Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_22696_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 4.3e-80 301.2 147 100.0
Ca_07639_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 4.9e-76 287.7 145 97.2
Ca_19490_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.4e-75 286.2 145 97.2
Ca_02743_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.9e-75 285.8 145 96.6
Ca_07633_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.9e-75 285.8 145 96.6
Ca_07730_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 3.9e-49 198.4 137 67.2
Ca_10305_v3 Cicer arietinum L. HOM05D001134 ORTHO05D000002 1.3e-44 183.3 145 60.0
Ca_11127_v3 Cicer arietinum L. HOM05D001650 ORTHO05D001592 1.3e-44 183.3 145 60.0
Ca_16129_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.9e-43 179.5 137 61.3
Lalb_Chr24g0402721 Lupinus albus HOM05D000004 ORTHO05D000002 8.2e-39 164.1 145 55.9
Ca_04545_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.2e-37 160.2 137 56.9
Ca_27450_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 3.6e-34 148.7 115 58.3
Ca_12309_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.8e-33 146.4 145 52.4
Ca_22822_v3 Cicer arietinum L. HOM05D003606 ORTHO05D000002 3.0e-33 145.6 145 51.7
Ca_23727_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.2e-32 143.7 145 51.0
Ca_08465_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 5.7e-32 141.4 145 49.7
Ca_11906_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 6.3e-31 137.9 122 54.9
Ca_11845_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.7e-28 129.8 148 48.6
Ca_14712_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.9e-28 129.0 151 48.3
Ca_28249_v3 Cicer arietinum L. HOM05D000290 ORTHO05D000002 3.8e-28 128.6 132 51.5
Ca_20427_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 5.0e-28 128.3 144 47.9
Ca_11846_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 8.5e-28 127.5 145 49.0
Ca_07517_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.1e-27 127.1 147 48.3
Ca_01353_v3 Cicer arietinum L. HOM05D001049 ORTHO05D014288 6.1e-26 121.3 68 95.6
Ca_16100_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.5e-24 116.7 139 43.2
Ca_19472_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 6.3e-23 111.3 83 61.4
Ca_01976_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.2e-21 107.1 140 38.6
Ca_12969_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.5e-19 99.4 86 50.0
Ca_26814_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 5.5e-19 98.2 106 42.5
Ca_07353_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.8e-18 95.9 112 42.9
Ca_12559_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.8e-17 93.2 138 39.1
VMungo1383G0727 Vigna mungo HOM05D000250 ORTHO05D002850 1.8e-17 93.2 114 43.9
TPR.G9173 Trifolium pratense HOM05D000004 ORTHO05D000002 4.0e-17 92.0 150 35.3
Ca_10432_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 5.2e-17 91.7 86 46.5
Psat0s1287g0080 Pisum sativum HOM05D000004 ORTHO05D000002 6.8e-17 91.3 150 38.7
VMungo0251G3747 Vigna mungo HOM05D003893 ORTHO05D005167 6.8e-17 91.3 60 58.3
Ca_14397_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.5e-16 90.1 127 42.5
Ca_05479_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 3.4e-16 89.0 59 59.3
Psat3g172640 Pisum sativum HOM05D000028 ORTHO05D000390 3.4e-16 89.0 108 40.7
