Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_22305_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 1.6e-216 755.7 376 100.0
Ca_30898_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 8.7e-85 318.2 376 51.9
Psat6g084240 Pisum sativum HOM05D007282 ORTHO05D009214 2.7e-49 200.3 369 40.4
Medtr1g059660 Medicago truncatula HOM05D007282 ORTHO05D009214 4.5e-49 199.5 380 39.5
TPR.G14774 Trifolium pratense HOM05D007282 ORTHO05D009214 2.2e-48 197.2 377 37.9
Glyma.02G201500 Glycine max HOM05D007282 ORTHO05D009214 6.3e-43 179.1 376 36.2
Lj5g0026678 Lotus japonicus HOM05D007282 ORTHO05D009214 5.9e-41 172.6 378 36.0
Glyma.10G075000 Glycine max HOM05D007282 ORTHO05D009214 2.9e-40 170.2 381 35.2
Lalb_Chr06g0172471 Lupinus albus HOM05D007282 ORTHO05D009214 8.8e-37 158.7 379 34.6
Phvul.007G163900 Phaseolus vulgaris HOM05D007282 ORTHO05D009214 4.9e-35 152.9 378 32.5
Oeu025665.1 Olea europaea HOM05D007282 ORTHO05D009214 1.1e-31 141.7 327 32.7
Sabra06G0161800 Salix brachista HOM05D007282 ORTHO05D009214 1.1e-31 141.7 380 32.1
Dinv21175 Davidia involucrata HOM05D007282 ORTHO05D009214 4.3e-31 139.8 379 30.9
Gohir.D09G133600 Gossypium hirsutum HOM05D007282 ORTHO05D009214 9.5e-31 138.7 321 32.7
Hma1.2p1_0769F.1_g215750 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 1.2e-30 138.3 382 31.9
Gorai.006G153100 Gossypium raimondii HOM05D007282 ORTHO05D009214 1.6e-30 137.9 321 32.4
PGR142G4217 Punica granatum HOM05D007282 ORTHO05D009214 2.1e-30 137.5 322 32.9
Gohir.A09G141100 Gossypium hirsutum HOM05D007282 ORTHO05D009214 8.0e-30 135.6 321 32.4
QL07p038317 Quercus lobata HOM05D007282 ORTHO05D009214 8.0e-30 135.6 320 32.5
Atru.chr8.1455 Acer truncatum HOM05D007282 ORTHO05D009214 1.0e-29 135.2 334 33.5
Nn6g34828 Nelumbo nucifera HOM05D007282 ORTHO05D009214 1.0e-29 135.2 322 32.3
CiPaw.09G016500 Carya illinoinensis HOM05D007282 ORTHO05D009214 1.4e-29 134.8 330 32.1
Migut.J01006 Erythranthe guttata HOM05D007282 ORTHO05D009214 3.0e-29 133.7 388 28.4
Potri.006G210000 Populus trichocarpa HOM05D007282 ORTHO05D009214 3.0e-29 133.7 389 30.3
TAR623G0904 Trochodendron aralioides HOM05D007282 ORTHO05D009214 4.0e-29 133.3 323 31.6
Thecc.05G094100 Theobroma cacao HOM05D007282 ORTHO05D009214 1.2e-28 131.7 309 32.0
Duzib093G1732 Durio zibethinus HOM05D007282 ORTHO05D009214 1.5e-28 131.3 320 31.9
vmacro07443 Vaccinium macrocarpon HOM05D007282 ORTHO05D009214 4.4e-28 129.8 385 29.6
Cpa.g.sc104.101 Carica papaya HOM05D007282 ORTHO05D009214 7.5e-28 129.0 325 31.7
SalBow3G4659 Salvia bowleyana HOM05D007282 ORTHO05D009214 7.5e-28 129.0 351 29.6
TWI53G0193 Tripterygium wilfordii HOM05D007282 ORTHO05D009214 9.8e-28 128.6 325 31.4
Peaxi162Scf00069g00612 Petunia axillaris HOM05D007282 ORTHO05D009214 1.3e-27 128.3 326 31.6
Prupe.7G102300 Prunus persica HOM05D007282 ORTHO05D009214 1.3e-27 128.3 80 81.2
CSS0014712 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 1.7e-27 127.9 317 30.9
CSS0036453 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 1.7e-27 127.9 317 30.9
