Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_22347_v3 Cicer arietinum L. HOM05D007510 ORTHO05D009587 1.6e-42 176.0 114 100.0
TPR.G21530 Trifolium pratense HOM05D007510 ORTHO05D009587 1.3e-28 129.8 113 58.4
Psat4g096640 Pisum sativum HOM05D007510 ORTHO05D009587 1.7e-28 129.4 112 57.1
Glyma.02G052200 Glycine max HOM05D007510 ORTHO05D009587 7.8e-21 104.0 107 54.2
VMungo0251G3154 Vigna mungo HOM05D007510 ORTHO05D009587 1.3e-20 103.2 118 48.3
Phvul.003G257700 Phaseolus vulgaris HOM05D007510 ORTHO05D009587 1.5e-19 99.8 121 49.6
Lj4g0024164 Lotus japonicus HOM05D007510 ORTHO05D009587 2.5e-19 99.0 112 46.4
Medtr8g076660 Medicago truncatula HOM05D007510 ORTHO05D009587 5.8e-16 87.8 43 88.4
Lalb_Chr05g0229951 Lupinus albus HOM05D007510 ORTHO05D009587 7.6e-16 87.4 115 45.2
arahy.Tifrunner.gnm1.ann1.X6BQPF Arachis hypogaea HOM05D007510 ORTHO05D009587 2.9e-15 85.5 113 44.2
TWI09G1276 Tripterygium wilfordii HOM05D007510 ORTHO05D009587 3.8e-15 85.1 41 85.4
MD02G1136700 Malus domestica HOM05D007510 ORTHO05D000703 1.9e-14 82.8 35 91.4
Prupe.7G163800 Prunus persica HOM05D007510 ORTHO05D000703 7.1e-14 80.9 34 91.2
FAN28G2971 Fragaria x ananassa HOM05D007510 ORTHO05D009587 9.3e-14 80.5 33 93.9
QL06p034549 Quercus lobata HOM05D007510 ORTHO05D009587 1.2e-13 80.1 111 52.3
Atru.chr3.749 Acer truncatum HOM05D007510 ORTHO05D009587 1.6e-13 79.7 42 78.6
Cpa.g.sc6.200 Carica papaya HOM05D007510 ORTHO05D009587 1.6e-13 79.7 41 78.0
Gohir.A02G168700 Gossypium hirsutum HOM05D007510 ORTHO05D009587 1.6e-13 79.7 41 78.0
Gohir.D03G011300 Gossypium hirsutum HOM05D007510 ORTHO05D009587 1.6e-13 79.7 41 78.0
Gorai.003G011700 Gossypium raimondii HOM05D007510 ORTHO05D009587 1.6e-13 79.7 41 78.0
BcaNung00409 Brassica carinata HOM05D007510 ORTHO05D009587 3.5e-13 78.6 37 83.8
Potri.007G017200 Populus trichocarpa HOM05D007510 ORTHO05D009587 4.6e-13 78.2 33 90.9
CANSAT01G2887 Cannabis sativa HOM05D007510 ORTHO05D009587 6.0e-13 77.8 33 90.9
CANSAT78G1864 Cannabis sativa HOM05D007510 ORTHO05D009587 6.0e-13 77.8 33 90.9
MELO3C007880.2 Cucumis melo HOM05D007510 ORTHO05D009587 6.0e-13 77.8 42 76.2
Sp6g26950 Schrenkiella parvula HOM05D007510 ORTHO05D009587 6.0e-13 77.8 42 78.6
SGA_v2.0_scaffold280G46849 Striga asiatica HOM05D007510 ORTHO05D009587 6.0e-13 77.8 33 93.9
Thecc.01G024800 Theobroma cacao HOM05D007510 ORTHO05D009587 6.0e-13 77.8 42 76.2
Duzib264G0517 Durio zibethinus HOM05D007510 ORTHO05D009587 7.9e-13 77.4 38 78.9
Ciclev10026716m.g Citrus clementina HOM05D007510 ORTHO05D009587 1.0e-12 77.0 41 75.6
A10p22120 Brassica napus HOM05D007510 ORTHO05D009587 1.3e-12 76.6 33 90.9
BraA10t44271Z Brassica rapa HOM05D007510 ORTHO05D009587 1.3e-12 76.6 33 90.9
HanXRQChr11g0325681 Helianthus annuus HOM05D007510 ORTHO05D009587 1.3e-12 76.6 35 88.6
Migut.H02491 Erythranthe guttata HOM05D007510 ORTHO05D009587 1.8e-12 76.3 33 93.9
CSS0038414 Camellia sinensis var. sinensis HOM05D007510 ORTHO05D009587 2.3e-12 75.9 41 73.2
