Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_22205_v3 Cicer arietinum L. HOM05D000529 ORTHO05D044343 1.1e-75 286.6 143 100.0
Medtr0391s0020 Medicago truncatula HOM05D000529 ORTHO05D000472 3.4e-37 158.7 104 76.9
TPR.G19002 Trifolium pratense HOM05D000529 ORTHO05D000472 4.1e-35 151.8 102 73.5
TPR.G30323 Trifolium pratense HOM05D000529 ORTHO05D000472 1.3e-33 146.7 102 69.6
Ca_22206_v3 Cicer arietinum L. HOM05D000529 ORTHO05D000472 1.9e-32 142.9 105 67.6
Medtr8g079450 Medicago truncatula HOM05D000529 ORTHO05D000472 3.3e-32 142.1 103 70.9
TPR.G30540 Trifolium pratense HOM05D000529 ORTHO05D000472 1.2e-31 140.2 104 69.2
VMungo0251G0147 Vigna mungo HOM05D000529 ORTHO05D000472 4.7e-31 138.3 101 69.3
Phvul.003G247550 Phaseolus vulgaris HOM05D000529 ORTHO05D000472 3.0e-30 135.6 101 68.3
Medtr8g079360 Medicago truncatula HOM05D000529 ORTHO05D000472 4.0e-30 135.2 103 67.0
Psat4g088600 Pisum sativum HOM05D000529 ORTHO05D000472 1.7e-28 129.8 104 61.5
Glyma.05G082500 Glycine max HOM05D000529 ORTHO05D000472 6.4e-28 127.9 101 64.4
Glyma.17G180100 Glycine max HOM05D000529 ORTHO05D000472 1.2e-26 123.6 101 62.4
Glyma.17G179200 Glycine max HOM05D000529 ORTHO05D000472 3.0e-25 119.0 102 66.7
Medtr8g079400 Medicago truncatula HOM05D000529 ORTHO05D000472 6.6e-25 117.9 103 62.1
Phvul.003G247200 Phaseolus vulgaris HOM05D000529 ORTHO05D000472 2.5e-24 115.9 102 62.7
Glyma.05G082200 Glycine max HOM05D000529 ORTHO05D000472 4.3e-24 115.2 102 64.7
Lj4g0013898 Lotus japonicus HOM05D000529 ORTHO05D000472 4.3e-24 115.2 105 58.1
VMungo0251G3007 Vigna mungo HOM05D000529 ORTHO05D000472 2.8e-23 112.5 102 63.7
Lj4g0014150 Lotus japonicus HOM05D000529 ORTHO05D000472 2.3e-22 109.4 102 56.9
Lalb_Chr16g0388441 Lupinus albus HOM05D000529 ORTHO05D000472 2.3e-22 109.4 103 61.2
Lalb_Chr05g0226801 Lupinus albus HOM05D000529 ORTHO05D000472 9.8e-21 104.0 98 59.2
Medtr8g079350 Medicago truncatula HOM05D000529 ORTHO05D000472 9.8e-21 104.0 111 54.1
Medtr8g079280 Medicago truncatula HOM05D000529 ORTHO05D000472 2.4e-19 99.4 108 52.8
arahy.Tifrunner.gnm1.ann1.M35DT6 Arachis hypogaea HOM05D000529 ORTHO05D000472 2.1e-18 96.3 93 55.9
arahy.Tifrunner.gnm1.ann1.MIV8ZD Arachis hypogaea HOM05D000529 ORTHO05D000472 2.3e-17 92.8 93 53.8
Lj4g0018288 Lotus japonicus HOM05D000529 ORTHO05D000472 1.9e-16 89.7 113 46.9
VMungo0251G3107 Vigna mungo HOM05D000529 ORTHO05D000472 4.7e-15 85.1 59 69.5
Glyma.17G180000 Glycine max HOM05D000529 ORTHO05D000472 8.1e-15 84.3 59 71.2
