Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_22203_v3 Cicer arietinum L. HOM05D005463 ORTHO05D006900 4.8e-205 717.6 363 100.0
Medtr7g034345 Medicago truncatula HOM05D005463 ORTHO05D006900 9.1e-180 633.6 367 88.8
Psat5g207280 Pisum sativum HOM05D005463 ORTHO05D006900 6.5e-178 627.5 367 89.1
TPR.G12169 Trifolium pratense HOM05D005463 ORTHO05D006900 1.9e-177 625.9 370 89.2
Lj3g0018047 Lotus japonicus HOM05D005463 ORTHO05D006900 3.8e-162 575.1 366 82.2
VMungo1080G0018 Vigna mungo HOM05D005463 ORTHO05D006900 2.5e-161 572.4 363 81.8
Lalb_Chr25g0283441 Lupinus albus HOM05D005463 ORTHO05D006900 9.4e-161 570.5 376 79.3
Phvul.005G038200 Phaseolus vulgaris HOM05D005463 ORTHO05D006900 1.0e-159 567.0 365 81.4
Glyma.08G150800 Glycine max HOM05D005463 ORTHO05D006900 3.3e-158 562.0 372 81.2
Glyma.15G270200 Glycine max HOM05D005463 ORTHO05D006900 1.8e-156 556.2 371 80.1
Haze_03251 Corylus avellana HOM05D005463 ORTHO05D006900 3.7e-149 531.9 372 74.2
Cfa010722 Carpinus fangiana HOM05D005463 ORTHO05D006900 4.1e-148 528.5 372 73.7
CiPaw.13G001800 Carya illinoinensis HOM05D005463 ORTHO05D006900 1.5e-145 520.0 373 73.7
QL04p003263 Quercus lobata HOM05D005463 ORTHO05D006900 9.5e-145 517.3 371 73.0
BcaB06g27564 Brassica carinata HOM05D005463 ORTHO05D006900 2.8e-144 515.8 368 73.4
BcaC02g08999 Brassica carinata HOM05D005463 ORTHO05D006900 1.8e-143 513.1 371 73.3
BolC4t26367H Brassica oleracea HOM05D005463 ORTHO05D006900 1.8e-143 513.1 371 73.3
Manes.10G148700 Manihot esculenta HOM05D005463 ORTHO05D006900 3.0e-143 512.3 381 71.7
Prupe.2G005900 Prunus persica HOM05D005463 ORTHO05D006900 3.0e-143 512.3 371 73.6
CSS0012415 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 4.0e-143 511.9 366 73.2
Ciclev10031826m.g Citrus clementina HOM05D005463 ORTHO05D006900 1.2e-142 510.4 382 72.0
A04p13900 Brassica napus HOM05D005463 ORTHO05D006900 1.5e-142 510.0 372 72.0
BraA04t17055Z Brassica rapa HOM05D005463 ORTHO05D006900 1.5e-142 510.0 372 72.0
ClCG09G003850 Citrullus lanatus HOM05D005463 ORTHO05D006900 1.5e-142 510.0 384 70.3
C04p47660 Brassica napus HOM05D005463 ORTHO05D006900 2.6e-142 509.2 371 72.2
CSS0041052 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 3.4e-142 508.8 370 73.2
Sp7g01080 Schrenkiella parvula HOM05D005463 ORTHO05D006900 4.4e-142 508.4 374 72.2
Thhalv10027799m.g Eutrema salsugineum HOM05D005463 ORTHO05D006900 1.3e-141 506.9 372 72.0
Dinv43914 Davidia involucrata HOM05D005463 ORTHO05D006900 2.2e-141 506.1 329 79.3
CsaV3_7G031380 Cucumis sativus L. HOM05D005463 ORTHO05D006900 6.3e-141 504.6 376 70.7
Thecc.01G415300 Theobroma cacao HOM05D005463 ORTHO05D006900 6.3e-141 504.6 355 74.9
Potri.001G226900 Populus trichocarpa HOM05D005463 ORTHO05D006900 8.3e-141 504.2 372 70.4
TAR369G0415 Trochodendron aralioides HOM05D005463 ORTHO05D006900 1.4e-140 503.4 370 71.1
MELO3C023520.2 Cucumis melo HOM05D005463 ORTHO05D006900 2.4e-140 502.7 376 70.5
MD07G1002800 Malus domestica HOM05D005463 ORTHO05D006900 2.4e-140 502.7 385 70.1
Solyc01g086650.3 Solanum lycopersicum HOM05D005463 ORTHO05D006900 2.4e-140 502.7 372 71.8
Sopen01g033670 Solanum pennellii HOM05D005463 ORTHO05D006900 2.4e-140 502.7 372 71.8
BcaB02g07924 Brassica carinata HOM05D005463 ORTHO05D006900 4.1e-140 501.9 371 72.0
Sabra16G0135300 Salix brachista HOM05D005463 ORTHO05D006900 4.1e-140 501.9 372 69.9
TWI77G0271 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 4.1e-140 501.9 383 71.8
AL7G48760 Arabidopsis lyrata HOM05D005463 ORTHO05D006900 7.0e-140 501.1 370 72.7
