0
EL10Ac4g08047 Beta vulgaris HOM05D004171 ORTHO05D004983 1.1e-50 203.8 153 64.7
MBI18_g27681_MAGBIO Magnolia biondii HOM05D004171 ORTHO05D004983 1.1e-50 203.8 150 65.3
THA.LOC104799905 Tarenaya hassleriana HOM05D004171 ORTHO05D004983 1.1e-50 203.8 164 57.9
Duzib170G1088 Durio zibethinus HOM05D004171 ORTHO05D004983 1.4e-50 203.4 160 60.6
MBI02_g13230_MAGBIO Magnolia biondii HOM05D004171 ORTHO05D004983 1.4e-50 203.4 158 63.3
QL08p017518 Quercus lobata HOM05D004171 ORTHO05D004983 1.4e-50 203.4 163 62.0
MBI18_g19831_MAGBIO Magnolia biondii HOM05D004171 ORTHO05D004983 1.8e-50 203.0 151 62.9
Sed0025378 Sechium edule HOM05D004171 ORTHO05D004983 1.8e-50 203.0 151 61.6
ClCG11G018550 Citrullus lanatus HOM05D004171 ORTHO05D004983 2.4e-50 202.6 153 63.4
PSO675G0635 Papaver somniferum HOM05D004171 ORTHO05D004983 5.4e-50 201.4 157 61.8
Hund23371 Selenicereus undatus HOM05D004171 ORTHO05D004983 5.4e-50 201.4 158 62.0
Dinv08350 Davidia involucrata HOM05D004171 ORTHO05D004983 2.0e-49 199.5 123 72.4
PSO541G5656 Papaver somniferum HOM05D004171 ORTHO05D004983 3.5e-49 198.7 157 59.9
CSS0026220 Camellia sinensis var. sinensis HOM05D004171 ORTHO05D004983 4.6e-49 198.4 153 60.1
Sed0003677 Sechium edule HOM05D004171 ORTHO05D004983 5.9e-49 198.0 148 61.5
THA.LOC104813397 Tarenaya hassleriana HOM05D004171 ORTHO05D004983 5.9e-49 198.0 169 56.2
Sp7g25280 Schrenkiella parvula HOM05D004171 ORTHO05D004983 1.0e-48 197.2 164 56.1
CARHR235000 Cardamine hirsuta HOM05D004171 ORTHO05D004983 1.3e-48 196.8 161 55.3
CsaV3_3G044320 Cucumis sativus L. HOM05D004171 ORTHO05D004983 1.7e-48 196.4 156 60.9
MELO3C018184.2 Cucumis melo HOM05D004171 ORTHO05D004983 2.3e-48 196.1 156 60.9
vmacro11810 Vaccinium macrocarpon HOM05D004171 ORTHO05D004983 3.9e-48 195.3 153 60.8
Thhalv10025946m.g Eutrema salsugineum HOM05D004171 ORTHO05D004983 6.6e-48 194.5 163 55.2
AT5G54240 Arabidopsis thaliana HOM05D004171 ORTHO05D004983 8.6e-48 194.1 166 53.6
BcaB08g35778 Brassica carinata HOM05D004171 ORTHO05D004983 8.6e-48 194.1 164 55.5
BcaC04g20360 Brassica carinata HOM05D004171 ORTHO05D004983 1.1e-47 193.7 164 54.9
A10p11530 Brassica napus HOM05D004171 ORTHO05D004983 1.1e-47 193.7 164 54.9
BolC9t57324H Brassica oleracea HOM05D004171 ORTHO05D004983 1.1e-47 193.7 164 54.9
BraA10t43247Z Brassica rapa HOM05D004171 ORTHO05D004983 1.1e-47 193.7 164 54.9
AL7G25450 Arabidopsis lyrata HOM05D004171 ORTHO05D004983 1.5e-47 193.4 162 55.6
C09p44520 Brassica napus HOM05D004171 ORTHO05D004983 2.5e-47 192.6 164 54.3
Thhalv10014333m.g Eutrema salsugineum HOM05D004171 ORTHO05D004983 2.5e-47 192.6 164 54.3