Glyma.17G179400 Glycine max HOM05D000529 ORTHO05D000472 1.1e-14 84.0 59 69.5
arahy.Tifrunner.gnm1.ann1.4XA800 Arachis hypogaea HOM05D000529 ORTHO05D010311 1.4e-14 83.6 100 50.0
Glyma.05G082400 Glycine max HOM05D000529 ORTHO05D000472 1.4e-14 83.6 59 69.5
Phvul.003G247300 Phaseolus vulgaris HOM05D000529 ORTHO05D000472 1.4e-14 83.6 59 69.5
Phvul.003G247400 Phaseolus vulgaris HOM05D000529 ORTHO05D000472 2.3e-14 82.8 59 71.2
Phvul.003G247500 Phaseolus vulgaris HOM05D000529 ORTHO05D000472 5.2e-14 81.6 58 70.7
arahy.Tifrunner.gnm1.ann1.4KB2JU Arachis hypogaea HOM05D000529 ORTHO05D000472 1.2e-13 80.5 101 49.5
Glyma.11G058900 Glycine max HOM05D000529 ORTHO05D000472 1.5e-13 80.1 94 48.9
Glyma.17G179500 Glycine max HOM05D000529 ORTHO05D000472 2.6e-13 79.3 59 67.8
Psat4g088560 Pisum sativum HOM05D000529 ORTHO05D000472 2.6e-13 79.3 72 58.3
arahy.Tifrunner.gnm1.ann1.EI55Q9 Arachis hypogaea HOM05D000529 ORTHO05D000472 1.3e-12 77.0 95 48.4
arahy.Tifrunner.gnm1.ann1.HV9GRN Arachis hypogaea HOM05D000529 ORTHO05D000472 1.7e-12 76.6 91 48.4
Glyma.01G183400 Glycine max HOM05D000529 ORTHO05D000472 1.7e-12 76.6 94 46.8
Medtr5g018910 Medicago truncatula HOM05D000529 ORTHO05D000472 2.2e-12 76.3 94 48.9
VMungo0251G2825 Vigna mungo HOM05D000529 ORTHO05D000472 2.9e-12 75.9 60 61.7
Lj2g0013161 Lotus japonicus HOM05D000529 ORTHO05D000472 3.7e-12 75.5 94 48.9
TPR.G1717 Trifolium pratense HOM05D000529 ORTHO05D000472 4.9e-12 75.1 93 46.2
Ca_24798_v3 Cicer arietinum L. HOM05D000909 ORTHO05D000928 8.3e-12 74.3 94 48.9
VMungo1215G3170 Vigna mungo HOM05D000529 ORTHO05D000472 3.2e-11 72.4 87 48.3
Ca_24796_v3 Cicer arietinum L. HOM05D000529 ORTHO05D000472 5.4e-11 71.6 94 50.0
Phvul.002G021700 Phaseolus vulgaris HOM05D000529 ORTHO05D000472 7.1e-11 71.2 108 43.5
Lalb_Chr05g0213151 Lupinus albus HOM05D000529 ORTHO05D000472 9.2e-11 70.9 99 45.5
TPR.G11364 Trifolium pratense HOM05D000529 ORTHO05D000472 1.2e-10 70.5 93 46.2
Psat4g088520 Pisum sativum HOM05D005279 ORTHO05D044343 1.6e-10 70.1 50 68.0
arahy.Tifrunner.gnm1.ann1.Q3UCZQ Arachis hypogaea HOM05D000529 ORTHO05D000472 2.1e-10 69.7 99 46.5
TPR.G1702 Trifolium pratense HOM05D000529 ORTHO05D000472 2.1e-10 69.7 97 42.3
Medtr5g018210 Medicago truncatula HOM05D000529 ORTHO05D000472 2.7e-10 69.3 94 43.6
Psat2g164720 Pisum sativum HOM05D000529 ORTHO05D000472 2.7e-10 69.3 94 47.9
Medtr5g018060 Medicago truncatula HOM05D000529 ORTHO05D000472 7.8e-10 67.8 93 43.0
Prupe.7G139800 Prunus persica HOM05D000529 ORTHO05D000472 7.8e-10 67.8 95 45.3
