Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_22699_v3 Cicer arietinum L. HOM05D000163 ORTHO05D007238 3.9e-99 364.8 180 100.0
TPR.G36785 Trifolium pratense HOM05D000163 ORTHO05D007238 4.3e-82 308.1 183 86.3
Medtr5g032010 Medicago truncatula HOM05D000163 ORTHO05D007238 5.3e-80 301.2 183 83.6
Psat2g085040 Pisum sativum HOM05D000163 ORTHO05D007238 8.7e-75 283.9 184 78.8
Glyma.09G199700 Glycine max HOM05D000163 ORTHO05D007238 2.7e-68 262.3 186 74.2
Glyma.01G022600 Glycine max HOM05D000163 ORTHO05D007238 1.1e-66 256.9 186 72.0
VMungo1215G2255 Vigna mungo HOM05D000163 ORTHO05D007238 1.6e-65 253.1 186 71.0
Phvul.002G146600 Phaseolus vulgaris HOM05D000163 ORTHO05D007238 1.8e-64 249.6 185 70.3
Lalb_Chr05g0216411 Lupinus albus HOM05D000163 ORTHO05D007238 2.4e-64 249.2 187 73.3
Lj2g0021033 Lotus japonicus HOM05D000163 ORTHO05D007238 5.5e-61 238.0 185 68.6
Medtr8g068530 Medicago truncatula HOM05D000163 ORTHO05D007238 4.2e-53 211.8 179 63.1
arahy.Tifrunner.gnm1.ann1.GQR14W Arachis hypogaea HOM05D000163 ORTHO05D007238 3.9e-51 205.3 199 56.3
arahy.Tifrunner.gnm1.ann1.KUKC4D Arachis hypogaea HOM05D000163 ORTHO05D007238 3.9e-51 205.3 199 56.3
Psat4g119880 Pisum sativum HOM05D000163 ORTHO05D007238 5.2e-51 204.9 186 60.2
TPR.G29834 Trifolium pratense HOM05D000163 ORTHO05D007238 1.7e-49 199.9 195 57.9
Glyma.18G147800 Glycine max HOM05D000163 ORTHO05D007238 6.3e-49 198.0 188 59.0
QL06p035865 Quercus lobata HOM05D000163 ORTHO05D007238 9.7e-42 174.1 186 50.5
Haze_03883 Corylus avellana HOM05D000163 ORTHO05D007238 6.3e-41 171.4 185 51.9
CiPaw.08G140700 Carya illinoinensis HOM05D000163 ORTHO05D007238 1.1e-40 170.6 162 57.4
arahy.Tifrunner.gnm1.ann1.C8JRG8 Arachis hypogaea HOM05D000163 ORTHO05D007238 7.0e-40 167.9 168 56.0
CiPaw.07G046900 Carya illinoinensis HOM05D000163 ORTHO05D007238 7.0e-40 167.9 163 58.3
arahy.Tifrunner.gnm1.ann1.K97DW8 Arachis hypogaea HOM05D000163 ORTHO05D007238 2.0e-39 166.4 167 56.3
Thecc.01G089600 Theobroma cacao HOM05D000163 ORTHO05D007238 2.7e-39 166.0 181 50.8
Atru.chr3.1235 Acer truncatum HOM05D000163 ORTHO05D007238 2.5e-37 159.5 191 50.8
FvH4_1g19550 Fragaria vesca HOM05D000163 ORTHO05D007238 1.6e-36 156.8 158 50.6
Prupe.6G202700 Prunus persica HOM05D000163 ORTHO05D007238 2.7e-36 156.0 178 50.6
CSS0006841 Camellia sinensis var. sinensis HOM05D000163 ORTHO05D007238 4.7e-36 155.2 159 50.3
Manes.12G125600 Manihot esculenta HOM05D000163 ORTHO05D007238 8.0e-36 154.5 157 54.1
GSVIVG01002533001 Vitis vinifera HOM05D000163 ORTHO05D007238 3.0e-35 152.5 159 53.5