Manes.08G027500 Manihot esculenta HOM05D000972 ORTHO05D007713 1.7e-27 127.9 321 31.8
arahy.Tifrunner.gnm1.ann1.LMCN1R Arachis hypogaea HOM05D007282 ORTHO05D009214 2.2e-27 127.5 78 79.5
arahy.Tifrunner.gnm1.ann1.TUP4W7 Arachis hypogaea HOM05D007282 ORTHO05D009214 2.2e-27 127.5 78 79.5
CANSAT64G2352 Cannabis sativa HOM05D007282 ORTHO05D009214 3.7e-27 126.7 322 32.0
GSVIVG01033882001 Vitis vinifera HOM05D007282 ORTHO05D009214 8.3e-27 125.6 86 73.3
Cc00_g15490 Coffea canephora HOM05D007282 ORTHO05D009214 1.1e-26 125.2 86 74.4
Lj2A142T14 Lonicera japonica HOM05D007282 ORTHO05D009214 1.1e-26 125.2 304 31.6
COL.COLO4_03547 Corchorus olitorius HOM05D007282 ORTHO05D009214 1.8e-26 124.4 78 78.2
FAN02G3890 Fragaria x ananassa HOM05D007282 ORTHO05D009214 1.8e-26 124.4 376 30.3
Eucgr.K02566 Eucalyptus grandis HOM05D007282 ORTHO05D009214 2.4e-26 124.0 304 31.6
ClCG04G010160 Citrullus lanatus HOM05D007282 ORTHO05D009214 4.1e-26 123.2 359 30.9
Haze_19645 Corylus avellana HOM05D007282 ORTHO05D009214 5.4e-26 122.9 326 32.8
MD12G1029300 Malus domestica HOM05D007282 ORTHO05D009214 7.0e-26 122.5 80 76.2
MSTRG.19274 Avicennia marina HOM05D007282 ORTHO05D009214 9.2e-26 122.1 86 68.6
Hma1.2p1_0769F.1_g215760 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 1.2e-25 121.7 75 80.0
CsaV3_6G040780 Cucumis sativus L. HOM05D007282 ORTHO05D009214 2.7e-25 120.6 86 72.1
FvH4_6g19360 Fragaria vesca HOM05D007282 ORTHO05D009214 2.7e-25 120.6 376 30.6
Aqoxy4G02730 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 4.6e-25 119.8 328 30.5
MELO3C024557.2 Cucumis melo HOM05D007282 ORTHO05D009214 5.9e-25 119.4 86 70.9
MD14G1029600 Malus domestica HOM05D007282 ORTHO05D009214 5.9e-25 119.4 80 75.0
RcHm_v2.0_Chr3g0474621 Rosa chinensis HOM05D007282 ORTHO05D009214 5.9e-25 119.4 83 73.5
SGA_v2.0_scaffold31G12895 Striga asiatica HOM05D007282 ORTHO05D009214 5.9e-25 119.4 86 69.8
Rhsim03G0070300 Rhododendron simsii HOM05D007282 ORTHO05D009214 1.3e-24 118.2 380 29.5
ECA248G2482 Erigeron canadensis HOM05D005132 ORTHO05D005823 1.7e-24 117.9 321 29.9
HPP92_001104 Vanilla planifolia HOM05D007282 ORTHO05D009214 1.7e-24 117.9 304 29.9
Zm00001eb366810 Zea mays HOM05D007282 ORTHO05D009214 2.3e-24 117.5 319 28.8
PGSC0003DMG400008863 Solanum tuberosum HOM05D007282 ORTHO05D009214 3.0e-24 117.1 326 31.0
Lsat_1_v5_gn_5_165601 Lactuca sativa HOM05D007282 ORTHO05D009214 3.9e-24 116.7 378 28.0
CDE02G2307 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 5.0e-24 116.3 80 73.8
Sed0020389 Sechium edule HOM05D007282 ORTHO05D009214 6.6e-24 115.9 324 30.6
Nitab4.5_0001875g0020 Nicotiana tabacum HOM05D007282 ORTHO05D009214 8.6e-24 115.5 78 71.8
ATR0820G206 Amborella trichopoda HOM05D007282 ORTHO05D009214 2.5e-23 114.0 322 29.2
Sopen09g004860 Solanum pennellii HOM05D007282 ORTHO05D009214 2.5e-23 114.0 347 29.4
HanXRQChr13g0390101 Helianthus annuus HOM05D007282 ORTHO05D009214 5.6e-23 112.8 80 67.5
Solyc09g010120.2 Solanum lycopersicum HOM05D007282 ORTHO05D009214 7.3e-23 112.5 86 65.1
Os01g0862200 Oryza sativa ssp. japonica HOM05D007282 ORTHO05D009214 1.2e-22 111.7 319 27.6