RcHm_v2.0_Chr2g0104211 Rosa chinensis HOM05D000529 ORTHO05D000472 1.3e-09 67.0 76 53.9
RcHm_v2.0_Chr3g0480561 Rosa chinensis HOM05D000529 ORTHO05D000472 2.3e-09 66.2 95 38.9
RcHm_v2.0_Chr2g0104391 Rosa chinensis HOM05D000529 ORTHO05D000472 3.9e-09 65.5 95 38.9
Duzib147G1638 Durio zibethinus HOM05D000529 ORTHO05D000472 6.6e-09 64.7 107 41.1
FvH4_1g15130 Fragaria vesca HOM05D000529 ORTHO05D000472 8.6e-09 64.3 57 56.1
FAN19G2633 Fragaria x ananassa HOM05D000529 ORTHO05D000472 8.6e-09 64.3 57 56.1
Medtr5g018120 Medicago truncatula HOM05D000529 ORTHO05D000472 8.6e-09 64.3 86 40.7
Prupe.7G138800 Prunus persica HOM05D000529 ORTHO05D000472 1.1e-08 63.9 95 41.1
MD02G1164400 Malus domestica HOM05D000529 ORTHO05D000472 1.5e-08 63.5 95 41.1
MD15G1277700 Malus domestica HOM05D000529 ORTHO05D000472 1.5e-08 63.5 96 39.6
MD15G1278100 Malus domestica HOM05D000529 ORTHO05D000472 1.9e-08 63.2 94 42.6
Prupe.7G138900 Prunus persica HOM05D000529 ORTHO05D000472 1.9e-08 63.2 48 62.5
MD15G1278000 Malus domestica HOM05D000529 ORTHO05D000472 2.5e-08 62.8 97 38.1
Prupe.7G138500 Prunus persica HOM05D000529 ORTHO05D000472 2.5e-08 62.8 48 62.5
FvH4_1g15200 Fragaria vesca HOM05D000529 ORTHO05D000472 3.3e-08 62.4 55 60.0
FAN23G0006 Fragaria x ananassa HOM05D000529 ORTHO05D000472 3.3e-08 62.4 55 60.0
FAN28G0376 Fragaria x ananassa HOM05D000529 ORTHO05D000472 3.3e-08 62.4 95 37.9
FAN28G1580 Fragaria x ananassa HOM05D000529 ORTHO05D000472 3.3e-08 62.4 95 37.9
Glyma.01G183300 Glycine max HOM05D000529 ORTHO05D000472 3.3e-08 62.4 46 60.9
MD15G1277400 Malus domestica HOM05D000529 ORTHO05D000472 3.3e-08 62.4 97 38.1
TPR.G19028 Trifolium pratense HOM05D000529 ORTHO05D000472 3.3e-08 62.4 93 43.0
MD02G1165600 Malus domestica HOM05D000529 ORTHO05D000472 5.6e-08 61.6 96 39.6
Prupe.7G139200 Prunus persica HOM05D000529 ORTHO05D000472 5.6e-08 61.6 106 38.7
RcHm_v2.0_Chr3g0480541 Rosa chinensis HOM05D000529 ORTHO05D000472 5.6e-08 61.6 95 37.9
RcHm_v2.0_Chr3g0485281 Rosa chinensis HOM05D000529 ORTHO05D000472 5.6e-08 61.6 94 45.7
TPR.G11353 Trifolium pratense HOM05D000529 ORTHO05D000472 5.6e-08 61.6 107 36.4
Dinv29949 Davidia involucrata HOM05D000529 ORTHO05D000472 7.3e-08 61.2 103 38.8
FAN23G2222 Fragaria x ananassa HOM05D000529 ORTHO05D000472 7.3e-08 61.2 95 36.8
Prupe.7G138700 Prunus persica HOM05D000529 ORTHO05D000472 7.3e-08 61.2 48 60.4
Medtr8g079520 Medicago truncatula HOM05D000529 ORTHO05D000472 9.5e-08 60.8 89 43.8
Prupe.7G139500 Prunus persica HOM05D000529 ORTHO05D000472 9.5e-08 60.8 102 39.2
