Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_22340_v3 Cicer arietinum L. HOM05D006531 ORTHO05D007905 0.0e+00 1164.8 565 100.0
Psat4g096120 Pisum sativum HOM05D006531 ORTHO05D007905 5.4e-256 887.5 568 76.9
TPR.G21544 Trifolium pratense HOM05D006531 ORTHO05D007905 2.1e-255 885.6 563 78.5
Medtr8g076860 Medicago truncatula HOM05D006531 ORTHO05D007905 8.1e-252 873.6 567 77.2
Lj4g0004916 Lotus japonicus HOM05D006531 ORTHO05D007905 9.4e-200 700.7 570 64.9
Glyma.02G053000 Glycine max HOM05D006531 ORTHO05D007905 7.4e-197 691.0 566 62.4
Lalb_Chr16g0391021 Lupinus albus HOM05D006531 ORTHO05D007905 1.0e-193 680.6 581 59.9
VMungo0251G0240 Vigna mungo HOM05D006531 ORTHO05D007905 1.8e-190 669.8 563 59.7
arahy.Tifrunner.gnm1.ann1.WDDE23 Arachis hypogaea HOM05D006531 ORTHO05D007905 2.2e-177 626.3 576 55.9
arahy.Tifrunner.gnm1.ann1.P54VLQ Arachis hypogaea HOM05D006531 ORTHO05D007905 7.2e-176 621.3 576 55.2
Haze_03846 Corylus avellana HOM05D006531 ORTHO05D007905 1.2e-143 514.2 575 49.6
QL06p035210 Quercus lobata HOM05D006531 ORTHO05D007905 1.6e-138 497.3 599 46.4
MD15G1254500 Malus domestica HOM05D006531 ORTHO05D007905 1.4e-134 484.2 584 44.9
Ciclev10025250m.g Citrus clementina HOM05D006531 ORTHO05D007905 1.8e-134 483.8 583 46.3
MELO3C007866.2 Cucumis melo HOM05D006531 ORTHO05D007905 3.1e-134 483.0 583 46.0
RcHm_v2.0_Chr2g0100811 Rosa chinensis HOM05D006531 ORTHO05D007905 6.9e-134 481.9 569 45.5
CsaV3_6G046680 Cucumis sativus L. HOM05D006531 ORTHO05D007905 1.2e-133 481.1 583 46.1
GSVIVG01018883001 Vitis vinifera HOM05D006531 ORTHO05D007905 1.5e-133 480.7 564 45.7
Atru.chr3.665 Acer truncatum HOM05D006531 ORTHO05D007905 5.8e-133 478.8 583 45.8
TAR628G0973 Trochodendron aralioides HOM05D006531 ORTHO05D007905 1.3e-132 477.6 605 44.8
Actinidia35619 Actinidia chinensis HOM05D006531 ORTHO05D007905 8.4e-132 474.9 581 45.1
FAN19G3073 Fragaria x ananassa HOM05D006531 ORTHO05D007905 1.1e-131 474.6 575 45.0
FvH4_1g12740 Fragaria vesca HOM05D006531 ORTHO05D007905 4.2e-131 472.6 576 45.1
FAN26G0669 Fragaria x ananassa HOM05D006531 ORTHO05D007905 2.7e-130 469.9 576 44.4
Dinv05610 Davidia involucrata HOM05D006531 ORTHO05D007905 4.6e-130 469.2 561 44.4
FAN23G2909 Fragaria x ananassa HOM05D006531 ORTHO05D007905 6.0e-130 468.8 573 44.9
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 1.7e-129 467.2 602 43.9
vmacro17801 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 8.7e-129 464.9 599 43.4
Cpa.g.sc89.75 Carica papaya HOM05D006531 ORTHO05D007905 2.5e-128 463.4 587 44.3
FAN28G0612 Fragaria x ananassa HOM05D006531 ORTHO05D007905 9.6e-128 461.5 577 43.7