Sc02g0000410 Simmondsia chinensis HOM05D007282 ORTHO05D009214 2.1e-22 110.9 381 27.0
CDE08G0228 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 3.6e-22 110.2 86 64.0
CDE08G0791 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 3.6e-22 110.2 86 64.0
PSO384G4616 Papaver somniferum HOM05D007282 ORTHO05D009214 1.0e-21 108.6 343 28.3
PSO339G4969 Papaver somniferum HOM05D007282 ORTHO05D009214 1.8e-21 107.8 363 27.8
BcaC02g07630 Brassica carinata HOM05D007282 ORTHO05D009214 7.5e-20 102.4 307 27.4
BolC4t27996H Brassica oleracea HOM05D007282 ORTHO05D009214 7.5e-20 102.4 307 27.4
Thhalv10017280m.g Eutrema salsugineum HOM05D007282 ORTHO05D009214 7.5e-20 102.4 344 27.0
A04p27670 Brassica napus HOM05D000972 ORTHO05D009214 1.7e-19 101.3 307 27.0
BraA04t18262Z Brassica rapa HOM05D000972 ORTHO05D001783 1.7e-19 101.3 307 27.0
AL4G32230 Arabidopsis lyrata HOM05D007282 ORTHO05D009214 2.2e-19 100.9 301 28.6
Sp4g18380 Schrenkiella parvula HOM05D007282 ORTHO05D009214 2.2e-19 100.9 305 27.2
BcaB06g28919 Brassica carinata HOM05D000972 ORTHO05D001783 2.9e-19 100.5 307 26.7
AT2G36145 Arabidopsis thaliana HOM05D007282 ORTHO05D009214 3.7e-19 100.1 302 28.1
Aa31LG5G21280 Aethionema arabicum HOM05D007282 ORTHO05D009214 1.1e-18 98.6 363 25.6
AUR62036998 Chenopodium quinoa HOM05D007282 ORTHO05D009214 2.4e-18 97.4 87 57.5
THA.LOC104799754 Tarenaya hassleriana HOM05D007282 ORTHO05D009214 2.4e-18 97.4 94 57.4
CARHR130380 Cardamine hirsuta HOM05D007282 ORTHO05D009214 4.1e-18 96.7 302 27.8
AUR62006220 Chenopodium quinoa HOM05D007282 ORTHO05D009214 9.2e-18 95.5 87 57.5
EL10Ac7g16881 Beta vulgaris HOM05D007282 ORTHO05D009214 4.6e-17 93.2 83 55.4
Carub.0004s1791 Capsella rubella HOM05D007282 ORTHO05D009214 4.6e-17 93.2 84 57.1
DCAR_031561 Daucus carota HOM05D007282 ORTHO05D009214 6.0e-17 92.8 80 57.5
C04p65190 Brassica napus HOM05D007282 ORTHO05D009214 1.7e-16 91.3 74 63.5
DCAR_013409 Daucus carota HOM05D007282 ORTHO05D009214 2.3e-16 90.9 77 58.4
Hund03936 Selenicereus undatus HOM05D007282 ORTHO05D009214 1.1e-15 88.6 78 56.4
Pp3c14_14160 Physcomitrium patens HOM05D007282 ORTHO05D009214 5.6e-15 86.3 83 50.6
Aqoxy2G01255 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 3.6e-14 83.6 72 58.3
SMO353G0249 Selaginella moellendorffii HOM05D007282 ORTHO05D009214 3.6e-14 83.6 82 52.4
Aqoxy1G00013 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 4.7e-14 83.2 45 80.0
AagrBONN_evm.TU.Sc2ySwM_344.5307 Anthoceros agrestis HOM05D007282 ORTHO05D009214 6.2e-14 82.8 83 49.4
Glyma.02G201900 Glycine max HOM05D007282 ORTHO05D009214 2.3e-13 80.9 101 50.5
VMungo0720G2657 Vigna mungo HOM05D007282 ORTHO05D009214 1.5e-12 78.2 107 45.8
Mapoly0153s0036 Marchantia polymorpha HOM05D007282 ORTHO05D009214 1.3e-11 75.1 81 48.1
Actinidia05405 Actinidia chinensis HOM05D005132 ORTHO05D005823 7.8e-09 65.9 50 62.0
TAR369G0436 Trochodendron aralioides HOM05D007282 ORTHO05D009214 4.3e-07 60.1 52 55.8


User provided reference genes

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