Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_22482_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 4.1e-287 990.7 506 100.0
Ca_30349_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 2.2e-280 968.4 493 100.0
Psat4g108080 Pisum sativum HOM05D006455 ORTHO05D008098 3.0e-213 745.3 492 77.4
TPR.G31161 Trifolium pratense HOM05D006455 ORTHO05D008098 2.8e-211 738.8 493 77.9
Medtr8g071270 Medicago truncatula HOM05D006455 ORTHO05D008098 6.2e-211 737.6 495 78.0
Lj4g0021895 Lotus japonicus HOM05D006455 ORTHO05D008098 2.3e-189 666.0 494 72.3
arahy.Tifrunner.gnm1.ann1.E0JCGG Arachis hypogaea HOM05D006455 ORTHO05D008098 3.0e-181 639.0 496 66.9
arahy.Tifrunner.gnm1.ann1.U8H9H1 Arachis hypogaea HOM05D006455 ORTHO05D008098 2.5e-180 636.0 497 66.8
Lalb_Chr16g0391751 Lupinus albus HOM05D006455 ORTHO05D008098 3.7e-179 632.1 494 67.6
Glyma.16G105200 Glycine max HOM05D006455 ORTHO05D008098 2.0e-164 583.2 497 61.8
Phvul.003G279900 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 2.5e-159 566.2 497 62.2
VMungo0251G3325 Vigna mungo HOM05D006455 ORTHO05D008098 3.1e-154 549.3 496 60.5
Cfa012584 Carpinus fangiana HOM05D006455 ORTHO05D008098 1.5e-148 530.4 495 57.6
Haze_08072 Corylus avellana HOM05D006455 ORTHO05D008098 5.4e-146 521.9 494 57.1
CiPaw.12G071600 Carya illinoinensis HOM05D006455 ORTHO05D008098 9.8e-140 501.1 496 54.0
Prupe.2G049600 Prunus persica HOM05D006455 ORTHO05D008098 2.4e-138 496.5 496 51.2
QL12p000818 Quercus lobata HOM05D006455 ORTHO05D008098 5.4e-138 495.4 498 54.2
ClCG10G001240 Citrullus lanatus HOM05D006455 ORTHO05D008098 4.5e-137 492.3 499 53.7
RcHm_v2.0_Chr7g0228451 Rosa chinensis HOM05D006455 ORTHO05D008098 4.5e-137 492.3 493 53.5
MELO3C013818.2 Cucumis melo HOM05D006455 ORTHO05D008098 5.9e-137 491.9 505 52.7
TAR362G0985 Trochodendron aralioides HOM05D006455 ORTHO05D008098 3.8e-136 489.2 496 54.6
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 4.3e-135 485.7 498 51.4
GSVIVG01001915001 Vitis vinifera HOM05D006455 ORTHO05D008098 4.3e-135 485.7 497 52.9
CsaV3_3G001300 Cucumis sativus L. HOM05D006455 ORTHO05D008098 9.5e-135 484.6 498 50.4
FvH4_5g32260 Fragaria vesca HOM05D006455 ORTHO05D008098 9.5e-135 484.6 493 51.7
FAN18G4165 Fragaria x ananassa HOM05D006455 ORTHO05D008098 6.1e-134 481.9 493 51.5
Nn1g09557 Nelumbo nucifera HOM05D006455 ORTHO05D008098 1.5e-132 477.2 496 51.6
MD02G1270700 Malus domestica HOM05D006455 ORTHO05D008098 1.7e-131 473.8 492 49.2
FAN13G0315 Fragaria x ananassa HOM05D006455 ORTHO05D008098 1.8e-130 470.3 493 49.9
Gohir.A11G144500 Gossypium hirsutum HOM05D006455 ORTHO05D008098 1.6e-129 467.2 497 50.3
Lj1A106T21 Lonicera japonica HOM05D006455 ORTHO05D008098 1.6e-129 467.2 497 52.7
