Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_22684_v3 Cicer arietinum L. HOM05D007485 ORTHO05D009437 3.0e-54 214.9 109 100.0
Glyma.08G357300 Glycine max HOM05D007485 ORTHO05D009437 9.8e-13 77.0 68 66.2
Glyma.18G175800 Glycine max HOM05D007485 ORTHO05D009437 9.8e-13 77.0 68 66.2
Lalb_Chr19g0125461 Lupinus albus HOM05D007485 ORTHO05D009437 9.2e-11 70.5 52 71.2
Phvul.008G122300 Phaseolus vulgaris HOM05D007485 ORTHO05D009437 1.6e-10 69.7 68 60.3
TPR.G9157 Trifolium pratense HOM05D007485 ORTHO05D009437 2.0e-10 69.3 53 73.6
arahy.Tifrunner.gnm1.ann1.9XF3L6 Arachis hypogaea HOM05D007485 ORTHO05D009437 2.7e-10 68.9 54 70.4
arahy.Tifrunner.gnm1.ann1.W4TMFE Arachis hypogaea HOM05D007485 ORTHO05D009437 2.7e-10 68.9 54 70.4
Lj1g0002217 Lotus japonicus HOM05D007485 ORTHO05D009437 4.6e-10 68.2 53 71.7
VMungo1383G3371 Vigna mungo HOM05D007485 ORTHO05D009437 6.0e-10 67.8 68 60.3
Medtr7g059255 Medicago truncatula HOM05D007485 ORTHO05D009437 1.0e-09 67.0 53 69.8
C08p14780 Brassica napus HOM05D007485 ORTHO05D009437 6.6e-09 64.3 54 57.4
BraA08t35252Z Brassica rapa HOM05D007485 ORTHO05D009437 1.1e-08 63.5 54 57.4
Duzib133G1001 Durio zibethinus HOM05D007485 ORTHO05D009437 1.9e-08 62.8 52 61.5
BcaB03g13243 Brassica carinata HOM05D007485 ORTHO05D009437 4.3e-08 61.6 54 55.6
BcaC07g38678 Brassica carinata HOM05D007485 ORTHO05D009437 4.3e-08 61.6 54 55.6
BolC8t49113H Brassica oleracea HOM05D007485 ORTHO05D009437 4.3e-08 61.6 54 55.6
RcHm_v2.0_Chr6g0285341 Rosa chinensis HOM05D007485 ORTHO05D009437 9.5e-08 60.5 55 58.2
Aa31LG9G4570 Aethionema arabicum HOM05D007485 ORTHO05D009437 1.6e-07 59.7 52 57.7
A08p33350 Brassica napus HOM05D007485 ORTHO05D009437 2.8e-07 58.9 55 56.4
FvH4_2g19580 Fragaria vesca HOM05D007485 ORTHO05D009437 2.8e-07 58.9 53 56.6
FAN15G2643 Fragaria x ananassa HOM05D007485 ORTHO05D009437 2.8e-07 58.9 53 56.6
FAN24G1628 Fragaria x ananassa HOM05D007485 ORTHO05D009437 2.8e-07 58.9 53 56.6
FAN27G2610 Fragaria x ananassa HOM05D007485 ORTHO05D009437 2.8e-07 58.9 53 56.6
Nn1g03123 Nelumbo nucifera HOM05D007485 ORTHO05D009437 3.6e-07 58.5 52 57.7
AT4G13220 Arabidopsis thaliana HOM05D007485 ORTHO05D009437 4.7e-07 58.2 52 55.8
Potri.002G251800 Populus trichocarpa HOM05D007485 ORTHO05D009437 4.7e-07 58.2 82 45.1
AL9U10750 Arabidopsis lyrata HOM05D007485 ORTHO05D009437 6.2e-07 57.8 52 55.8
Ciclev10022604m.g Citrus clementina HOM05D007485 ORTHO05D009437 6.2e-07 57.8 52 53.8
Sp7g10710 Schrenkiella parvula HOM05D007485 ORTHO05D009437 6.2e-07 57.8 52 55.8
CARHR218700 Cardamine hirsuta HOM05D007485 ORTHO05D009437 8.0e-07 57.4 52 53.8
Eucgr.C02436 Eucalyptus grandis HOM05D007485 ORTHO05D009437 8.0e-07 57.4 54 63.0
Thhalv10026377m.g Eutrema salsugineum HOM05D007485 ORTHO05D009437 8.0e-07 57.4 52 55.8
Carub.0007s2945 Capsella rubella HOM05D007485 ORTHO05D009437 1.4e-06 56.6 52 53.8
THA.LOC104808772 Tarenaya hassleriana HOM05D007485 ORTHO05D009437 1.4e-06 56.6 52 50.0
Thecc.01G230100 Theobroma cacao HOM05D007485 ORTHO05D009437 1.4e-06 56.6 68 48.5
Gohir.A07G201700 Gossypium hirsutum HOM05D007485 ORTHO05D009437 1.8e-06 56.2 52 55.8
Gohir.D07G208000 Gossypium hirsutum HOM05D007485 ORTHO05D009437 1.8e-06 56.2 52 55.8
Gorai.001G234600 Gossypium raimondii HOM05D007485 ORTHO05D009437 1.8e-06 56.2 52 55.8
MD10G1169600 Malus domestica HOM05D007485 ORTHO05D009437 1.8e-06 56.2 55 54.5
Prupe.8G207500 Prunus persica HOM05D007485 ORTHO05D009437 1.8e-06 56.2 83 43.4
Cc01_g17350 Coffea canephora HOM05D007485 ORTHO05D009437 4.0e-06 55.1 47 57.4
PGR083G2217 Punica granatum HOM05D007485 ORTHO05D009437 5.2e-06 54.7 53 60.4
TWI59G0176 Tripterygium wilfordii HOM05D007485 ORTHO05D009437 6.8e-06 54.3 52 51.9
Cfa002536 Carpinus fangiana HOM05D001836 ORTHO05D001519 8.9e-06 53.9 84 45.2
Haze_24766 Corylus avellana HOM05D007485 ORTHO05D009437 8.9e-06 53.9 84 45.2
MD05G1180900 Malus domestica HOM05D007485 ORTHO05D009437 8.9e-06 53.9 55 52.7


User provided reference genes

Program Settings