COL.COLO4_21980 Corchorus olitorius HOM05D001094 ORTHO05D001050 2.3e-12 75.9 41 75.6
CsaV3_6G046830 Cucumis sativus L. HOM05D007510 ORTHO05D009587 2.3e-12 75.9 39 76.9
ECA232G0818 Erigeron canadensis HOM05D001094 ORTHO05D001050 2.3e-12 75.9 33 87.9
Lsat_1_v5_gn_4_151140 Lactuca sativa HOM05D007510 ORTHO05D009587 2.3e-12 75.9 33 90.9
CAN.G358.14 Capsicum annuum HOM05D007510 ORTHO05D009587 3.0e-12 75.5 41 78.0
Cfa006928 Carpinus fangiana HOM05D007510 ORTHO05D009587 3.0e-12 75.5 41 78.0
BcaC03g18546 Brassica carinata HOM05D007510 ORTHO05D009587 3.9e-12 75.1 41 75.6
Manes.02G175500 Manihot esculenta HOM05D007510 ORTHO05D009587 3.9e-12 75.1 40 77.5
unitig_27.g25318 Utricularia gibba HOM05D007510 ORTHO05D009587 3.9e-12 75.1 33 87.9
Oeu037724.1 Olea europaea HOM05D007510 ORTHO05D009587 5.1e-12 74.7 32 90.6
Oeu037725.1 Olea europaea HOM05D007510 ORTHO05D009587 5.1e-12 74.7 32 90.6
A02p04090 Brassica napus HOM05D007510 ORTHO05D009587 6.7e-12 74.3 41 75.6
BraA02t05372Z Brassica rapa HOM05D007510 ORTHO05D009587 6.7e-12 74.3 41 75.6
ClCG01G020060 Citrullus lanatus HOM05D007510 ORTHO05D000703 6.7e-12 74.3 35 82.9
Hma1.2p1_0266F.1_g107010 Hydrangea macrophylla HOM05D007510 ORTHO05D009587 6.7e-12 74.3 33 87.9
Aa31LG11G5850 Aethionema arabicum HOM05D007510 ORTHO05D009587 8.7e-12 73.9 41 73.2
AT5G17280 Arabidopsis thaliana HOM05D007510 ORTHO05D009587 8.7e-12 73.9 30 93.3
C02p08940 Brassica napus HOM05D007510 ORTHO05D009587 8.7e-12 73.9 31 93.5
BolC2t06803H Brassica oleracea HOM05D007510 ORTHO05D009587 8.7e-12 73.9 31 93.5
Solyc02g084650.3 Solanum lycopersicum HOM05D007510 ORTHO05D009587 8.7e-12 73.9 33 87.9
Sopen02g029320 Solanum pennellii HOM05D007510 ORTHO05D009587 8.7e-12 73.9 33 87.9
PGSC0003DMG400003618 Solanum tuberosum HOM05D007510 ORTHO05D009587 8.7e-12 73.9 33 87.9
BcaC04g18811 Brassica carinata HOM05D007510 ORTHO05D009587 1.1e-11 73.6 33 87.9
C09p59910 Brassica napus HOM05D007510 ORTHO05D009587 1.1e-11 73.6 33 87.9
BolC9t58827H Brassica oleracea HOM05D007510 ORTHO05D009587 1.1e-11 73.6 33 87.9
FvH4_1g12420 Fragaria vesca HOM05D000116 ORTHO05D000703 1.1e-11 73.6 30 93.3
FAN26G1275 Fragaria x ananassa HOM05D007510 ORTHO05D009587 1.1e-11 73.6 30 93.3
HanXRQChr15g0494821 Helianthus annuus HOM05D007510 ORTHO05D009587 1.1e-11 73.6 35 85.7
SalBow5G2055 Salvia bowleyana HOM05D007510 ORTHO05D009587 1.1e-11 73.6 33 87.9
CARHR195940 Cardamine hirsuta HOM05D007510 ORTHO05D009587 1.5e-11 73.2 29 96.6
BcaB08g36792 Brassica carinata HOM05D007510 ORTHO05D009587 1.9e-11 72.8 33 84.8
Nitab4.5_0002266g0030 Nicotiana tabacum HOM05D007510 ORTHO05D009587 1.9e-11 72.8 33 84.8
Aa31LG1G14840 Aethionema arabicum HOM05D007510 ORTHO05D009587 2.5e-11 72.4 31 87.1
Ah.02g124790 Amaranthus hybridus HOM05D007510 ORTHO05D009587 2.5e-11 72.4 34 82.4
AL6G28360 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 2.5e-11 72.4 30 90.0