CANSAT21G2240 Cannabis sativa HOM05D006455 ORTHO05D008098 2.7e-129 466.5 497 50.5
Ciclev10014895m.g Citrus clementina HOM05D006455 ORTHO05D008098 8.6e-128 461.5 498 53.4
Sed0000077 Sechium edule HOM05D006455 ORTHO05D008098 1.5e-127 460.7 501 50.1
Gorai.007G161800 Gossypium raimondii HOM05D006455 ORTHO05D008098 2.5e-127 459.9 498 49.8
Manes.12G057502 Manihot esculenta HOM05D006455 ORTHO05D008098 2.5e-127 459.9 499 51.7
Manes.12G057904 Manihot esculenta HOM05D006455 ORTHO05D008098 3.3e-127 459.5 499 51.7
Migut.D00764 Erythranthe guttata HOM05D006455 ORTHO05D008098 3.6e-126 456.1 497 50.3
CSS0002127 Camellia sinensis var. sinensis HOM05D006455 ORTHO05D008098 1.8e-125 453.8 438 52.1
Atru.chr6.3495 Acer truncatum HOM05D006455 ORTHO05D008098 6.8e-125 451.8 497 51.7
Manes.12G057700 Manihot esculenta HOM05D006455 ORTHO05D008098 6.8e-125 451.8 499 51.7
Manes.12G057901 Manihot esculenta HOM05D006455 ORTHO05D008098 6.8e-125 451.8 499 51.7
Cpa.g.sc8.27 Carica papaya HOM05D006455 ORTHO05D008098 3.4e-124 449.5 497 49.9
Potri.014G174300 Populus trichocarpa HOM05D006455 ORTHO05D008098 5.8e-124 448.7 498 52.0
Thecc.01G205700 Theobroma cacao HOM05D006455 ORTHO05D008098 1.3e-123 447.6 497 50.1
TWI75G0274 Tripterygium wilfordii HOM05D006455 ORTHO05D008098 6.4e-123 445.3 495 48.1
Sopen09g013040 Solanum pennellii HOM05D006455 ORTHO05D008098 1.9e-122 443.7 496 48.6
Cc04_g10320 Coffea canephora HOM05D006455 ORTHO05D008098 3.2e-122 443.0 496 46.8
Peaxi162Scf00315g00814 Petunia axillaris HOM05D006455 ORTHO05D008098 2.0e-121 440.3 498 49.8
Lsat_1_v5_gn_5_176300 Lactuca sativa HOM05D006455 ORTHO05D008098 3.5e-121 439.5 497 46.9
COL.COLO4_29922 Corchorus olitorius HOM05D006455 ORTHO05D008098 1.7e-120 437.2 417 52.8
HanXRQChr01g0013871 Helianthus annuus HOM05D006455 ORTHO05D008098 3.9e-120 436.0 497 47.3
ECA248G0009 Erigeron canadensis HOM05D006455 ORTHO05D008098 6.6e-120 435.3 496 48.2
HanXRQChr01g0014041 Helianthus annuus HOM05D006455 ORTHO05D008098 6.6e-120 435.3 497 47.3
Solyc09g020150.4 Solanum lycopersicum HOM05D006455 ORTHO05D008098 1.1e-119 434.5 497 47.9
SGA_v2.0_scaffold158G37512 Striga asiatica HOM05D006455 ORTHO05D008098 1.9e-119 433.7 515 47.8
Hund02815 Selenicereus undatus HOM05D006455 ORTHO05D008098 2.5e-119 433.3 494 47.0
MSTRG.18514 Avicennia marina HOM05D006455 ORTHO05D008098 3.3e-119 433.0 497 49.5
Rhsim13G0055500 Rhododendron simsii HOM05D006455 ORTHO05D008098 5.6e-119 432.2 507 47.1
Sp2g18700 Schrenkiella parvula HOM05D006455 ORTHO05D008098 9.5e-119 431.4 500 48.6
AUR62028628 Chenopodium quinoa HOM05D006455 ORTHO05D008098 3.6e-118 429.5 494 46.6