Hma1.2p1_1176F.1_g264170 Hydrangea macrophylla HOM05D004171 ORTHO05D004983 2.5e-47 192.6 153 57.5
AT4G27350 Arabidopsis thaliana HOM05D004171 ORTHO05D004983 3.3e-47 192.2 162 54.3
BcaB05g22115 Brassica carinata HOM05D004171 ORTHO05D004983 3.3e-47 192.2 164 54.9
Nn1g03875 Nelumbo nucifera HOM05D004171 ORTHO05D004983 4.3e-47 191.8 151 59.6
Sc16g0006730 Simmondsia chinensis HOM05D004171 ORTHO05D004983 5.6e-47 191.4 151 58.3
GSVIVG01014444001 Vitis vinifera HOM05D004171 ORTHO05D004983 5.6e-47 191.4 153 60.8
Aa31LG3G10200 Aethionema arabicum HOM05D004171 ORTHO05D004983 9.5e-47 190.7 164 53.7
AL8G29560 Arabidopsis lyrata HOM05D004171 ORTHO05D004983 1.2e-46 190.3 166 53.0
CARHR267500 Cardamine hirsuta HOM05D004171 ORTHO05D004983 1.2e-46 190.3 165 54.5
Sp6g16280 Schrenkiella parvula HOM05D004171 ORTHO05D004983 1.2e-46 190.3 164 53.7
PGR031G0147 Punica granatum HOM05D004171 ORTHO05D004983 2.1e-46 189.5 160 59.4
BraA02t06113Z Brassica rapa HOM05D004171 ORTHO05D004983 2.8e-46 189.1 164 53.7
A02p10500 Brassica napus HOM05D004171 ORTHO05D004983 8.0e-46 187.6 164 53.0
Carub.0008s1458 Capsella rubella HOM05D004171 ORTHO05D004983 1.0e-45 187.2 168 51.8
CDE02G1151 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 1.0e-45 187.2 155 56.8
unitig_699.g19211 Utricularia gibba HOM05D004171 ORTHO05D004983 1.4e-45 186.8 151 58.3
BcaNung03036 Brassica carinata HOM05D004171 ORTHO05D004983 1.8e-45 186.4 167 52.1
BcaNung05201 Brassica carinata HOM05D004171 ORTHO05D004983 1.8e-45 186.4 167 52.1
Carub.0007s1352 Capsella rubella HOM05D004171 ORTHO05D004983 2.3e-45 186.0 162 54.3
BcaC09g50581 Brassica carinata HOM05D004171 ORTHO05D004983 3.1e-45 185.7 165 52.7
BcaC09g50583 Brassica carinata HOM05D002586 ORTHO05D007009 3.1e-45 185.7 165 52.7
C01p23480 Brassica napus HOM05D004171 ORTHO05D004983 3.1e-45 185.7 165 52.7
BolC1t02294H Brassica oleracea HOM05D004171 ORTHO05D004983 3.1e-45 185.7 165 52.7
ECA236G3492 Erigeron canadensis HOM05D004171 ORTHO05D004983 4.0e-45 185.3 151 57.0
CANSAT11G0840 Cannabis sativa HOM05D004171 ORTHO05D004983 6.8e-45 184.5 158 59.5
CDE01G0586 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 1.2e-44 183.7 151 59.6
BcaNung05200 Brassica carinata HOM05D004171 ORTHO05D004983 1.5e-44 183.3 166 52.4
A01p18530 Brassica napus HOM05D004171 ORTHO05D004983 3.4e-44 182.2 166 51.8
BraA01t01802Z Brassica rapa HOM05D004171 ORTHO05D004983 3.4e-44 182.2 166 51.8
Aa31LG5G10160 Aethionema arabicum HOM05D002586 ORTHO05D007009 9.8e-44 180.6 172 51.7