Gohir.D11G188400 Gossypium hirsutum HOM05D006531 ORTHO05D007905 1.3e-127 461.1 574 44.3
Gorai.007G200500 Gossypium raimondii HOM05D006531 ORTHO05D007905 1.6e-127 460.7 576 44.6
Thecc.01G028000 Theobroma cacao HOM05D006531 ORTHO05D007905 2.1e-127 460.3 573 45.2
Potri.007G019733 Populus trichocarpa HOM05D006531 ORTHO05D007905 2.8e-127 459.9 584 43.0
CANSAT21G1927 Cannabis sativa HOM05D006531 ORTHO05D007905 1.1e-126 458.0 565 43.5
Prupe.7G159100 Prunus persica HOM05D006531 ORTHO05D007905 1.4e-126 457.6 519 47.0
Duzib187G1823 Durio zibethinus HOM05D006531 ORTHO05D007905 4.0e-126 456.1 572 45.6
TWI53G1729 Tripterygium wilfordii HOM05D006531 ORTHO05D007905 1.2e-125 454.5 573 44.9
Potri.007G019800 Populus trichocarpa HOM05D006531 ORTHO05D007905 4.5e-125 452.6 585 42.4
COL.COLO4_22012 Corchorus olitorius HOM05D006531 ORTHO05D007905 4.2e-123 446.0 573 44.3
Rhsim08G0121800 Rhododendron simsii HOM05D006531 ORTHO05D007905 2.3e-121 440.3 564 44.0
Eucgr.J02379 Eucalyptus grandis HOM05D006531 ORTHO05D007905 2.5e-120 436.8 564 42.7
Atru.BG.101.p Acer truncatum HOM05D006531 ORTHO05D007905 4.8e-119 432.6 558 43.7
DCAR_001553 Daucus carota HOM05D006531 ORTHO05D007905 4.5e-117 426.0 565 42.1
Cc07_g10020 Coffea canephora HOM05D006531 ORTHO05D007905 1.1e-115 421.4 563 42.3
MSTRG.23258 Avicennia marina HOM05D006531 ORTHO05D007905 4.2e-115 419.5 571 41.9
EL10As8g23896 Beta vulgaris HOM05D006531 ORTHO05D007905 1.2e-114 417.9 583 41.7
Gohir.D11G322533 Gossypium hirsutum HOM05D006531 ORTHO05D007905 3.5e-114 416.4 570 42.6
Migut.H02514 Erythranthe guttata HOM05D006531 ORTHO05D007905 1.0e-113 414.8 571 42.0
PGSC0003DMG400022568 Solanum tuberosum HOM05D006531 ORTHO05D007905 5.1e-113 412.5 567 41.8
Aqoxy6G01185 Aquilegia oxysepala HOM05D006531 ORTHO05D007905 8.7e-113 411.8 605 40.0
Oeu056763.1 Olea europaea HOM05D006531 ORTHO05D007905 1.9e-112 410.6 583 42.0
Sabra07G0016900 Salix brachista HOM05D006531 ORTHO05D007905 2.5e-112 410.2 526 43.3
Solyc03g033720.4 Solanum lycopersicum HOM05D006531 ORTHO05D007905 3.3e-112 409.8 563 40.9
Sopen03g006510 Solanum pennellii HOM05D006531 ORTHO05D007905 3.3e-112 409.8 563 41.4
Hund14004 Selenicereus undatus HOM05D006531 ORTHO05D007905 1.6e-111 407.5 572 41.6
PSO675G3692 Papaver somniferum HOM05D006531 ORTHO05D007905 3.7e-111 406.4 594 40.6
PGR102G2490 Punica granatum HOM05D006531 ORTHO05D007905 2.4e-110 403.7 574 40.4
CARHR147820 Cardamine hirsuta HOM05D006531 ORTHO05D007905 5.3e-110 402.5 572 41.4
SalBow8G4669 Salvia bowleyana HOM05D006531 ORTHO05D007905 5.3e-110 402.5 579 41.5
