Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_22436_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 2.9e-94 348.6 182 100.0
Medtr3g100630 Medicago truncatula HOM05D006274 ORTHO05D007782 3.3e-82 308.5 182 90.1
TPR.G26025 Trifolium pratense HOM05D006274 ORTHO05D007782 4.8e-81 304.7 185 88.1
Ca_15989_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 4.5e-79 298.1 152 100.0
Lj1g0015671 Lotus japonicus HOM05D006274 ORTHO05D007782 2.3e-75 285.8 190 83.2
Phvul.009G143300 Phaseolus vulgaris HOM05D006274 ORTHO05D007782 3.7e-73 278.5 181 84.5
Glyma.04G092700 Glycine max HOM05D006274 ORTHO05D007782 4.8e-73 278.1 179 84.9
VMungo1309G0647 Vigna mungo HOM05D006274 ORTHO05D007782 1.1e-72 276.9 181 84.0
Glyma.06G094500 Glycine max HOM05D006274 ORTHO05D007782 3.6e-68 261.9 171 81.3
Lalb_Chr08g0242401 Lupinus albus HOM05D006274 ORTHO05D007782 2.3e-67 259.2 180 78.9
Haze_22342 Corylus avellana HOM05D006274 ORTHO05D007782 3.4e-66 255.4 180 76.1
Cfa013698 Carpinus fangiana HOM05D006274 ORTHO05D007782 1.7e-65 253.1 180 75.6
TWI56G1401 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 2.8e-65 252.3 191 72.8
TAR381G0542 Trochodendron aralioides HOM05D006274 ORTHO05D007782 1.4e-64 250.0 177 76.8
Ciclev10002605m.g Citrus clementina HOM05D006274 ORTHO05D007782 1.6e-63 246.5 190 73.7
QL09p017221 Quercus lobata HOM05D006274 ORTHO05D007782 1.0e-62 243.8 193 72.0
SalBow6G3082 Salvia bowleyana HOM05D006274 ORTHO05D007782 6.6e-62 241.1 180 71.1
Thecc.08G068200 Theobroma cacao HOM05D006274 ORTHO05D007782 2.5e-61 239.2 192 69.3
CiPaw.07G167900 Carya illinoinensis HOM05D006274 ORTHO05D007782 3.3e-61 238.8 196 68.9
Migut.J00587 Erythranthe guttata HOM05D006274 ORTHO05D007782 4.7e-60 235.0 177 70.1
Potri.002G103700 Populus trichocarpa HOM05D006274 ORTHO05D007782 4.7e-60 235.0 196 68.4
Prupe.1G528000 Prunus persica HOM05D006274 ORTHO05D007782 4.7e-60 235.0 190 70.0
Duzib116G0317 Durio zibethinus HOM05D006274 ORTHO05D007782 8.0e-60 234.2 195 67.2
CSS0045542 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 4.0e-59 231.9 180 69.4
Oeu024592.1 Olea europaea HOM05D006274 ORTHO05D007782 5.2e-59 231.5 174 70.1
MSTRG.19530 Avicennia marina HOM05D006274 ORTHO05D007782 8.9e-59 230.7 180 68.9
CSS0028463 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 8.9e-59 230.7 180 68.3
Cc10_g15630 Coffea canephora HOM05D006274 ORTHO05D007782 8.9e-59 230.7 180 68.9
MBI02_g18284_MAGBIO Magnolia biondii HOM05D006274 ORTHO05D007782 8.9e-59 230.7 191 67.0
ECA232G3909 Erigeron canadensis HOM05D006274 ORTHO05D007782 1.5e-58 229.9 169 72.2
MD15G1382000 Malus domestica HOM05D006274 ORTHO05D007782 1.5e-58 229.9 182 68.1
Hund27007 Selenicereus undatus HOM05D006274 ORTHO05D007782 2.0e-58 229.6 189 67.7