TWI38G2120 Tripterygium wilfordii HOM05D004171 ORTHO05D004983 1.7e-43 179.9 117 65.0
Eucgr.F03360 Eucalyptus grandis HOM05D004171 ORTHO05D004983 2.2e-43 179.5 118 71.2
ATR0693G292 Amborella trichopoda HOM05D004171 ORTHO05D004983 1.4e-42 176.8 161 50.3
DCAR_009989 Daucus carota HOM05D004171 ORTHO05D004983 1.4e-42 176.8 117 65.0
FAN21G0927 Fragaria x ananassa HOM05D004171 ORTHO05D004983 3.2e-42 175.6 152 61.2
HPP92_012360 Vanilla planifolia HOM05D004171 ORTHO05D004983 1.2e-41 173.7 157 54.1
TWI39G0675 Tripterygium wilfordii HOM05D004171 ORTHO05D004983 2.0e-41 172.9 116 65.5
Zm00001eb324170 Zea mays HOM05D004171 ORTHO05D004983 4.6e-41 171.8 154 56.5
Gohir.D08G031500 Gossypium hirsutum HOM05D004171 ORTHO05D004983 1.1e-39 167.2 153 52.9
DCAR_008697 Daucus carota HOM05D004171 ORTHO05D004983 2.5e-39 166.0 142 54.2
Gohir.A08G020900 Gossypium hirsutum HOM05D004171 ORTHO05D004983 2.5e-39 166.0 153 52.9
Os07g0559400 Oryza sativa ssp. japonica HOM05D004171 ORTHO05D004983 3.3e-39 165.6 160 53.1
Gorai.004G029100 Gossypium raimondii HOM05D004171 ORTHO05D004983 9.5e-39 164.1 153 52.3
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 6.2e-38 161.4 116 59.5
C02p17300 Brassica napus HOM05D004171 ORTHO05D004983 1.8e-37 159.8 133 57.1
BolC2t07830H Brassica oleracea HOM05D004171 ORTHO05D004983 1.8e-37 159.8 133 57.1
BolC2t07836H Brassica oleracea HOM05D004171 ORTHO05D004983 1.8e-37 159.8 133 57.1
SEGI_27365 Sequoiadendron giganteum HOM05D004171 ORTHO05D004983 6.4e-35 151.4 118 53.4
Mapoly0102s0009 Marchantia polymorpha HOM05D004171 ORTHO05D004983 1.3e-32 143.7 122 51.6
SMO116G0055 Selaginella moellendorffii HOM05D004171 ORTHO05D004983 1.1e-31 140.6 118 50.8
CDE12G0832 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 2.2e-27 126.3 106 55.7
Pp3c3_11900 Physcomitrium patens HOM05D004171 ORTHO05D004983 2.2e-27 126.3 173 38.2
CBR_g24077 Chara braunii HOM05D004171 ORTHO05D004983 5.4e-26 121.7 119 44.5
BcaNung05202 Brassica carinata HOM05D004171 ORTHO05D004983 1.2e-25 120.6 113 51.3
CBR_g54085 Chara braunii HOM05D000019 ORTHO05D000002 3.3e-23 112.5 154 37.7
Potri.001G408001 Populus trichocarpa HOM05D004171 ORTHO05D004983 1.6e-22 110.2 68 66.2
CAN.G847.1 Capsicum annuum HOM05D004171 ORTHO05D004983 8.1e-22 107.8 80 58.8
AagrBONN_evm.TU.Sc2ySwM_228.913 Anthoceros agrestis HOM05D004171 ORTHO05D004983 2.0e-20 103.2 84 50.0
CAN.G187.6 Capsicum annuum HOM05D004171 ORTHO05D004983 6.0e-17 91.7 68 57.4
CDE05G1305 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 2.8e-14 82.8 153 31.4


User provided reference genes

Program Settings