Ca_12602_v3 Cicer arietinum L. HOM05D000836 ORTHO05D000002 7.5e-16 87.8 55 58.2
TPR.G31865 Trifolium pratense HOM05D000004 ORTHO05D000002 7.5e-16 87.8 80 50.0
Psat7g066480 Pisum sativum HOM05D000004 ORTHO05D000002 9.8e-16 87.4 84 44.0
Psat7g152800 Pisum sativum HOM05D000004 ORTHO05D000002 1.7e-15 86.7 147 35.4
Ca_19904_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009229 2.2e-15 86.3 111 45.9
Psat0s1991g0120 Pisum sativum HOM05D000004 ORTHO05D000002 3.7e-15 85.5 85 40.0
Psat4g137240 Pisum sativum HOM05D000004 ORTHO05D000002 3.7e-15 85.5 61 54.1
Psat5g016360 Pisum sativum HOM05D000004 ORTHO05D000002 3.7e-15 85.5 148 36.5
Psat6g022920 Pisum sativum HOM05D000004 ORTHO05D000002 8.3e-15 84.3 61 52.5
Ca_03855_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.4e-14 83.6 62 58.1
Ca_27335_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.8e-14 83.2 102 47.1
Psat2g032840 Pisum sativum HOM05D000004 ORTHO05D000002 3.1e-14 82.4 54 55.6
Psat4g053400 Pisum sativum HOM05D000004 ORTHO05D000002 1.2e-13 80.5 54 53.7
Psat1g213840 Pisum sativum HOM05D000004 ORTHO05D000002 1.6e-13 80.1 54 53.7
TPR.G17488 Trifolium pratense HOM05D000004 ORTHO05D000002 1.6e-13 80.1 58 51.7
Psat0s2723g0120 Pisum sativum HOM05D003114 ORTHO05D003519 2.7e-13 79.3 58 50.0
Psat5g155160 Pisum sativum HOM05D000004 ORTHO05D000002 2.7e-13 79.3 54 53.7
Psat7g007480 Pisum sativum HOM05D000004 ORTHO05D000002 2.7e-13 79.3 54 53.7
VMungo1127G1769 Vigna mungo HOM05D003938 ORTHO05D004759 4.5e-13 78.6 169 32.0
Psat6g208920 Pisum sativum HOM05D000004 ORTHO05D000002 7.8e-13 77.8 83 44.6
Psat7g172320 Pisum sativum HOM05D000004 ORTHO05D000002 7.8e-13 77.8 58 46.6
Psat5g213280 Pisum sativum HOM05D000004 ORTHO05D000002 1.0e-12 77.4 126 33.3
Psat5g191920 Pisum sativum HOM05D000004 ORTHO05D000002 1.7e-12 76.6 88 43.2
VMungo1215G1246 Vigna mungo HOM05D048760 ORTHO05D051604 2.3e-12 76.3 143 35.0
TPR.G6695 Trifolium pratense HOM05D000004 ORTHO05D000002 6.6e-12 74.7 78 47.4
ECA232G1905 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.1e-11 73.9 58 51.7
Psat1g036880 Pisum sativum HOM05D000004 ORTHO05D000002 1.5e-11 73.6 54 51.9
VMungo0464G1208 Vigna mungo HOM05D000004 ORTHO05D000002 1.9e-11 73.2 85 37.6
ECA238G2583 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.5e-11 72.8 134 32.1
TWI15G0520 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 2.5e-11 72.8 96 40.6
VMungo0720G2483 Vigna mungo HOM05D002038 ORTHO05D030727 2.5e-11 72.8 87 44.8
Psat0s3577g0080 Pisum sativum HOM05D000004 ORTHO05D000002 7.3e-11 71.2 99 35.4
ECA232G0044 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.5e-11 70.9 59 47.5
Psat5g083560 Pisum sativum HOM05D000004 ORTHO05D000002 9.5e-11 70.9 140 34.3
ECA238G3110 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.1e-10 69.7 59 49.2
Ca_05108_v3 Cicer arietinum L. HOM05D006182 ORTHO05D007236 3.6e-10 68.9 141 34.8
ECA234G3749 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.6e-10 68.9 59 45.8
Psat5g159360 Pisum sativum HOM05D000004 ORTHO05D000002 3.6e-10 68.9 160 31.2
VMungo1383G3216 Vigna mungo HOM05D001447 ORTHO05D010195 3.6e-10 68.9 140 32.9
ECA233G5755 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.7e-10 68.6 53 47.2
Psat0s4384g0120 Pisum sativum HOM05D000004 ORTHO05D000002 4.7e-10 68.6 113 33.6
Psat3g027240 Pisum sativum HOM05D000004 ORTHO05D000002 8.0e-10 67.8 94 37.2
VMungo0251G1446 Vigna mungo HOM05D012939 ORTHO05D010195 1.8e-09 66.6 85 35.3