FAN23G2370 Fragaria x ananassa HOM05D000163 ORTHO05D007238 5.2e-35 151.8 158 50.0
RcHm_v2.0_Chr2g0111061 Rosa chinensis HOM05D000163 ORTHO05D007238 6.8e-35 151.4 173 48.0
FAN28G0345 Fragaria x ananassa HOM05D000163 ORTHO05D007238 1.5e-34 150.2 156 50.6
Ciclev10024909m.g Citrus clementina HOM05D000163 ORTHO05D007238 2.0e-34 149.8 187 48.1
Solyc11g010700.3 Solanum lycopersicum HOM05D000163 ORTHO05D007238 2.0e-34 149.8 159 52.2
CANSAT01G2766 Cannabis sativa HOM05D000163 ORTHO05D007238 2.6e-34 149.4 168 53.0
Lju188A3T32 Lonicera japonica HOM05D000163 ORTHO05D007238 2.6e-34 149.4 157 52.9
Sopen11g005500 Solanum pennellii HOM05D000163 ORTHO05D007238 4.4e-34 148.7 159 52.2
Prupe.6G202800 Prunus persica HOM05D000163 ORTHO05D007238 7.5e-34 147.9 187 46.5
ClCG01G018320 Citrullus lanatus HOM05D000163 ORTHO05D007238 1.7e-33 146.7 159 52.8
Duzib147G1104 Durio zibethinus HOM05D000163 ORTHO05D007238 1.1e-32 144.1 224 42.9
CSS0046669 Camellia sinensis var. sinensis HOM05D000163 ORTHO05D007238 1.8e-32 143.3 158 47.5
AUR62003671 Chenopodium quinoa HOM05D000163 ORTHO05D007238 4.1e-32 142.1 187 45.5
Actinidia28820 Actinidia chinensis HOM05D000163 ORTHO05D007238 5.4e-32 141.7 154 49.4
AUR62017981 Chenopodium quinoa HOM05D000163 ORTHO05D007238 9.1e-32 141.0 188 46.3
Peaxi162Scf00474g00727 Petunia axillaris HOM05D000163 ORTHO05D007238 9.1e-32 141.0 153 50.3
CsaV3_6G044950 Cucumis sativus L. HOM05D000163 ORTHO05D007238 2.7e-31 139.4 162 48.1
Gohir.D03G035600 Gossypium hirsutum HOM05D000163 ORTHO05D007238 4.5e-31 138.7 183 47.0
Gorai.003G037200 Gossypium raimondii HOM05D000163 ORTHO05D007238 4.5e-31 138.7 183 47.0
Sed0011050 Sechium edule HOM05D000163 ORTHO05D007238 4.5e-31 138.7 185 45.9
Gohir.A02G145000 Gossypium hirsutum HOM05D000163 ORTHO05D007238 7.7e-31 137.9 183 46.4
MD15G1311300 Malus domestica HOM05D000163 ORTHO05D007238 1.3e-30 137.1 168 44.6
TAR628G1057 Trochodendron aralioides HOM05D000163 ORTHO05D007238 3.8e-30 135.6 165 46.7
EL10Ac6g15196 Beta vulgaris HOM05D000163 ORTHO05D007238 6.5e-30 134.8 163 47.9
FAN23G0056 Fragaria x ananassa HOM05D000163 ORTHO05D007238 8.6e-30 134.4 157 48.4
Hund16524 Selenicereus undatus HOM05D000163 ORTHO05D007238 1.9e-29 133.3 160 46.2
MD15G1311200 Malus domestica HOM05D000163 ORTHO05D007238 2.5e-29 132.9 190 45.3
PGR031G1719 Punica granatum HOM05D000163 ORTHO05D007238 2.5e-29 132.9 168 45.2
MELO3C007711.2 Cucumis melo HOM05D000163 ORTHO05D007238 7.2e-29 131.3 162 47.5
Dinv13593 Davidia involucrata HOM05D000163 ORTHO05D007238 1.2e-28 130.6 168 45.8
