Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_22927_v3 Cicer arietinum L. HOM05D001166 ORTHO05D000992 8.6e-44 179.9 87 100.0
Glyma.11G125700 Glycine max HOM05D001166 ORTHO05D000992 7.3e-11 70.5 72 54.2
Glyma.12G050300 Glycine max HOM05D001166 ORTHO05D000992 9.6e-11 70.1 72 54.2
VMungo1127G1453 Vigna mungo HOM05D001166 ORTHO05D000992 6.2e-10 67.4 72 52.8
CANSAT78G1110 Cannabis sativa HOM05D001166 ORTHO05D000992 1.8e-09 65.9 72 48.6
Phvul.011G052401 Phaseolus vulgaris HOM05D001166 ORTHO05D000992 6.9e-09 63.9 72 50.0
ClCG07G011690 Citrullus lanatus HOM05D001166 ORTHO05D000992 2.6e-08 62.0 72 48.6
VMungo1080G0792 Vigna mungo HOM05D001166 ORTHO05D000992 3.4e-08 61.6 72 50.0
MELO3C017793.2 Cucumis melo HOM05D001166 ORTHO05D000992 5.8e-08 60.8 72 47.2
CsaV3_4G002520 Cucumis sativus L. HOM05D001166 ORTHO05D000992 5.8e-08 60.8 72 47.2
PGR142G2872 Punica granatum HOM05D001166 ORTHO05D000992 5.8e-08 60.8 72 50.0
Sc25g0002610 Simmondsia chinensis HOM05D001166 ORTHO05D000992 7.6e-08 60.5 75 44.0
Ah.07g202420 Amaranthus hybridus HOM05D001166 ORTHO05D000992 9.9e-08 60.1 72 48.6
Phvul.005G154800 Phaseolus vulgaris HOM05D001166 ORTHO05D000992 9.9e-08 60.1 72 48.6
Glyma.13G346000 Glycine max HOM05D001166 ORTHO05D000992 1.3e-07 59.7 72 48.6
Glyma.15G028300 Glycine max HOM05D001166 ORTHO05D000992 1.3e-07 59.7 72 48.6
Sed0000827 Sechium edule HOM05D001166 ORTHO05D000992 1.7e-07 59.3 72 47.2
Lalb_Chr24g0396711 Lupinus albus HOM05D001166 ORTHO05D000992 2.2e-07 58.9 66 53.0
THA.LOC104802640 Tarenaya hassleriana HOM05D001166 ORTHO05D000992 2.9e-07 58.5 72 45.8
Lalb_Chr22g0352041 Lupinus albus HOM05D001166 ORTHO05D000992 3.8e-07 58.2 66 51.5
Hund12399 Selenicereus undatus HOM05D001166 ORTHO05D000992 8.4e-07 57.0 70 48.6
Lalb_Chr14g0372581 Lupinus albus HOM05D001166 ORTHO05D000992 1.1e-06 56.6 66 53.0
Eucgr.G02017 Eucalyptus grandis HOM05D001166 ORTHO05D000992 1.4e-06 56.2 69 44.9
Medtr2g099155 Medicago truncatula HOM05D001166 ORTHO05D000992 1.9e-06 55.8 68 47.1
TPR.G18625 Trifolium pratense HOM05D001166 ORTHO05D000992 2.4e-06 55.5 62 50.0
AUR62023826 Chenopodium quinoa HOM05D001166 ORTHO05D000992 3.2e-06 55.1 70 47.1
Dinv44161 Davidia involucrata HOM05D001166 ORTHO05D000992 3.2e-06 55.1 80 42.5
MD04G1046300 Malus domestica HOM05D001166 ORTHO05D000992 3.2e-06 55.1 72 43.1
CDE04G0690 Ceratophyllum demersum HOM05D001166 ORTHO05D000992 4.2e-06 54.7 70 45.7
CDE02G2455 Ceratophyllum demersum HOM05D001166 ORTHO05D000992 5.4e-06 54.3 70 45.7
CsaV3_5G017490 Cucumis sativus L. HOM05D001166 ORTHO05D000992 7.1e-06 53.9 66 43.9
arahy.Tifrunner.gnm1.ann1.X8XU5X Arachis hypogaea HOM05D001166 ORTHO05D000992 9.3e-06 53.5 64 48.4
Prupe.1G199800 Prunus persica HOM05D001166 ORTHO05D000992 9.3e-06 53.5 72 41.7
Sed0024255 Sechium edule HOM05D001166 ORTHO05D000992 9.3e-06 53.5 70 44.3


User provided reference genes

Program Settings