Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_22692_v3 Cicer arietinum L. HOM05D000027 ORTHO05D000066 6.7e-40 166.8 77 100.0
Medtr5g031830 Medicago truncatula HOM05D000027 ORTHO05D000066 2.8e-22 108.2 64 79.7
Medtr5g031860 Medicago truncatula HOM05D000027 ORTHO05D000066 6.3e-22 107.1 64 78.1
Psat2g095440 Pisum sativum HOM05D000027 ORTHO05D000066 1.4e-21 105.9 64 76.6
TPR.G36759 Trifolium pratense HOM05D000027 ORTHO05D000066 6.9e-21 103.6 62 80.6
TPR.G36810 Trifolium pratense HOM05D000027 ORTHO05D000066 9.0e-21 103.2 65 76.9
Medtr5g031840 Medicago truncatula HOM05D000027 ORTHO05D000066 1.1e-18 96.3 64 75.0
Phvul.002G146000 Phaseolus vulgaris HOM05D000027 ORTHO05D000066 5.7e-15 84.0 66 62.1
Phvul.002G146100 Phaseolus vulgaris HOM05D000027 ORTHO05D000066 9.7e-15 83.2 66 62.1
Lj2g0027802 Lotus japonicus HOM05D000027 ORTHO05D000066 2.8e-14 81.6 63 68.3
Phvul.002G146200 Phaseolus vulgaris HOM05D000027 ORTHO05D000066 3.7e-14 81.3 66 60.6
Glyma.01G021700 Glycine max HOM05D000027 ORTHO05D000066 5.3e-13 77.4 65 63.1
VMungo1215G1057 Vigna mungo HOM05D000027 ORTHO05D000066 3.4e-12 74.7 66 56.1
arahy.Tifrunner.gnm1.ann1.6MFS5J Arachis hypogaea HOM05D000027 ORTHO05D000066 1.1e-10 69.7 64 60.9
arahy.Tifrunner.gnm1.ann1.G302UQ Arachis hypogaea HOM05D000027 ORTHO05D000066 1.1e-10 69.7 64 60.9
arahy.Tifrunner.gnm1.ann1.K7H1JC Arachis hypogaea HOM05D000027 ORTHO05D000066 1.9e-10 68.9 64 59.4
arahy.Tifrunner.gnm1.ann1.Z0W8F3 Arachis hypogaea HOM05D000027 ORTHO05D000066 1.9e-10 68.9 64 59.4
VMungo1215G0827 Vigna mungo HOM05D000027 ORTHO05D000066 2.5e-10 68.6 63 54.0
Lalb_Chr09g0325951 Lupinus albus HOM05D000027 ORTHO05D000066 2.7e-09 65.1 63 57.1
Glyma.01G022300 Glycine max HOM05D000027 ORTHO05D000066 7.9e-09 63.5 51 64.7
CANSAT41G0002 Cannabis sativa HOM05D000027 ORTHO05D000066 2.3e-08 62.0 66 53.0
CANSAT56G4451 Cannabis sativa HOM05D000027 ORTHO05D000066 5.1e-08 60.8 66 51.5
Phvul.002G145900 Phaseolus vulgaris HOM05D000027 ORTHO05D000066 2.6e-07 58.5 51 58.8
Lsat_1_v5_gn_8_14400 Lactuca sativa HOM05D000027 ORTHO05D000066 5.7e-07 57.4 64 50.0
MSTRG.8983 Avicennia marina HOM05D000027 ORTHO05D000066 7.4e-07 57.0 65 53.8
Haze_17161 Corylus avellana HOM05D000027 ORTHO05D000066 7.4e-07 57.0 65 50.8
CiPaw.02G188500 Carya illinoinensis HOM05D000027 ORTHO05D000066 9.7e-07 56.6 66 53.0
QL08p062231 Quercus lobata HOM05D000027 ORTHO05D000066 9.7e-07 56.6 66 47.0
CSS0021287 Camellia sinensis var. sinensis HOM05D000027 ORTHO05D000066 1.3e-06 56.2 66 50.0
CSS0034687 Camellia sinensis var. sinensis HOM05D000027 ORTHO05D000066 1.3e-06 56.2 66 50.0
Haze_17160 Corylus avellana HOM05D000027 ORTHO05D000066 2.2e-06 55.5 62 51.6
QL08p062249 Quercus lobata HOM05D000027 ORTHO05D000066 2.2e-06 55.5 65 49.2
Manes.10G020130 Manihot esculenta HOM05D000027 ORTHO05D000066 2.8e-06 55.1 66 51.5
Nitab4.5_0002577g0120 Nicotiana tabacum HOM05D000027 ORTHO05D000066 2.8e-06 55.1 64 45.3
Nitab4.5_0007038g0020 Nicotiana tabacum HOM05D000027 ORTHO05D000066 2.8e-06 55.1 64 45.3
Sopen03g021610 Solanum pennellii HOM05D000027 ORTHO05D000066 2.8e-06 55.1 65 49.2
CSS0001680 Camellia sinensis var. sinensis HOM05D000027 ORTHO05D000066 3.7e-06 54.7 66 48.5
Lsat_1_v5_gn_8_14420 Lactuca sativa HOM05D000027 ORTHO05D000066 3.7e-06 54.7 64 46.9
Haze_17147 Corylus avellana HOM05D000027 ORTHO05D000066 4.8e-06 54.3 65 47.7
Manes.10G020400 Manihot esculenta HOM05D000027 ORTHO05D000066 4.8e-06 54.3 51 58.8
PGSC0003DMG400018416 Solanum tuberosum HOM05D000027 ORTHO05D000066 4.8e-06 54.3 65 50.8
HanXRQChr13g0394861 Helianthus annuus HOM05D000027 ORTHO05D000066 6.3e-06 53.9 65 49.2
TWI09G0305 Tripterygium wilfordii HOM05D000027 ORTHO05D000066 6.3e-06 53.9 51 58.8
Peaxi162Scf00611g00126 Petunia axillaris HOM05D000027 ORTHO05D000066 8.2e-06 53.5 64 46.9


User provided reference genes

Program Settings