C04p15430 Brassica napus HOM05D006274 ORTHO05D007782 2.6e-58 229.2 185 70.3
Lsat_1_v5_gn_9_74940 Lactuca sativa HOM05D006274 ORTHO05D007782 2.6e-58 229.2 169 74.6
PGR031G0701 Punica granatum HOM05D006274 ORTHO05D007782 2.6e-58 229.2 192 68.2
BolC4t23114H Brassica oleracea HOM05D006274 ORTHO05D007782 7.5e-58 227.6 186 69.4
MD08G1193500 Malus domestica HOM05D006274 ORTHO05D007782 7.5e-58 227.6 182 67.6
Aa31LG9G13640 Aethionema arabicum HOM05D006274 ORTHO05D007782 9.8e-58 227.3 188 68.1
PSO210G3104 Papaver somniferum HOM05D006274 ORTHO05D007782 9.8e-58 227.3 171 74.3
GSVIVG01009140001 Vitis vinifera HOM05D006274 ORTHO05D007782 9.8e-58 227.3 164 75.6
Actinidia19642 Actinidia chinensis HOM05D006274 ORTHO05D007782 1.3e-57 226.9 195 66.2
BcaC02g11449 Brassica carinata HOM05D006274 ORTHO05D007782 1.7e-57 226.5 192 69.8
BcaB02g10587 Brassica carinata HOM05D006274 ORTHO05D007782 3.7e-57 225.3 184 69.6
A05p11860 Brassica napus HOM05D006274 ORTHO05D007782 4.9e-57 224.9 186 68.3
Hma1.2p1_0010F.1_g006970 Hydrangea macrophylla HOM05D006274 ORTHO05D007782 1.1e-56 223.8 188 66.5
THA.LOC104814210 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 1.1e-56 223.8 196 66.3
Sed0009042 Sechium edule HOM05D006274 ORTHO05D007782 1.8e-56 223.0 174 69.0
BraA05t20127Z Brassica rapa HOM05D006274 ORTHO05D007782 2.4e-56 222.6 185 68.6
HanXRQChr09g0249401 Helianthus annuus HOM05D006274 ORTHO05D007782 2.4e-56 222.6 171 72.5
Manes.18G061000 Manihot esculenta HOM05D006274 ORTHO05D007782 4.1e-56 221.9 187 66.8
SGA_v2.0_scaffold10G05208 Striga asiatica HOM05D006274 ORTHO05D007782 4.1e-56 221.9 180 66.7
Dinv44839 Davidia involucrata HOM05D006274 ORTHO05D007782 5.4e-56 221.5 194 67.0
Thhalv10017289m.g Eutrema salsugineum HOM05D006274 ORTHO05D007782 7.0e-56 221.1 185 67.6
Gohir.D06G032400 Gossypium hirsutum HOM05D006274 ORTHO05D007782 1.6e-55 219.9 195 64.6
Sopen00g007030 Solanum pennellii HOM05D006274 ORTHO05D007782 1.6e-55 219.9 179 65.9
Sopen00g007710 Solanum pennellii HOM05D006274 ORTHO05D007782 1.6e-55 219.9 179 65.9
PSO170G6492 Papaver somniferum HOM05D006274 ORTHO05D007782 2.0e-55 219.5 176 71.0
Solyc04g076050.4 Solanum lycopersicum HOM05D006274 ORTHO05D007782 4.6e-55 218.4 178 65.2
Gorai.010G035700 Gossypium raimondii HOM05D006274 ORTHO05D007782 7.8e-55 217.6 195 64.1
PGSC0003DMG400012912 Solanum tuberosum HOM05D006274 ORTHO05D007782 1.3e-54 216.9 182 64.3
Aqoxy5G01327 Aquilegia oxysepala HOM05D006274 ORTHO05D007782 1.7e-54 216.5 175 67.4
FvH4_5g35790 Fragaria vesca HOM05D006274 ORTHO05D007782 2.3e-54 216.1 181 66.9
RcHm_v2.0_Chr7g0237451 Rosa chinensis HOM05D006274 ORTHO05D007782 2.3e-54 216.1 187 64.7
FAN04G0860 Fragaria x ananassa HOM05D006274 ORTHO05D007782 3.0e-54 215.7 181 65.7
THA.LOC104820685 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 3.9e-54 215.3 192 64.1