RcHm_v2.0_Chr2g0104191 Rosa chinensis HOM05D000529 ORTHO05D000472 1.2e-07 60.5 56 60.7
TPR.G35995 Trifolium pratense HOM05D000529 ORTHO05D000472 1.2e-07 60.5 46 58.7
Dinv29950 Davidia involucrata HOM05D000529 ORTHO05D000472 1.6e-07 60.1 103 38.8
RcHm_v2.0_Chr2g0104431 Rosa chinensis HOM05D000529 ORTHO05D000472 1.6e-07 60.1 95 36.8
Thecc.01G050400 Theobroma cacao HOM05D000529 ORTHO05D000472 1.6e-07 60.1 103 37.9
Lj4g0017861 Lotus japonicus HOM05D000529 ORTHO05D000472 2.1e-07 59.7 51 56.9
RcHm_v2.0_Chr2g0104611 Rosa chinensis HOM05D000046 ORTHO05D000472 2.1e-07 59.7 57 52.6
Sed0020887 Sechium edule HOM05D000529 ORTHO05D000472 2.1e-07 59.7 96 40.6
Duzib264G0157 Durio zibethinus HOM05D000529 ORTHO05D000472 2.8e-07 59.3 106 36.8
FvH4_1g15170 Fragaria vesca HOM05D000529 ORTHO05D000472 2.8e-07 59.3 95 35.8
FAN28G0545 Fragaria x ananassa HOM05D000529 ORTHO05D000472 2.8e-07 59.3 55 58.2
FAN28G0936 Fragaria x ananassa HOM05D000529 ORTHO05D000472 2.8e-07 59.3 55 58.2
Gohir.A11G189400 Gossypium hirsutum HOM05D000529 ORTHO05D000472 2.8e-07 59.3 111 33.3
Gohir.D11G196100 Gossypium hirsutum HOM05D000529 ORTHO05D000472 2.8e-07 59.3 111 33.3
Gorai.007G210000 Gossypium raimondii HOM05D000529 ORTHO05D000472 2.8e-07 59.3 111 33.3
TAR381G0813 Trochodendron aralioides HOM05D000529 ORTHO05D000472 2.8e-07 59.3 102 42.2
CiPaw.01G103200 Carya illinoinensis HOM05D000529 ORTHO05D000472 3.6e-07 58.9 85 43.5
RcHm_v2.0_Chr2g0170371 Rosa chinensis HOM05D000529 ORTHO05D000472 3.6e-07 58.9 104 37.5
Sed0001841 Sechium edule HOM05D000529 ORTHO05D000472 3.6e-07 58.9 95 40.0
TWI09G1247 Tripterygium wilfordii HOM05D000529 ORTHO05D000472 3.6e-07 58.9 93 36.6
CiPaw.01G024600 Carya illinoinensis HOM05D000529 ORTHO05D000472 4.7e-07 58.5 58 53.4
CiPaw.01G025100 Carya illinoinensis HOM05D000529 ORTHO05D000472 4.7e-07 58.5 58 53.4
Sabra07G0034700 Salix brachista HOM05D000529 ORTHO05D000472 4.7e-07 58.5 58 55.2
CiPaw.01G025300 Carya illinoinensis HOM05D000529 ORTHO05D000472 6.2e-07 58.2 85 43.5
FvH4_6g50130 Fragaria vesca HOM05D000529 ORTHO05D000472 6.2e-07 58.2 85 41.2
FAN14G0251 Fragaria x ananassa HOM05D000529 ORTHO05D000472 6.2e-07 58.2 85 41.2
FAN26G2892 Fragaria x ananassa HOM05D000529 ORTHO05D000472 6.2e-07 58.2 93 37.6
Lalb_Chr05g0226851 Lupinus albus HOM05D000529 ORTHO05D000472 6.2e-07 58.2 105 40.0
Potri.007G038700 Populus trichocarpa HOM05D000529 ORTHO05D000472 6.2e-07 58.2 58 53.4
QL02p078112 Quercus lobata HOM05D000529 ORTHO05D000472 6.2e-07 58.2 70 45.7