Nitab4.5_0006514g0010 Nicotiana tabacum HOM05D006455 ORTHO05D008098 4.7e-118 429.1 496 49.2
AUR62008053 Chenopodium quinoa HOM05D006455 ORTHO05D008098 6.8e-117 425.2 496 45.4
Aqoxy2G04132 Aquilegia oxysepala HOM05D006455 ORTHO05D008098 1.2e-116 424.5 496 48.4
Sabra14G0133600 Salix brachista HOM05D006455 ORTHO05D008098 4.4e-116 422.5 497 50.5
Nitab4.5_0000077g0170 Nicotiana tabacum HOM05D006455 ORTHO05D008098 3.7e-115 419.5 496 48.4
PGR044G2428 Punica granatum HOM05D006455 ORTHO05D008098 2.4e-114 416.8 494 47.2
Sc05g0001610 Simmondsia chinensis HOM05D006455 ORTHO05D008098 3.2e-114 416.4 496 46.4
Eucgr.K02350 Eucalyptus grandis HOM05D006455 ORTHO05D008098 2.1e-113 413.7 494 47.4
Thhalv10003907m.g Eutrema salsugineum HOM05D006455 ORTHO05D008098 1.0e-112 411.4 498 48.4
vmacro02844 Vaccinium macrocarpon HOM05D006455 ORTHO05D008098 1.9e-111 407.1 503 48.1
AT5G48340 Arabidopsis thaliana HOM05D006455 ORTHO05D008098 5.6e-111 405.6 497 46.3
AL8G21110 Arabidopsis lyrata HOM05D006455 ORTHO05D008098 7.3e-111 405.2 502 46.6
BcaC06g30805 Brassica carinata HOM05D006455 ORTHO05D008098 1.6e-110 404.1 501 46.7
CARHR183890 Cardamine hirsuta HOM05D006455 ORTHO05D008098 3.6e-110 402.9 496 47.0
A06p39230 Brassica napus HOM05D006455 ORTHO05D008098 3.1e-109 399.8 503 46.7
BcaC06g30808 Brassica carinata HOM05D006455 ORTHO05D008098 4.0e-109 399.4 503 46.3
BraA06t26837Z Brassica rapa HOM05D006455 ORTHO05D008098 4.0e-109 399.4 505 46.5
PSO210G7796 Papaver somniferum HOM05D006455 ORTHO05D008098 4.0e-109 399.4 499 46.3
Carub.0008s0792 Capsella rubella HOM05D006455 ORTHO05D008098 6.8e-109 398.7 500 45.8
Manes.12G057900 Manihot esculenta HOM05D006455 ORTHO05D008098 2.9e-107 393.3 498 44.6
PSO210G0904 Papaver somniferum HOM05D006455 ORTHO05D008098 2.9e-107 393.3 498 45.8
C07p39110 Brassica napus HOM05D006455 ORTHO05D008098 4.9e-107 392.5 503 46.3
BolC7t44431H Brassica oleracea HOM05D006455 ORTHO05D008098 1.1e-106 391.3 504 46.6
Aa31LG5G9090 Aethionema arabicum HOM05D006455 ORTHO05D008098 1.4e-106 391.0 496 45.8
Manes.12G058105 Manihot esculenta HOM05D006455 ORTHO05D008098 4.6e-105 386.0 498 44.8
ATR0743G062 Amborella trichopoda HOM05D006455 ORTHO05D008098 6.0e-105 385.6 501 44.9
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 1.1e-103 381.3 494 41.9
SHI10210 Sapria himalayana HOM05D006455 ORTHO05D008098 2.9e-99 366.7 516 45.2
Actinidia23129 Actinidia chinensis HOM05D006455 ORTHO05D008098 4.2e-98 362.8 497 44.9
MBI07_g34151_MAGBIO Magnolia biondii HOM05D006455 ORTHO05D008098 1.2e-97 361.3 475 45.9
Os01g0897100 Oryza sativa ssp. japonica HOM05D006455 ORTHO05D008098 6.0e-97 359.0 496 42.3
Zm00001eb144730 Zea mays HOM05D006455 ORTHO05D008098 6.0e-97 359.0 516 39.5