unitig_26.g9169 Utricularia gibba HOM05D006274 ORTHO05D007782 5.0e-54 214.9 173 68.2
Carub.0004s1538 Capsella rubella HOM05D006274 ORTHO05D007782 6.6e-54 214.5 188 67.0
CARHR127760 Cardamine hirsuta HOM05D006274 ORTHO05D007782 6.6e-54 214.5 191 66.0
FAN18G0017 Fragaria x ananassa HOM05D006274 ORTHO05D007782 6.6e-54 214.5 181 66.3
Nn5g29933 Nelumbo nucifera HOM05D006274 ORTHO05D007782 8.6e-54 214.2 191 63.9
EL10Ac1g01111 Beta vulgaris HOM05D006274 ORTHO05D007782 1.5e-53 213.4 192 64.6
CsaV3_2G030110 Cucumis sativus L. HOM05D006274 ORTHO05D007782 1.5e-53 213.4 188 63.3
Sp4g16090 Schrenkiella parvula HOM05D006274 ORTHO05D007782 1.5e-53 213.4 187 67.4
AL4G29430 Arabidopsis lyrata HOM05D006274 ORTHO05D007782 2.5e-53 212.6 190 66.8
Eucgr.F02129 Eucalyptus grandis HOM05D006274 ORTHO05D007782 4.3e-53 211.8 182 63.2
vmacro04670 Vaccinium macrocarpon HOM05D006274 ORTHO05D007782 5.6e-53 211.5 202 62.9
AT2G33740 Arabidopsis thaliana HOM05D006274 ORTHO05D007782 7.3e-53 211.1 192 66.7
Sc01g0001050 Simmondsia chinensis HOM05D006274 ORTHO05D007782 7.3e-53 211.1 191 60.7
ClCG08G011520 Citrullus lanatus HOM05D006274 ORTHO05D007782 1.0e-51 207.2 209 57.9
arahy.Tifrunner.gnm1.ann1.44X20L Arachis hypogaea HOM05D006274 ORTHO05D007782 1.8e-51 206.5 152 76.3
Sabra02G0081200 Salix brachista HOM05D006274 ORTHO05D007782 1.8e-51 206.5 230 54.3
TWI12G0161 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 2.3e-51 206.1 131 80.2
arahy.Tifrunner.gnm1.ann1.SMA5HD Arachis hypogaea HOM05D006274 ORTHO05D007782 4.0e-51 205.3 140 78.6
Nitab4.5_0010618g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 4.0e-51 205.3 178 65.7
Dinv42635 Davidia involucrata HOM05D006274 ORTHO05D007782 1.2e-50 203.8 183 66.1
Nn1g05513 Nelumbo nucifera HOM05D006274 ORTHO05D007782 2.6e-50 202.6 183 63.9
ATR0022G028 Amborella trichopoda HOM05D006274 ORTHO05D007782 7.5e-50 201.1 190 62.6
Peaxi162Scf00281g00415 Petunia axillaris HOM05D006274 ORTHO05D007782 1.3e-49 200.3 167 64.7
CDE10G0432 Ceratophyllum demersum HOM05D006274 ORTHO05D007782 3.7e-49 198.7 186 60.8
Zm00001eb006540 Zea mays HOM05D006274 ORTHO05D007782 4.1e-48 195.3 165 63.0
Os10g0378300 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 5.4e-48 194.9 110 86.4
Gohir.A06G032628 Gossypium hirsutum HOM05D006274 ORTHO05D007782 7.0e-48 194.5 171 63.2
Hund16871 Selenicereus undatus HOM05D006274 ORTHO05D007782 1.6e-47 193.4 189 60.8
Os03g0186950 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 2.7e-47 192.6 138 73.2
MELO3C011069.2 Cucumis melo HOM05D006274 ORTHO05D007782 3.5e-47 192.2 206 56.8
Cpa.g.sc309.7 Carica papaya HOM05D006274 ORTHO05D007782 7.8e-47 191.0 191 60.2
Gohir.A05G218200 Gossypium hirsutum HOM05D006274 ORTHO05D007782 7.8e-47 191.0 194 59.3