Ca_23873_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.3e-09 66.2 64 53.1
VMungo1080G1902 Vigna mungo HOM05D000054 ORTHO05D010195 2.3e-09 66.2 88 34.1
Carub.0001s3392 Capsella rubella HOM05D000004 ORTHO05D000002 3.1e-09 65.9 70 40.0
ECA233G4342 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.2e-09 65.1 58 43.1
Thhalv10002674m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 5.2e-09 65.1 163 28.8
VMungo0720G2098 Vigna mungo HOM05D004618 ORTHO05D005318 6.8e-09 64.7 108 30.6
BcaC09g51720 Brassica carinata HOM05D000004 ORTHO05D000002 8.9e-09 64.3 58 44.8
Ca_16686_v3 Cicer arietinum L. HOM05D009527 ORTHO05D013850 8.9e-09 64.3 148 31.1
Ah.09g237740 Amaranthus hybridus HOM05D016549 ORTHO05D000002 1.2e-08 63.9 89 38.2
ECA233G4375 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.2e-08 63.9 55 45.5
Hma1.2p1_0812F.1_g222280 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 1.2e-08 63.9 82 37.8
QL12p011078 Quercus lobata HOM05D000432 ORTHO05D000002 1.2e-08 63.9 109 34.9
Sp6g11780 Schrenkiella parvula HOM05D011239 ORTHO05D000002 1.2e-08 63.9 58 44.8
VMungo0720G2664 Vigna mungo HOM05D000797 ORTHO05D007935 1.2e-08 63.9 108 36.1
CANSAT54G0404 Cannabis sativa HOM05D000004 ORTHO05D000002 2.0e-08 63.2 52 44.2
Sopen00g004920 Solanum pennellii HOM05D000004 ORTHO05D000002 2.0e-08 63.2 125 29.6
Ca_27264_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.6e-08 62.8 130 31.5
PGSC0003DMG402029058 Solanum tuberosum HOM05D000004 ORTHO05D000002 2.6e-08 62.8 133 30.8
Ca_12114_v3 Cicer arietinum L. HOM05D003122 ORTHO05D010195 3.4e-08 62.4 61 34.4
Ciclev10030074m.g Citrus clementina HOM05D000004 ORTHO05D000002 3.4e-08 62.4 130 35.4
VMungo0331G1288 Vigna mungo HOM05D004910 ORTHO05D010195 4.4e-08 62.0 65 36.9
VMungo0647G0036 Vigna mungo HOM05D001600 ORTHO05D001502 4.4e-08 62.0 81 38.3
Ca_25152_v3 Cicer arietinum L. HOM05D002770 ORTHO05D003011 5.8e-08 61.6 61 34.4
Sp6g11810 Schrenkiella parvula HOM05D000004 ORTHO05D000002 5.8e-08 61.6 52 46.2
VMungo0720G2070 Vigna mungo HOM05D012939 ORTHO05D010195 1.3e-07 60.5 74 33.8
CANSAT35G0070 Cannabis sativa HOM05D000004 ORTHO05D000002 1.7e-07 60.1 51 47.1
COL.COLO4_16347 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.7e-07 60.1 58 39.7
Thhalv10003066m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 1.7e-07 60.1 140 26.4
Lsat_1_v5_gn_8_119700 Lactuca sativa HOM05D000004 ORTHO05D000002 1.7e-07 60.1 49 44.9
arahy.Tifrunner.gnm1.ann1.K49PTT Arachis hypogaea HOM05D000004 ORTHO05D000002 2.9e-07 59.3 151 31.1
VMungo0720G2490 Vigna mungo HOM05D012939 ORTHO05D010195 2.9e-07 59.3 84 36.9
VMungo1080G0003 Vigna mungo HOM05D005948 ORTHO05D007689 2.9e-07 59.3 72 33.3
TPR.G11444 Trifolium pratense HOM05D000004 ORTHO05D000002 3.7e-07 58.9 50 46.0
TPR.G6321 Trifolium pratense HOM05D000004 ORTHO05D000002 3.7e-07 58.9 57 42.1
ECA233G0504 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.4e-07 58.2 59 39.0
TPR.G6049 Trifolium pratense HOM05D012325 ORTHO05D013858 6.4e-07 58.2 61 36.1
VMungo0720G1249 Vigna mungo HOM05D000002 ORTHO05D000047 6.4e-07 58.2 85 32.9
Sopen07g005380 Solanum pennellii HOM05D000004 ORTHO05D000048 8.3e-07 57.8 75 33.3
VMungo0251G0994 Vigna mungo HOM05D002797 ORTHO05D010195 8.3e-07 57.8 80 35.0
VMungo1080G1583 Vigna mungo HOM05D001060 ORTHO05D010195 8.3e-07 57.8 149 27.5