TWI74G0424 Tripterygium wilfordii HOM05D000163 ORTHO05D007238 2.1e-28 129.8 161 47.2
Cc07_g14020 Coffea canephora HOM05D000163 ORTHO05D007238 8.0e-28 127.9 180 39.4
FAN26G3396 Fragaria x ananassa HOM05D000163 ORTHO05D007238 1.0e-27 127.5 186 43.5
Ah.03g139890 Amaranthus hybridus HOM05D000163 ORTHO05D007238 8.8e-27 124.4 157 44.6
Eucgr.I00562 Eucalyptus grandis HOM05D000163 ORTHO05D007238 2.6e-26 122.9 155 43.9
RcHm_v2.0_Chr2g0111051 Rosa chinensis HOM05D000163 ORTHO05D007238 3.7e-25 119.0 208 38.0
vmacro13011 Vaccinium macrocarpon HOM05D000163 ORTHO05D007238 4.9e-25 118.6 157 43.3
MSTRG.2599 Avicennia marina HOM05D000163 ORTHO05D007238 8.3e-25 117.9 159 46.5
Cpa.g.sc55.16 Carica papaya HOM05D000163 ORTHO05D007238 8.3e-25 117.9 142 50.0
Nitab4.5_0003930g0030 Nicotiana tabacum HOM05D000163 ORTHO05D007238 1.1e-24 117.5 157 44.6
Aqoxy6G00857 Aquilegia oxysepala HOM05D000163 ORTHO05D007238 1.4e-24 117.1 158 42.4
CAN.G1344.21 Capsicum annuum HOM05D000163 ORTHO05D007238 4.1e-24 115.5 131 50.4
CARHR279480 Cardamine hirsuta HOM05D000163 ORTHO05D007238 7.0e-24 114.8 158 43.0
SGA_v2.0_scaffold195G40858 Striga asiatica HOM05D000163 ORTHO05D007238 2.7e-23 112.8 168 41.7
Rhsim08G0016900 Rhododendron simsii HOM05D000163 ORTHO05D007238 3.5e-23 112.5 159 42.1
Carub.0008s2636 Capsella rubella HOM05D000163 ORTHO05D007238 5.9e-23 111.7 158 44.3
vmacro18552 Vaccinium macrocarpon HOM05D000163 ORTHO05D007238 5.9e-23 111.7 187 33.2
Aa31LG1G16490 Aethionema arabicum HOM05D000163 ORTHO05D007238 1.0e-22 110.9 162 42.6
BcaC04g23261 Brassica carinata HOM05D000163 ORTHO05D007238 1.7e-22 110.2 161 41.6
Oeu046550.1 Olea europaea HOM05D000163 ORTHO05D007238 1.7e-22 110.2 170 38.2
BolC3t18309H Brassica oleracea HOM05D000163 ORTHO05D007238 2.3e-22 109.8 164 40.2
THA.LOC104798703 Tarenaya hassleriana HOM05D000163 ORTHO05D007238 2.9e-22 109.4 162 41.4
BraA06t26161Z Brassica rapa HOM05D000163 ORTHO05D007238 5.0e-22 108.6 158 41.1
Rhsim10G0173400 Rhododendron simsii HOM05D000163 ORTHO05D007238 5.0e-22 108.6 159 40.9
BcaC01g02782 Brassica carinata HOM05D000163 ORTHO05D007238 8.6e-22 107.8 164 39.6
C03p60480 Brassica napus HOM05D000163 ORTHO05D007238 8.6e-22 107.8 164 39.6
Thhalv10003671m.g Eutrema salsugineum HOM05D000163 ORTHO05D007238 1.1e-21 107.5 158 41.1
AL8G43090 Arabidopsis lyrata HOM05D000163 ORTHO05D007238 1.5e-21 107.1 164 40.9
vmacro21790 Vaccinium macrocarpon HOM05D000163 ORTHO05D007238 1.5e-21 107.1 180 33.3
ECA238G1044 Erigeron canadensis HOM05D000163 ORTHO05D007238 1.9e-21 106.7 166 38.6
