Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_22478_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.3e-84 313.9 143 100.0
Ca_13678_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.7e-76 288.1 140 94.3
Ca_28370_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.4e-74 281.6 131 97.7
Ca_31096_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.4e-74 281.6 131 97.7
Ca_06513_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.0e-73 280.0 140 92.1
Ca_05491_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.2e-73 278.9 140 90.7
Ca_05231_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.2e-71 273.1 131 96.2
Ca_31217_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.1e-71 270.8 131 93.9
Ca_16771_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.3e-65 253.1 140 82.9
Ca_19385_v3 Cicer arietinum L. HOM05D000835 ORTHO05D002122 2.0e-58 229.2 114 91.2
Ca_09999_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.8e-57 224.9 113 90.3
Ca_09998_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.6e-55 218.4 104 95.2
Ca_01899_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.0e-54 216.9 120 82.5
Ca_07256_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 4.0e-54 214.9 102 95.1
Ca_10492_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.0e-54 214.9 102 96.1
Ca_20984_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 9.7e-53 210.3 105 89.5
Ca_10806_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.8e-52 208.8 100 93.0
Ca_03568_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.1e-43 178.3 91 89.0
Ca_19917_v3 Cicer arietinum L. HOM05D000012 ORTHO05D001060 3.5e-42 175.3 100 79.0
Ca_00657_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.1e-35 153.7 74 91.9
Ca_13474_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.7e-34 149.1 155 50.3
Ca_24276_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 7.8e-34 147.5 81 79.0
Ca_05534_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 9.5e-32 140.6 65 95.4
Ca_12256_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.6e-31 138.7 65 90.8
Ca_03929_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.8e-30 134.4 75 85.3
Ca_15168_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.8e-29 131.3 80 71.2
Ca_05966_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 9.8e-29 130.6 130 48.5
Ca_14105_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.9e-28 128.3 125 48.8
Ca_04586_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.3e-28 127.5 130 46.9
Ca_20151_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.3e-28 127.5 130 46.9
Ca_22851_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.3e-28 127.5 130 46.2
Ca_07671_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 1.4e-27 126.7 125 49.6
Ca_25322_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 7.0e-27 124.4 124 48.4
Ca_16741_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 9.2e-27 124.0 122 48.4
Ca_13087_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.0e-25 120.6 129 45.7
Ca_24031_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 1.3e-25 120.2 130 45.4
Ca_23731_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.3e-25 119.4 129 45.7
Ca_10886_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 1.5e-24 116.7 126 46.8
TPR.G8598 Trifolium pratense HOM05D005718 ORTHO05D004853 1.5e-24 116.7 136 40.4
Ca_25328_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.6e-24 114.8 107 50.5
Ca_02224_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 9.5e-24 114.0 133 42.1
Ca_02311_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 9.5e-24 114.0 109 49.5
Ca_13742_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 9.5e-24 114.0 129 39.5
Ca_04043_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.3e-22 109.4 130 41.5
Ca_13581_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.4e-21 105.5 98 50.0
Ca_22794_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.7e-20 103.2 109 43.1
Ca_00650_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 8.3e-20 100.9 130 41.5
Ca_03687_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.4e-19 100.1 120 40.8
Ca_05967_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.2e-19 99.0 86 53.5
Ca_05232_v3 Cicer arietinum L. HOM05D041768 ORTHO05D002183 5.4e-19 98.2 54 79.6
Ca_13126_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 7.0e-19 97.8 86 52.3
Ca_02277_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.6e-18 96.7 130 39.2
Ca_06912_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.5e-18 95.5 133 39.1
Ca_11967_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.3e-17 93.6 129 41.9
Ca_23051_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.3e-17 92.8 131 37.4
Ca_12050_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 5.0e-17 91.7 131 37.4
Ca_07982_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 8.6e-17 90.9 128 39.1
Ca_18178_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.6e-17 90.9 101 43.6
Ca_08449_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.1e-16 90.5 129 41.1
Ca_12157_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.5e-16 89.4 128 40.6