Gohir.D11G150900 Gossypium hirsutum HOM05D006455 ORTHO05D008098 7.8e-97 358.6 374 52.4
DCAR_000439 Daucus carota HOM05D006455 ORTHO05D008098 1.3e-94 351.3 340 51.2
EL10Ac5g10573 Beta vulgaris HOM05D006455 ORTHO05D008098 9.0e-93 345.1 381 50.7
Ah.11g050710 Amaranthus hybridus HOM05D006455 ORTHO05D008098 1.4e-90 337.8 494 42.1
SEGI_16096 Sequoiadendron giganteum HOM05D006455 ORTHO05D008098 5.1e-88 329.3 510 41.6
HPP92_001271 Vanilla planifolia HOM05D006455 ORTHO05D008098 5.8e-84 315.8 328 46.6
Dinv07639 Davidia involucrata HOM05D006455 ORTHO05D008098 5.6e-79 299.3 391 41.9
Manes.12G058904 Manihot esculenta HOM05D006455 ORTHO05D008098 4.0e-77 293.1 269 55.8
Oeu030353.1 Olea europaea HOM05D006455 ORTHO05D008098 2.6e-68 263.8 329 47.7
PGSC0003DMG402020303 Solanum tuberosum HOM05D006455 ORTHO05D008098 8.5e-67 258.8 329 46.5
HPP92_001254 Vanilla planifolia HOM05D006455 ORTHO05D008098 1.5e-63 248.1 219 52.5
Manes.12G057503 Manihot esculenta HOM05D006455 ORTHO05D008098 6.5e-59 232.6 164 65.9
Manes.12G057505 Manihot esculenta HOM05D006455 ORTHO05D008098 6.5e-59 232.6 164 65.9
CDE05G1197 Ceratophyllum demersum HOM05D006455 ORTHO05D008098 6.9e-53 212.6 157 62.4
Mapoly0109s0061 Marchantia polymorpha HOM05D006455 ORTHO05D008098 1.7e-51 208.0 430 30.7
Pp3c10_13370 Physcomitrium patens HOM05D006455 ORTHO05D008098 2.6e-47 194.1 531 30.3
SMO200G0077 Selaginella moellendorffii HOM05D006455 ORTHO05D008098 2.6e-44 184.1 377 30.2
AagrBONN_evm.TU.Sc2ySwM_228.5553 Anthoceros agrestis HOM05D006455 ORTHO05D008098 4.0e-40 170.2 403 30.3
CBR_g48756 Chara braunii HOM05D006455 ORTHO05D000497 2.5e-34 151.0 407 28.7
Phvul.003G297266 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 5.5e-26 123.2 123 52.0
Manes.12G057504 Manihot esculenta HOM05D006455 ORTHO05D008098 5.2e-24 116.7 178 46.6
Manes.12G060108 Manihot esculenta HOM05D006455 ORTHO05D008098 6.8e-24 116.3 181 45.3
Oeu030354.1 Olea europaea HOM05D006455 ORTHO05D008098 2.8e-22 110.9 116 45.7
Zm00001eb128100 Zea mays HOM05D006455 ORTHO05D008098 4.1e-21 107.1 142 37.3
Zm00001eb274660 Zea mays HOM05D006455 ORTHO05D008098 2.0e-20 104.8 142 35.9
EL10Ac5g10574 Beta vulgaris HOM05D006455 ORTHO05D008098 3.5e-20 104.0 115 41.7
PGSC0003DMG400020304 Solanum tuberosum HOM05D006455 ORTHO05D008098 4.5e-20 103.6 115 43.5
Zm00001eb128090 Zea mays HOM05D006455 ORTHO05D008098 1.7e-19 101.7 173 34.1
Cre03.g197250 Chlamydomonas reinhardtii HOM05D006455 ORTHO05D008098 3.6e-17 94.0 217 31.3
Oeu003682.1 Olea europaea HOM05D006455 ORTHO05D008098 1.9e-10 71.6 117 35.0


User provided reference genes

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