CiPaw.07G051400 Carya illinoinensis HOM05D006531 ORTHO05D007905 1.5e-109 401.0 445 47.4
Sc07g0000880 Simmondsia chinensis HOM05D006531 ORTHO05D007905 1.5e-109 401.0 564 41.7
PSO541G5850 Papaver somniferum HOM05D006531 ORTHO05D007905 2.2e-108 397.1 581 41.0
Lsat_1_v5_gn_4_151921 Lactuca sativa HOM05D006531 ORTHO05D007905 3.8e-108 396.4 567 41.1
ECA232G0312 Erigeron canadensis HOM05D006531 ORTHO05D007905 4.9e-108 396.0 562 40.9
Ah.03g141200 Amaranthus hybridus HOM05D006531 ORTHO05D007905 8.4e-108 395.2 568 39.8
A06p41760 Brassica napus HOM05D006531 ORTHO05D007905 2.5e-107 393.7 557 40.6
BraA06t27096Z Brassica rapa HOM05D006531 ORTHO05D007905 2.5e-107 393.7 557 40.6
Nitab4.5_0011360g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 3.2e-107 393.3 577 39.0
CAN.G753.1 Capsicum annuum HOM05D006531 ORTHO05D007905 5.5e-107 392.5 564 39.7
AUR62004101 Chenopodium quinoa HOM05D006531 ORTHO05D007905 1.6e-106 391.0 572 40.6
AT3G26750 Arabidopsis thaliana HOM05D006531 ORTHO05D007905 2.7e-106 390.2 564 40.8
AUR62007614 Chenopodium quinoa HOM05D006531 ORTHO05D007905 1.3e-105 387.9 574 39.7
Thhalv10003992m.g Eutrema salsugineum HOM05D006531 ORTHO05D007905 6.7e-105 385.6 573 39.4
Sp2g15880 Schrenkiella parvula HOM05D006531 ORTHO05D007905 1.1e-104 384.8 570 40.2
Nitab4.5_0001289g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 4.8e-103 379.4 610 37.7
THA.LOC104819768 Tarenaya hassleriana HOM05D006531 ORTHO05D007905 6.3e-103 379.0 569 39.2
AL5G15610 Arabidopsis lyrata HOM05D006531 ORTHO05D007905 1.8e-102 377.5 564 40.8
BcaC06g31044 Brassica carinata HOM05D006531 ORTHO05D007905 5.3e-102 375.9 560 39.6
BcaC06g33892 Brassica carinata HOM05D006531 ORTHO05D007905 6.9e-102 375.6 563 38.9
BolC7t44097H Brassica oleracea HOM05D006531 ORTHO05D007905 2.6e-101 373.6 561 39.2
C07p35780 Brassica napus HOM05D006531 ORTHO05D007905 5.9e-101 372.5 560 39.1
Lj2C458T7 Lonicera japonica HOM05D006531 ORTHO05D007905 2.2e-100 370.5 444 45.5
Sed0004808 Sechium edule HOM05D006531 ORTHO05D007905 6.5e-100 369.0 420 46.0
Os02g0130900 Oryza sativa ssp. japonica HOM05D006531 ORTHO05D007905 2.5e-99 367.1 576 37.8
CDE04G2389 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 6.7e-97 359.0 591 37.1
Aa31LG2G5790 Aethionema arabicum HOM05D006531 ORTHO05D007905 2.5e-96 357.1 562 37.9
Manes.02G098000 Manihot esculenta HOM05D006531 ORTHO05D007905 9.7e-96 355.1 413 46.0
HanXRQChr09g0261281 Helianthus annuus HOM05D006531 ORTHO05D007905 2.2e-95 354.0 560 37.9
Phvul.003G257232 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 8.2e-95 352.1 245 67.3
Peaxi162Scf00010g00816 Petunia axillaris HOM05D006531 ORTHO05D007905 1.0e-92 345.1 552 38.9