QL93p0205_0245 Quercus lobata HOM05D000529 ORTHO05D000472 6.2e-07 58.2 70 45.7
TPR.G11335 Trifolium pratense HOM05D000529 ORTHO05D000472 6.2e-07 58.2 129 36.4
arahy.Tifrunner.gnm1.ann1.BJ32EB Arachis hypogaea HOM05D000529 ORTHO05D000472 8.1e-07 57.8 115 37.4
arahy.Tifrunner.gnm1.ann1.FT124Y Arachis hypogaea HOM05D000529 ORTHO05D000472 8.1e-07 57.8 115 37.4
CARHR177840 Cardamine hirsuta HOM05D000529 ORTHO05D000472 8.1e-07 57.8 96 41.7
FvH4_1g15230 Fragaria vesca HOM05D000529 ORTHO05D000472 8.1e-07 57.8 95 35.8
FAN09G3452 Fragaria x ananassa HOM05D000529 ORTHO05D000472 8.1e-07 57.8 85 44.7
FAN28G2498 Fragaria x ananassa HOM05D000529 ORTHO05D000472 8.1e-07 57.8 95 36.8
CSS0017568 Camellia sinensis var. sinensis HOM05D000529 ORTHO05D000472 1.1e-06 57.4 99 37.4
CiPaw.01G024700 Carya illinoinensis HOM05D000529 ORTHO05D000472 1.1e-06 57.4 94 38.3
FAN09G0851 Fragaria x ananassa HOM05D000529 ORTHO05D000472 1.1e-06 57.4 52 51.9
MD02G1164800 Malus domestica HOM05D000529 ORTHO05D000472 1.1e-06 57.4 96 38.5
QL03p072647 Quercus lobata HOM05D000529 ORTHO05D000472 1.1e-06 57.4 51 51.0
QL03p072768 Quercus lobata HOM05D000529 ORTHO05D000472 1.1e-06 57.4 51 51.0
CiPaw.01G024000 Carya illinoinensis HOM05D000529 ORTHO05D000472 1.4e-06 57.0 49 55.1
FvH4_1g15220 Fragaria vesca HOM05D000529 ORTHO05D000472 1.4e-06 57.0 106 35.8
FAN23G2692 Fragaria x ananassa HOM05D000529 ORTHO05D000472 1.4e-06 57.0 106 35.8
FAN26G2366 Fragaria x ananassa HOM05D000529 ORTHO05D000472 1.4e-06 57.0 96 37.5
RcHm_v2.0_Chr2g0104311 Rosa chinensis HOM05D000529 ORTHO05D000472 1.4e-06 57.0 57 52.6
Dinv39897 Davidia involucrata HOM05D000529 ORTHO05D000472 1.8e-06 56.6 53 52.8
FAN28G0855 Fragaria x ananassa HOM05D000529 ORTHO05D000472 1.8e-06 56.6 106 35.8
MD06G1115800 Malus domestica HOM05D000094 ORTHO05D001414 1.8e-06 56.6 99 42.4
FvH4_1g15500 Fragaria vesca HOM05D000529 ORTHO05D000472 2.4e-06 56.2 103 40.8
FAN19G0833 Fragaria x ananassa HOM05D000529 ORTHO05D000472 2.4e-06 56.2 95 34.7
Prupe.7G139600 Prunus persica HOM05D000529 ORTHO05D000472 2.4e-06 56.2 121 34.7
QL01p034712 Quercus lobata HOM05D000529 ORTHO05D000472 2.4e-06 56.2 93 39.8
Haze_15450 Corylus avellana HOM05D000529 ORTHO05D000472 3.1e-06 55.8 49 55.1
Duzib264G0020 Durio zibethinus HOM05D000529 ORTHO05D000472 3.1e-06 55.8 110 37.3
FvH4_1g15160 Fragaria vesca HOM05D000529 ORTHO05D000472 3.1e-06 55.8 108 36.1
FvH4_4g31860 Fragaria vesca HOM05D000529 ORTHO05D000472 3.1e-06 55.8 57 57.9