MSTRG.6044 Avicennia marina HOM05D006274 ORTHO05D007782 1.0e-46 190.7 111 82.9
DCAR_012863 Daucus carota HOM05D006274 ORTHO05D007782 1.7e-46 189.9 110 83.6
AUR62019013 Chenopodium quinoa HOM05D006274 ORTHO05D007782 5.0e-46 188.3 109 83.5
Psat5g045880 Pisum sativum HOM05D006274 ORTHO05D007782 5.0e-46 188.3 144 75.7
Gorai.009G231100 Gossypium raimondii HOM05D006274 ORTHO05D007782 6.6e-46 188.0 185 59.5
AUR62027854 Chenopodium quinoa HOM05D006274 ORTHO05D007782 1.5e-45 186.8 109 81.7
Sopen00g004300 Solanum pennellii HOM05D006274 ORTHO05D007782 7.3e-45 184.5 105 83.8
Ah.01g021840 Amaranthus hybridus HOM05D003995 ORTHO05D004800 3.4e-42 175.6 139 65.5
Nitab4.5_0001507g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 3.4e-42 175.6 184 57.6
Actinidia29612 Actinidia chinensis HOM05D006274 ORTHO05D007782 4.4e-42 175.3 173 60.1
CAN.G1658.2 Capsicum annuum HOM05D006274 ORTHO05D007782 7.5e-42 174.5 115 75.7
Gohir.D05G223833 Gossypium hirsutum HOM05D006274 ORTHO05D007782 2.3e-38 162.9 185 55.1
FAN13G2708 Fragaria x ananassa HOM05D006274 ORTHO05D007782 9.5e-37 157.5 92 81.5
FAN08G3216 Fragaria x ananassa HOM05D006274 ORTHO05D007782 8.1e-36 154.5 92 80.4
Atru.chr13.1045 Acer truncatum HOM05D006274 ORTHO05D007782 4.0e-35 152.1 100 79.0
SMO119G0339 Selaginella moellendorffii HOM05D006274 ORTHO05D007782 5.2e-35 151.8 103 68.9
HPP92_002219 Vanilla planifolia HOM05D006274 ORTHO05D007782 1.5e-34 150.2 88 81.8
Mapoly0011s0077 Marchantia polymorpha HOM05D006274 ORTHO05D007782 1.7e-33 146.7 137 55.5
Sed0010188 Sechium edule HOM05D006274 ORTHO05D007782 1.4e-32 143.7 92 77.2
SEGI_33866 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 6.6e-30 134.8 100 62.0
CANSAT64G0910 Cannabis sativa HOM05D006274 ORTHO05D007782 1.1e-29 134.0 128 62.5
SEGI_16140 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 1.1e-29 134.0 90 72.2
CBR_g39263 Chara braunii HOM05D002374 ORTHO05D003594 7.3e-29 131.3 101 60.4
Cre02.g082350 Chlamydomonas reinhardtii HOM05D006274 ORTHO05D007782 2.4e-27 126.3 99 59.6
PRCOL_00002052 Prasinoderma coloniale HOM05D006274 ORTHO05D007782 3.1e-27 125.9 97 59.8
Rhsim07G0210300 Rhododendron simsii HOM05D006274 ORTHO05D007782 4.0e-27 125.6 70 82.9
EL10Ac9g22466 Beta vulgaris HOM05D006274 ORTHO05D007782 1.4e-24 117.1 70 75.7
AagrBONN_evm.TU.Sc2ySwM_228.3755 Anthoceros agrestis HOM05D006274 ORTHO05D007782 2.4e-24 116.3 81 69.1
Pp3c21_2600 Physcomitrium patens HOM05D006274 ORTHO05D007782 3.5e-23 112.5 103 54.4
CBR_g7959 Chara braunii HOM05D006274 ORTHO05D007782 1.4e-19 100.5 92 57.6
Medtr4g010890 Medicago truncatula HOM05D006274 ORTHO05D007782 9.0e-11 71.2 55 80.0
Ca_28793_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 2.4e-08 63.2 85 35.3


User provided reference genes

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