VMungo0647G2344 Vigna mungo HOM05D000176 ORTHO05D000106 3.3e-16 89.0 128 36.7
Ca_13604_v3 Cicer arietinum L. HOM05D041768 ORTHO05D002183 4.3e-16 88.6 52 78.8
Ca_07720_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 7.3e-16 87.8 128 40.6
Ca_11909_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.2e-15 87.0 129 41.1
Ca_13503_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.8e-15 85.9 130 42.3
Ca_14679_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.8e-15 85.9 86 45.3
Ca_26213_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 4.7e-15 85.1 127 37.8
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 6.2e-15 84.7 150 36.0
Ca_22382_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.3e-14 82.8 127 35.4
Ca_13973_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.1e-14 82.4 91 44.0
Ca_14807_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.2e-14 81.6 44 77.3
Ca_19837_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.2e-14 81.6 73 56.2
Ca_02100_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.8e-14 81.3 68 55.9
Ca_06407_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.8e-14 81.3 75 46.7
Lju279A7T18 Lonicera japonica HOM05D000176 ORTHO05D000106 6.8e-14 81.3 152 33.6
Ca_20173_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 8.9e-14 80.9 102 42.2
Ca_23052_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 8.9e-14 80.9 96 41.7
Ca_07608_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002268 1.5e-13 80.1 85 45.9
Ca_01588_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.0e-13 79.7 67 55.2
Ca_13267_v3 Cicer arietinum L. HOM05D002198 ORTHO05D002183 4.4e-13 78.6 68 52.9
Ca_01582_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.8e-13 78.2 78 50.0
MD17G1028300 Malus domestica HOM05D000176 ORTHO05D000106 1.7e-12 76.6 151 30.5
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-12 76.3 150 30.7
Lju1034C2T5 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-12 76.3 150 33.3
Ca_02962_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.9e-12 75.9 130 33.8
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 3.7e-12 75.5 149 29.5
Ca_01382_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 6.4e-12 74.7 113 38.9
Lj9C183T0 Lonicera japonica HOM05D000176 ORTHO05D002183 8.3e-12 74.3 149 28.9
Ca_30958_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.1e-11 73.9 68 48.5
Ca_14648_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.4e-11 73.6 76 42.1
Lj1A172T27 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-11 73.6 149 30.9
Lj5A194T79 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-11 73.2 149 29.5
Lj4C121T9 Lonicera japonica HOM05D000176 ORTHO05D000106 4.1e-11 72.0 150 28.7
Lj1C595G6 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-10 70.5 147 32.0
Lj9C343T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-10 70.5 149 28.2
VMungo1309G0077 Vigna mungo HOM05D000176 ORTHO05D000106 1.2e-10 70.5 134 30.6
Ca_22299_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.6e-10 70.1 128 34.4
RcHm_v2.0_Chr1g0332031 Rosa chinensis HOM05D000176 ORTHO05D000106 6.0e-10 68.2 148 26.4
Ca_15024_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 7.8e-10 67.8 114 36.0
Lj5A683T12 Lonicera japonica HOM05D000176 ORTHO05D000106 7.8e-10 67.8 143 32.2
Hma1.2p1_0293F.1_g116320 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 1.0e-09 67.4 146 30.1
Lj5C659T2 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-09 67.4 95 41.1
Lj6C514G1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-09 67.0 149 26.8
Ca_02615_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.7e-09 66.6 93 33.3
Ca_14516_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.7e-09 66.6 81 42.0
Hma1.2p1_0690F.1_g203890 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 1.7e-09 66.6 146 30.1
Ca_02570_v3 Cicer arietinum L. HOM05D001569 ORTHO05D002183 3.0e-09 65.9 138 27.5
Ca_14601_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.0e-09 65.9 72 43.1
TPR.G31932 Trifolium pratense HOM05D004942 ORTHO05D005687 3.0e-09 65.9 115 30.4
Hma1.2p1_0111F.1_g053640 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 3.9e-09 65.5 99 35.4
Ca_12158_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 5.1e-09 65.1 95 42.1
Lj8C214G5 Lonicera japonica HOM05D001508 ORTHO05D001381 5.1e-09 65.1 132 31.8
PSO675G7692 Papaver somniferum HOM05D000176 ORTHO05D000106 6.6e-09 64.7 148 25.7
Ca_14629_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.6e-09 64.3 76 43.4
Lj8C518G1 Lonicera japonica HOM05D000176 ORTHO05D000106 8.6e-09 64.3 156 29.5
TWI73G0304 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 8.6e-09 64.3 149 27.5
VMungo1215G1209 Vigna mungo HOM05D000374 ORTHO05D000238 8.6e-09 64.3 118 30.5
CSS0039650 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.1e-08 63.9 145 30.3
CSS0048717 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 1.1e-08 63.9 145 30.3
Ca_25437_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.1e-08 63.9 87 33.3
FvH4_6g36961 Fragaria vesca HOM05D000176 ORTHO05D000106 1.1e-08 63.9 148 24.3