FAN05G0579 Fragaria x ananassa HOM05D000529 ORTHO05D000472 3.1e-06 55.8 52 50.0
FAN19G2554 Fragaria x ananassa HOM05D000529 ORTHO05D000472 3.1e-06 55.8 108 36.1
Nn5g29352 Nelumbo nucifera HOM05D000529 ORTHO05D000472 3.1e-06 55.8 55 58.2
Oeu005309.1 Olea europaea HOM05D000529 ORTHO05D000472 3.1e-06 55.8 94 43.6
RcHm_v2.0_Chr2g0104241 Rosa chinensis HOM05D000529 ORTHO05D000472 3.1e-06 55.8 55 54.5
RcHm_v2.0_Chr2g0104331 Rosa chinensis HOM05D000529 ORTHO05D000472 3.1e-06 55.8 55 54.5
RcHm_v2.0_Chr2g0104761 Rosa chinensis HOM05D000529 ORTHO05D000472 3.1e-06 55.8 103 40.8
Cpa.g.sc6.402 Carica papaya HOM05D000529 ORTHO05D000472 4.0e-06 55.5 101 32.7
Cfa003972 Carpinus fangiana HOM05D000529 ORTHO05D000472 4.0e-06 55.5 55 52.7
FvH4_6g50110 Fragaria vesca HOM05D000529 ORTHO05D000472 4.0e-06 55.5 85 43.5
FAN12G2827 Fragaria x ananassa HOM05D000529 ORTHO05D000472 4.0e-06 55.5 57 57.9
FAN19G2597 Fragaria x ananassa HOM05D000529 ORTHO05D000472 4.0e-06 55.5 106 34.9
FAN28G2659 Fragaria x ananassa HOM05D000529 ORTHO05D000472 4.0e-06 55.5 95 35.8
Nn6g32090 Nelumbo nucifera HOM05D000529 ORTHO05D000472 4.0e-06 55.5 82 42.7
RcHm_v2.0_Chr2g0104381 Rosa chinensis HOM05D000529 ORTHO05D000472 4.0e-06 55.5 95 35.8
FvH4_1g15120 Fragaria vesca HOM05D000529 ORTHO05D000472 5.2e-06 55.1 96 39.6
FvH4_1g15140 Fragaria vesca HOM05D000529 ORTHO05D000472 5.2e-06 55.1 55 54.5
FvH4_1g17470 Fragaria vesca HOM05D000529 ORTHO05D000472 5.2e-06 55.1 95 33.7
Manes.12G094100 Manihot esculenta HOM05D000529 ORTHO05D000472 5.2e-06 55.1 102 37.3
Medtr8g079380 Medicago truncatula HOM05D000529 ORTHO05D000472 5.2e-06 55.1 41 68.3
CsaV3_6G043030 Cucumis sativus L. HOM05D000529 ORTHO05D000472 6.8e-06 54.7 100 36.0
Medtr8g479430 Medicago truncatula HOM05D000529 ORTHO05D000472 6.8e-06 54.7 92 35.9
QL01p034976 Quercus lobata HOM05D000529 ORTHO05D000472 6.8e-06 54.7 102 34.3
QL01p035044 Quercus lobata HOM05D000529 ORTHO05D000472 6.8e-06 54.7 103 35.9
RcHm_v2.0_Chr2g0104181 Rosa chinensis HOM05D000529 ORTHO05D000472 6.8e-06 54.7 50 60.0
RcHm_v2.0_Chr3g0485291 Rosa chinensis HOM05D000529 ORTHO05D000472 6.8e-06 54.7 62 48.4
TPR.G30328 Trifolium pratense HOM05D000529 ORTHO05D000472 6.8e-06 54.7 57 47.4
Psat0s3924g0040 Pisum sativum HOM05D000529 ORTHO05D000472 8.9e-06 54.3 96 39.6
PGR102G1567 Punica granatum HOM05D000529 ORTHO05D000472 8.9e-06 54.3 103 39.8
RcHm_v2.0_Chr2g0104171 Rosa chinensis HOM05D000529 ORTHO05D000472 8.9e-06 54.3 95 45.3


User provided reference genes

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