Gohir.A11G181766 Gossypium hirsutum HOM05D006531 ORTHO05D007905 2.1e-90 337.4 411 44.8
ATR0585G072 Amborella trichopoda HOM05D006531 ORTHO05D007905 3.0e-89 333.6 586 36.0
Carub.0005s0479 Capsella rubella HOM05D006531 ORTHO05D007905 1.1e-86 325.1 439 41.2
MBI16_g36847_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 2.4e-86 323.9 446 42.2
unitig_0.g471 Utricularia gibba HOM05D006531 ORTHO05D007905 5.0e-84 316.2 563 34.3
HPP92_011628 Vanilla planifolia HOM05D006531 ORTHO05D007905 9.4e-83 312.0 505 36.4
Phvul.003G257166 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 3.9e-81 306.6 262 61.1
SGA_v2.0_scaffold12G06335 Striga asiatica HOM05D006531 ORTHO05D007905 6.7e-81 305.8 411 41.8
Hma1.2p1_3019F.1_g331750 Hydrangea macrophylla HOM05D006531 ORTHO05D007905 5.9e-77 292.7 360 44.2
Mapoly0011s0081 Marchantia polymorpha HOM05D006531 ORTHO05D007905 2.0e-56 224.6 651 28.0
Zm00001eb209020 Zea mays HOM05D006531 ORTHO05D007905 4.7e-50 203.4 509 28.7
MBI14_g29302_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 6.1e-50 203.0 191 51.8
Pp3c2_6980 Physcomitrium patens HOM05D006531 ORTHO05D007905 2.0e-48 198.0 611 27.7
AagrBONN_evm.TU.Sc2ySwM_368.1148 Anthoceros agrestis HOM05D006531 ORTHO05D007905 6.0e-37 159.8 449 26.1
CSS0007477 Camellia sinensis var. sinensis HOM05D006531 ORTHO05D007905 2.1e-34 151.4 134 53.7
TAR376G0004 Trochodendron aralioides HOM05D006531 ORTHO05D007905 2.3e-33 147.9 140 50.0
Lj2g0008134 Lotus japonicus HOM05D006531 ORTHO05D007905 1.5e-32 145.2 146 56.8
Nn5g29702 Nelumbo nucifera HOM05D006531 ORTHO05D007905 2.0e-32 144.8 140 50.0
Zm00001eb231290 Zea mays HOM05D006531 ORTHO05D007905 1.3e-31 142.1 189 39.7
vmacro23089 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 3.2e-30 137.5 130 48.5
Carub.0006s2991 Capsella rubella HOM05D006531 ORTHO05D007905 2.6e-24 117.9 117 46.2
SEGI_05601 Sequoiadendron giganteum HOM05D006531 ORTHO05D007905 4.7e-18 97.1 330 26.4
TAR376G0395 Trochodendron aralioides HOM05D006531 ORTHO05D007905 5.1e-12 77.0 119 39.5
Sc07g0000850 Simmondsia chinensis HOM05D006531 ORTHO05D007905 3.6e-10 70.9 74 44.6
TAR629G1149 Trochodendron aralioides HOM05D006531 ORTHO05D007905 2.0e-08 65.1 73 45.2
CBR_g8866 Chara braunii HOM05D006531 ORTHO05D007905 5.8e-08 63.5 79 31.6
Medtr3g062350 Medicago truncatula HOM05D006531 ORTHO05D007905 5.8e-08 63.5 36 75.0
RcHm_v2.0_Chr4g0390451 Rosa chinensis HOM05D006531 ORTHO05D007905 2.9e-07 61.2 42 61.9
MSTRG.2488 Avicennia marina HOM05D006531 ORTHO05D007905 2.4e-06 58.2 75 44.0


User provided reference genes

Program Settings