Ca_19227_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 1.1e-06 57.4 53 37.7
VMungo0251G2087 Vigna mungo HOM05D009527 ORTHO05D010195 1.1e-06 57.4 130 27.7
Ah.11g044520 Amaranthus hybridus HOM05D065232 ORTHO05D000002 1.4e-06 57.0 84 35.7
Ca_13622_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.4e-06 57.0 53 35.8
Psat0s1002g0160 Pisum sativum HOM05D004994 ORTHO05D006359 1.4e-06 57.0 69 42.0
THA.LOC104801707 Tarenaya hassleriana HOM05D008905 ORTHO05D000002 1.4e-06 57.0 58 34.5
VMungo0720G2151 Vigna mungo HOM05D012939 ORTHO05D010195 1.4e-06 57.0 84 38.1
Gohir.A08G195550 Gossypium hirsutum HOM05D001322 ORTHO05D001301 1.9e-06 56.6 78 33.3
Psat2g029440 Pisum sativum HOM05D000004 ORTHO05D000002 1.9e-06 56.6 77 32.5
TPR.G26576 Trifolium pratense HOM05D000004 ORTHO05D000002 1.9e-06 56.6 137 34.3
VMungo1080G0040 Vigna mungo HOM05D003438 ORTHO05D000002 1.9e-06 56.6 57 40.4
Ah.02g117930 Amaranthus hybridus HOM05D016549 ORTHO05D000002 2.4e-06 56.2 53 43.4
Ca_05816_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 2.4e-06 56.2 50 40.0
Ca_23810_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 2.4e-06 56.2 50 38.0
PSO675G7897 Papaver somniferum HOM05D000004 ORTHO05D000002 2.4e-06 56.2 135 30.4
Sopen04g023950 Solanum pennellii HOM05D000004 ORTHO05D000002 2.4e-06 56.2 75 32.0
THA.LOC104815241 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.4e-06 56.2 59 35.6
TPR.G27313 Trifolium pratense HOM05D000004 ORTHO05D000002 2.4e-06 56.2 51 41.2
VMungo0464G0875 Vigna mungo HOM05D003387 ORTHO05D005400 2.4e-06 56.2 141 27.7
PSO782G3295 Papaver somniferum HOM05D000004 ORTHO05D000002 3.2e-06 55.8 48 45.8
Psat1g072000 Pisum sativum HOM05D000004 ORTHO05D000002 3.2e-06 55.8 111 26.1
Psat3g181760 Pisum sativum HOM05D000004 ORTHO05D000002 3.2e-06 55.8 111 26.1
Psat3g181800 Pisum sativum HOM05D000004 ORTHO05D000002 3.2e-06 55.8 111 26.1
TPR.G34991 Trifolium pratense HOM05D009527 ORTHO05D013850 3.2e-06 55.8 58 39.7
BcaB07g31748 Brassica carinata HOM05D000004 ORTHO05D000002 4.1e-06 55.5 56 39.3
Ca_27463_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 4.1e-06 55.5 62 29.0
Psat2g165880 Pisum sativum HOM05D000004 ORTHO05D000002 4.1e-06 55.5 77 31.2
Psat5g253680 Pisum sativum HOM05D000004 ORTHO05D000002 4.1e-06 55.5 44 47.7
VMungo0647G0580 Vigna mungo HOM05D000660 ORTHO05D010195 4.1e-06 55.5 126 28.6
Ah.05g174530 Amaranthus hybridus HOM05D016549 ORTHO05D000002 5.4e-06 55.1 87 32.2
MELO3C028848.2 Cucumis melo HOM05D009641 ORTHO05D013069 5.4e-06 55.1 62 33.9
Psat3g025360 Pisum sativum HOM05D000004 ORTHO05D000002 5.4e-06 55.1 51 39.2
Psat7g017240 Pisum sativum HOM05D000004 ORTHO05D000002 5.4e-06 55.1 51 39.2
Sp3g22620 Schrenkiella parvula HOM05D008905 ORTHO05D000002 5.4e-06 55.1 50 46.0
SpUn0027_0100 Schrenkiella parvula HOM05D008905 ORTHO05D000002 5.4e-06 55.1 50 46.0
Ah.02g124620 Amaranthus hybridus HOM05D013246 ORTHO05D000002 7.0e-06 54.7 51 37.3
Psat0s3433g0040 Pisum sativum HOM05D000004 ORTHO05D000002 7.0e-06 54.7 74 35.1
Psat5g099160 Pisum sativum HOM05D000004 ORTHO05D000002 7.0e-06 54.7 51 39.2
VMungo1383G1247 Vigna mungo HOM05D000402 ORTHO05D010195 7.0e-06 54.7 118 29.7
Ah.15g096030 Amaranthus hybridus HOM05D016549 ORTHO05D000002 9.2e-06 54.3 51 41.2
Ca_25971_v3 Cicer arietinum L. HOM05D001297 ORTHO05D001135 9.2e-06 54.3 53 34.0


User provided reference genes

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