Lsat_1_v5_gn_2_70260 Lactuca sativa HOM05D000163 ORTHO05D007238 1.9e-21 106.7 157 40.1
BcaB04g20018 Brassica carinata HOM05D000163 ORTHO05D007238 2.5e-21 106.3 160 41.9
vmacro18554 Vaccinium macrocarpon HOM05D000163 ORTHO05D007238 2.5e-21 106.3 180 33.3
C09p10550 Brassica napus HOM05D000163 ORTHO05D007238 4.3e-21 105.5 161 40.4
BolC9t53955H Brassica oleracea HOM05D000163 ORTHO05D007238 4.3e-21 105.5 161 40.4
A06p32350 Brassica napus HOM05D000163 ORTHO05D007238 7.3e-21 104.8 158 39.9
Sp2g28590 Schrenkiella parvula HOM05D000163 ORTHO05D007238 7.3e-21 104.8 158 41.8
BraA09t36558Z Brassica rapa HOM05D000163 ORTHO05D007238 1.6e-20 103.6 161 41.6
SalBow3G1437 Salvia bowleyana HOM05D000163 ORTHO05D007238 1.6e-20 103.6 163 40.5
AT5G65500 Arabidopsis thaliana HOM05D000163 ORTHO05D007238 2.1e-20 103.2 164 41.5
Ca_22617_v3 Cicer arietinum L. HOM05D000163 ORTHO05D007238 2.1e-20 103.2 107 50.5
FAN19G1963 Fragaria x ananassa HOM05D000163 ORTHO05D007238 2.8e-20 102.8 157 40.8
HanXRQChr14g0442991 Helianthus annuus HOM05D000163 ORTHO05D007238 3.6e-20 102.4 160 36.2
A09p09060 Brassica napus HOM05D000163 ORTHO05D007238 4.7e-20 102.1 161 41.0
Nitab4.5_0006221g0050 Nicotiana tabacum HOM05D000163 ORTHO05D007238 6.8e-19 98.2 157 40.1
Oeu046549.1 Olea europaea HOM05D000163 ORTHO05D007238 8.9e-19 97.8 138 43.5
THA.LOC104819290 Tarenaya hassleriana HOM05D000163 ORTHO05D007238 1.5e-18 97.1 162 38.9
Oeu012457.2 Olea europaea HOM05D000163 ORTHO05D007238 2.0e-18 96.7 156 37.8
MBI16_g12473_MAGBIO Magnolia biondii HOM05D000163 ORTHO05D007238 4.9e-17 92.0 146 40.4
CANSAT01G1878 Cannabis sativa HOM05D000163 ORTHO05D007238 8.3e-17 91.3 158 38.6
MSTRG.23382 Avicennia marina HOM05D000163 ORTHO05D007238 9.2e-16 87.8 157 38.2
vmacro21793 Vaccinium macrocarpon HOM05D000163 ORTHO05D007238 3.9e-14 82.4 98 40.8
Sc03g0000410 Simmondsia chinensis HOM05D000163 ORTHO05D007238 1.6e-12 77.0 198 28.8
MBI16_g45668_MAGBIO Magnolia biondii HOM05D000163 ORTHO05D007238 4.7e-12 75.5 120 40.8
Dinv36941 Davidia involucrata HOM05D000163 ORTHO05D007238 2.9e-09 66.2 66 48.5
Potri.007G011500 Populus trichocarpa HOM05D000163 ORTHO05D007238 3.7e-09 65.9 75 49.3
Actinidia06509 Actinidia chinensis HOM05D004648 ORTHO05D005782 4.9e-09 65.5 129 33.3
SEGI_31692 Sequoiadendron giganteum HOM05D002645 ORTHO05D002741 6.6e-06 55.1 70 44.3
SEGI_11517 Sequoiadendron giganteum HOM05D002645 ORTHO05D002741 8.6e-06 54.7 87 35.6


User provided reference genes

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