Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_22834_v3 Cicer arietinum L. HOM05D007063 ORTHO05D008822 2.7e-21 106.7 254 100.0
Ca_25038_v3 Cicer arietinum L. HOM05D007063 ORTHO05D008822 2.7e-21 106.7 254 98.8
Ca_25037_v3 Cicer arietinum L. HOM05D007063 ORTHO05D008822 4.9e-15 85.9 39 100.0
TPR.G21860 Trifolium pratense HOM05D007063 ORTHO05D008822 5.4e-14 82.4 39 97.4
TPR.G10111 Trifolium pratense HOM05D007063 ORTHO05D008822 1.2e-13 81.3 37 97.3
VMungo0251G0088 Vigna mungo HOM05D007063 ORTHO05D008822 6.7e-12 75.5 37 89.2
Phvul.003G071600 Phaseolus vulgaris HOM05D007063 ORTHO05D008822 4.8e-10 69.3 32 96.9
Psat4g129080 Pisum sativum HOM05D007063 ORTHO05D008822 3.1e-09 66.6 30 96.7
TAR376G0861 Trochodendron aralioides HOM05D007063 ORTHO05D008822 4.0e-09 66.2 37 75.7
Actinidia19847 Actinidia chinensis HOM05D007063 ORTHO05D008822 1.5e-08 64.3 38 71.1
Aqoxy3G00599 Aquilegia oxysepala HOM05D007063 ORTHO05D008822 2.0e-08 63.9 38 71.1
CSS0032839 Camellia sinensis var. sinensis HOM05D007063 ORTHO05D008822 2.0e-08 63.9 36 72.2
CSS0043069 Camellia sinensis var. sinensis HOM05D007063 ORTHO05D008822 2.0e-08 63.9 36 72.2
TWI36G0287 Tripterygium wilfordii HOM05D007063 ORTHO05D008822 2.6e-08 63.5 39 71.8
Lalb_Chr05g0230141 Lupinus albus HOM05D007063 ORTHO05D008822 4.5e-08 62.8 33 81.8
COL.COLO4_04706 Corchorus olitorius HOM05D007063 ORTHO05D008822 2.2e-07 60.5 36 72.2
Gohir.D02G168800 Gossypium hirsutum HOM05D007063 ORTHO05D008822 2.9e-07 60.1 37 67.6
Gorai.005G189200 Gossypium raimondii HOM05D007063 ORTHO05D008822 2.9e-07 60.1 37 67.6
RcHm_v2.0_Chr4g0445191 Rosa chinensis HOM05D007063 ORTHO05D008822 2.9e-07 60.1 35 71.4
Ciclev10030848m.g Citrus clementina HOM05D007063 ORTHO05D008822 3.8e-07 59.7 33 75.8
MBI16_g31483_MAGBIO Magnolia biondii HOM05D007063 ORTHO05D008822 3.8e-07 59.7 38 63.2
RhsimUnG0180400 Rhododendron simsii HOM05D007063 ORTHO05D008822 3.8e-07 59.7 38 65.8
RhsimUnG0211600 Rhododendron simsii HOM05D007063 ORTHO05D008822 3.8e-07 59.7 38 65.8
Nitab4.5_0000408g0040 Nicotiana tabacum HOM05D007063 ORTHO05D008822 4.9e-07 59.3 36 61.1
Gohir.A03G145400 Gossypium hirsutum HOM05D007063 ORTHO05D008822 6.4e-07 58.9 37 67.6
PGSC0003DMG401022625 Solanum tuberosum HOM05D007063 ORTHO05D008822 6.4e-07 58.9 34 64.7
Thecc.02G235700 Theobroma cacao HOM05D007063 ORTHO05D008822 6.4e-07 58.9 37 67.6
Sopen05g002660 Solanum pennellii HOM05D007063 ORTHO05D008822 1.1e-06 58.2 36 63.9
FvH4_4g35550 Fragaria vesca HOM05D007063 ORTHO05D008822 1.9e-06 57.4 35 68.6
FAN12G0771 Fragaria x ananassa HOM05D007063 ORTHO05D008822 1.9e-06 57.4 35 68.6
FAN17G0779 Fragaria x ananassa HOM05D007063 ORTHO05D008822 1.9e-06 57.4 35 68.6
FAN22G1231 Fragaria x ananassa HOM05D007063 ORTHO05D008822 1.9e-06 57.4 35 68.6
Nitab4.5_0001726g0080 Nicotiana tabacum HOM05D007063 ORTHO05D008822 1.9e-06 57.4 36 61.1
Cfa009057 Carpinus fangiana HOM05D007063 ORTHO05D008822 3.2e-06 56.6 29 82.8
Duzib251G0007 Durio zibethinus HOM05D007063 ORTHO05D008822 3.2e-06 56.6 35 71.4
QL03p066494 Quercus lobata HOM05D007063 ORTHO05D008822 3.2e-06 56.6 28 89.3
Haze_12090 Corylus avellana HOM05D007063 ORTHO05D008822 4.2e-06 56.2 28 85.7
FAN07G2566 Fragaria x ananassa HOM05D007063 ORTHO05D008822 5.5e-06 55.8 35 65.7
MD13G1082300 Malus domestica HOM05D007063 ORTHO05D008822 5.5e-06 55.8 35 65.7
Oeu057168.1 Olea europaea HOM05D007063 ORTHO05D008822 5.5e-06 55.8 35 65.7
MSTRG.7841 Avicennia marina HOM05D007063 ORTHO05D008822 9.3e-06 55.1 38 60.5


User provided reference genes

Program Settings