FAN24G0751 Fragaria x ananassa HOM05D000176 ORTHO05D002183 1.1e-08 63.9 142 26.1
CSS0001401 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 1.5e-08 63.5 144 29.2
CSS0007507 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.5e-08 63.5 145 30.3
PSO017G5879 Papaver somniferum HOM05D000176 ORTHO05D000106 1.5e-08 63.5 148 25.7
Ca_06560_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.9e-08 63.2 109 36.7
Lj8C128T7 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-08 63.2 79 41.8
Ca_12206_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.5e-08 62.8 86 39.5
Lj1A491T22 Lonicera japonica HOM05D000176 ORTHO05D000106 3.3e-08 62.4 153 27.5
Lj5C702T0 Lonicera japonica HOM05D000176 ORTHO05D000106 3.3e-08 62.4 153 27.5
CSS0009167 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.3e-08 62.0 144 29.2
EL10Ac4g08651 Beta vulgaris HOM05D000176 ORTHO05D000106 5.6e-08 61.6 141 28.4
Lj5A265T32 Lonicera japonica HOM05D000176 ORTHO05D000106 7.3e-08 61.2 151 27.2
Lj8C418G4 Lonicera japonica HOM05D000176 ORTHO05D000106 7.3e-08 61.2 152 27.0
EL10Ac3g06558 Beta vulgaris HOM05D000176 ORTHO05D000106 1.2e-07 60.5 141 28.4
EL10Ac4g08649 Beta vulgaris HOM05D000176 ORTHO05D000106 1.2e-07 60.5 141 27.7
EL10Ac5g11245 Beta vulgaris HOM05D000176 ORTHO05D000106 1.2e-07 60.5 104 35.6
Ca_13090_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.2e-07 60.5 128 29.7
EL10Ac9g21153 Beta vulgaris HOM05D000176 ORTHO05D000106 1.6e-07 60.1 141 27.0
Ca_01641_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.6e-07 60.1 69 42.0
Ca_05087_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.6e-07 60.1 88 35.2
Hma1.2p1_1995F.1_g310310 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 1.6e-07 60.1 146 26.7
Lj5C240T11 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-07 59.7 142 31.7
Lj6C562T7 Lonicera japonica HOM05D000176 ORTHO05D000106 2.8e-07 59.3 143 28.0
Ca_14656_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.6e-07 58.9 78 43.6
Ca_22969_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 4.7e-07 58.5 70 41.4
Ca_27088_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.7e-07 58.5 73 39.7
Lj2A866T16 Lonicera japonica HOM05D000176 ORTHO05D000106 4.7e-07 58.5 152 25.7
EL10Ac9g20755 Beta vulgaris HOM05D000176 ORTHO05D000106 6.2e-07 58.2 104 34.6
Lju188C3T12 Lonicera japonica HOM05D000176 ORTHO05D000106 6.2e-07 58.2 85 36.5
EL10Ac1g00132 Beta vulgaris HOM05D000176 ORTHO05D000106 1.1e-06 57.4 93 35.5
EL10Ac7g17693 Beta vulgaris HOM05D000176 ORTHO05D000106 1.1e-06 57.4 93 35.5
EL10Ac8g19525 Beta vulgaris HOM05D000176 ORTHO05D000106 1.1e-06 57.4 93 35.5
EL10Ac8g20250 Beta vulgaris HOM05D000176 ORTHO05D000106 1.1e-06 57.4 93 35.5
EL10As6g23633 Beta vulgaris HOM05D000176 ORTHO05D000106 1.1e-06 57.4 85 35.3
Ca_05310_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.1e-06 57.4 78 38.5
vmacro12437 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 1.1e-06 57.4 91 36.3
EL10As7g23796 Beta vulgaris HOM05D000176 ORTHO05D000106 1.4e-06 57.0 93 35.5
Lj2C466G13 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-06 57.0 149 27.5
EL10Ac7g17812 Beta vulgaris HOM05D000176 ORTHO05D000106 1.8e-06 56.6 85 35.3
Ca_16679_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.8e-06 56.6 83 31.3
Ca_31358_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.8e-06 56.6 67 40.3
Lj3C888T3 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-06 56.6 120 33.3
arahy.Tifrunner.gnm1.ann1.6TXF5J Arachis hypogaea HOM05D000176 ORTHO05D000106 2.4e-06 56.2 95 36.8
arahy.Tifrunner.gnm1.ann1.PINR01 Arachis hypogaea HOM05D000176 ORTHO05D000106 2.4e-06 56.2 95 36.8
Ca_02558_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.4e-06 56.2 72 41.7
Ca_04892_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.4e-06 56.2 76 35.5
Ca_07725_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.4e-06 56.2 93 30.1
Ca_14586_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 3.1e-06 55.8 52 42.3
Lj9C281T4 Lonicera japonica HOM05D000176 ORTHO05D000106 3.1e-06 55.8 113 32.7
Ah.01g016230 Amaranthus hybridus HOM05D000176 ORTHO05D000106 4.0e-06 55.5 145 28.3
Ah.01g016400 Amaranthus hybridus HOM05D000176 ORTHO05D000106 5.2e-06 55.1 145 28.3
Hma1.2p1_0913F.1_g236030 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 5.2e-06 55.1 146 26.7
EL10Ac4g08453 Beta vulgaris HOM05D000176 ORTHO05D000106 6.8e-06 54.7 92 35.9
EL10Ac4g08454 Beta vulgaris HOM05D000176 ORTHO05D000106 6.8e-06 54.7 92 35.9
CSS0002500 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.8e-06 54.7 92 35.9
CSS0014815 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.8e-06 54.7 92 35.9
Lj5C312G4 Lonicera japonica HOM05D000176 ORTHO05D000106 6.8e-06 54.7 124 29.0
PGR042G1331 Punica granatum HOM05D000176 ORTHO05D000106 6.8e-06 54.7 89 36.0
Ca_23365_v3 Cicer arietinum L. HOM05D000005 ORTHO05D000012 8.9e-06 54.3 40 65.0
Rhsim06G0121800 Rhododendron simsii HOM05D000176 ORTHO05D000106 8.9e-06 54.3 89 36.0
Sabra01G0157300 Salix brachista HOM05D000176 ORTHO05D000106 8.9e-06 54.3 137 25.5


User provided reference genes

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