Nitab4.5_0012525g0020 Nicotiana tabacum HOM05D007510 ORTHO05D009587 2.5e-11 72.4 33 84.8
EL10As8g23866 Beta vulgaris HOM05D007510 ORTHO05D009587 3.3e-11 72.0 41 65.9
Rhsim08G0036700 Rhododendron simsii HOM05D007510 ORTHO05D009587 3.3e-11 72.0 34 79.4
vmacro22104 Vaccinium macrocarpon HOM05D007510 ORTHO05D009587 3.3e-11 72.0 34 79.4
Nn6g32199 Nelumbo nucifera HOM05D007510 ORTHO05D009587 4.3e-11 71.6 41 73.2
Sed0019199 Sechium edule HOM05D007510 ORTHO05D009587 5.6e-11 71.2 39 74.4
Haze_03821 Corylus avellana HOM05D007510 ORTHO05D009587 7.4e-11 70.9 31 87.1
Thhalv10014934m.g Eutrema salsugineum HOM05D007510 ORTHO05D009587 7.4e-11 70.9 31 83.9
Carub.0006s1547 Capsella rubella HOM05D007510 ORTHO05D009587 9.6e-11 70.5 29 89.7
CiPaw.08G136300 Carya illinoinensis HOM05D007510 ORTHO05D009587 9.6e-11 70.5 41 75.6
AUR62007639 Chenopodium quinoa HOM05D007510 ORTHO05D009587 9.6e-11 70.5 39 69.2
TAR625G1319 Trochodendron aralioides HOM05D007510 ORTHO05D009587 9.6e-11 70.5 41 70.7
Actinidia26112 Actinidia chinensis HOM05D007510 ORTHO05D009587 1.3e-10 70.1 30 90.0
Sc16g0002400 Simmondsia chinensis HOM05D007510 ORTHO05D009587 1.3e-10 70.1 42 69.0
Os09g0530900 Oryza sativa ssp. japonica HOM05D007510 ORTHO05D009587 2.1e-10 69.3 30 90.0
CiPaw.04G025800 Carya illinoinensis HOM05D007510 ORTHO05D009587 3.6e-10 68.6 33 81.8
Sc03g0003350 Simmondsia chinensis HOM05D007510 ORTHO05D009587 6.2e-10 67.8 36 75.0
Aqoxy1G00866 Aquilegia oxysepala HOM05D007510 ORTHO05D009587 1.1e-09 67.0 29 86.2
CDE12G0095 Ceratophyllum demersum HOM05D007510 ORTHO05D009587 1.8e-09 66.2 42 69.0
SHI08591 Sapria himalayana HOM05D007510 ORTHO05D009587 2.4e-09 65.9 33 72.7
SEGI_27269 Sequoiadendron giganteum HOM05D007510 ORTHO05D009587 2.4e-09 65.9 30 83.3
ATR0661G079 Amborella trichopoda HOM05D007510 ORTHO05D009587 3.1e-09 65.5 32 71.9
Nn5g29177 Nelumbo nucifera HOM05D007510 ORTHO05D009587 3.1e-09 65.5 34 70.6
HPP92_022284 Vanilla planifolia HOM05D007510 ORTHO05D009587 4.0e-09 65.1 42 61.9
HPP92_022401 Vanilla planifolia HOM05D007510 ORTHO05D009587 4.0e-09 65.1 42 61.9
HPP92_028382 Vanilla planifolia HOM05D007510 ORTHO05D009587 4.0e-09 65.1 42 61.9
CDE04G3692 Ceratophyllum demersum HOM05D001179 ORTHO05D002194 5.3e-09 64.7 30 83.3
Zm00001eb319510 Zea mays HOM05D007510 ORTHO05D009587 1.5e-08 63.2 29 79.3
PGR102G2493 Punica granatum HOM05D007510 ORTHO05D009587 2.0e-08 62.8 37 64.9
Mapoly0025s0056 Marchantia polymorpha HOM05D007510 ORTHO05D009587 2.2e-07 59.3 34 61.8
AagrBONN_evm.TU.Sc2ySwM_228.2268 Anthoceros agrestis HOM05D007510 ORTHO05D009587 2.9e-07 58.9 30 73.3
AagrBONN_evm.TU.Sc2ySwM_368.2258 Anthoceros agrestis HOM05D007510 ORTHO05D009587 2.9e-07 58.9 30 73.3
AL6G28340 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 3.2e-06 55.5 35 65.7
Pp3c10_3490 Physcomitrium patens HOM05D007510 ORTHO05D009587 9.3e-06 53.9 28 71.4


User provided reference genes

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