PGSC0003DMG400025254 Solanum tuberosum HOM05D005463 ORTHO05D006900 9.2e-140 500.7 369 71.5
DCAR_006305 Daucus carota HOM05D005463 ORTHO05D006900 2.0e-139 499.6 357 73.7
AT5G40850 Arabidopsis thaliana HOM05D005463 ORTHO05D006900 2.7e-139 499.2 330 78.2
TAR623G0821 Trochodendron aralioides HOM05D005463 ORTHO05D006900 2.7e-139 499.2 369 70.5
CAN.G1393.12 Capsicum annuum HOM05D005463 ORTHO05D006900 7.8e-139 497.7 371 70.9
RcHm_v2.0_Chr6g0277781 Rosa chinensis HOM05D005463 ORTHO05D006900 7.8e-139 497.7 363 73.8
THA.LOC104819056 Tarenaya hassleriana HOM05D005463 ORTHO05D006900 1.7e-138 496.5 337 76.9
Lj7A567T29 Lonicera japonica HOM05D005463 ORTHO05D006900 2.9e-138 495.7 356 74.4
Carub.0007s3465 Capsella rubella HOM05D005463 ORTHO05D006900 5.0e-138 495.0 375 70.9
Cc02_g27320 Coffea canephora HOM05D005463 ORTHO05D006900 5.0e-138 495.0 358 72.6
Gohir.D10G064800 Gossypium hirsutum HOM05D005463 ORTHO05D006900 8.6e-138 494.2 358 73.5
Duzib114G0804 Durio zibethinus HOM05D005463 ORTHO05D006900 1.5e-137 493.4 365 71.2
PGR083G1038 Punica granatum HOM05D005463 ORTHO05D006900 1.9e-137 493.0 335 76.1
Nitab4.5_0006866g0010 Nicotiana tabacum HOM05D005463 ORTHO05D006900 4.3e-137 491.9 369 71.0
Lsat_1_v5_gn_4_46300 Lactuca sativa HOM05D005463 ORTHO05D006900 5.6e-137 491.5 360 72.8
Migut.B01346 Erythranthe guttata HOM05D005463 ORTHO05D006900 9.5e-137 490.7 374 70.3
SGA_v2.0_scaffold4G02241 Striga asiatica HOM05D005463 ORTHO05D006900 9.5e-137 490.7 374 70.9
Nitab4.5_0002239g0050 Nicotiana tabacum HOM05D005463 ORTHO05D006900 1.2e-136 490.3 368 71.5
Eucgr.H00541 Eucalyptus grandis HOM05D005463 ORTHO05D006900 2.1e-136 489.6 336 75.3
FAN06G3192 Fragaria x ananassa HOM05D005463 ORTHO05D006900 2.8e-136 489.2 384 69.8
RcHm_v2.0_Chr1g0314251 Rosa chinensis HOM05D005463 ORTHO05D006900 2.8e-136 489.2 378 70.6
CARHR213670 Cardamine hirsuta HOM05D005463 ORTHO05D006900 6.1e-136 488.0 326 78.5
Gorai.011G068800 Gossypium raimondii HOM05D005463 ORTHO05D006900 1.0e-135 487.3 359 72.7
FAN03G0244 Fragaria x ananassa HOM05D005463 ORTHO05D006900 1.4e-135 486.9 380 70.0
CANSAT11G2548 Cannabis sativa HOM05D005463 ORTHO05D006900 2.3e-135 486.1 384 68.2
Sed0008391 Sechium edule HOM05D005463 ORTHO05D006900 8.9e-135 484.2 372 71.0
PSO541G2837 Papaver somniferum HOM05D005463 ORTHO05D006900 1.2e-134 483.8 331 75.2
Nn7g36051 Nelumbo nucifera HOM05D005463 ORTHO05D006900 2.6e-134 482.6 335 73.7
Oeu047540.1 Olea europaea HOM05D005463 ORTHO05D006900 3.4e-134 482.3 378 68.0
Peaxi162Scf00058g00512 Petunia axillaris HOM05D005463 ORTHO05D006900 3.4e-134 482.3 368 69.6
Ah.05g166840 Amaranthus hybridus HOM05D005463 ORTHO05D006900 4.4e-134 481.9 377 69.2
MBI07_g21780_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 5.8e-134 481.5 361 70.9
Aa31sc48G90 Aethionema arabicum HOM05D005463 ORTHO05D006900 7.5e-134 481.1 387 66.9
CDE09G0814 Ceratophyllum demersum HOM05D005463 ORTHO05D006900 7.5e-134 481.1 322 77.3
MBI19_g42082_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 7.5e-134 481.1 361 70.9
Aqoxy2G00060 Aquilegia oxysepala HOM05D005463 ORTHO05D006900 3.7e-133 478.8 372 70.7
SGA_v2.0_scaffold95G28785 Striga asiatica HOM05D005463 ORTHO05D006900 3.7e-133 478.8 406 65.3
Actinidia32326 Actinidia chinensis HOM05D005463 ORTHO05D006900 1.1e-132 477.2 325 76.0
vmacro13633 Vaccinium macrocarpon HOM05D005463 ORTHO05D006900 1.1e-132 477.2 373 69.4
Hund11459 Selenicereus undatus HOM05D005463 ORTHO05D006900 7.0e-132 474.6 326 76.4
arahy.Tifrunner.gnm1.ann1.35ND81 Arachis hypogaea HOM05D005463 ORTHO05D006900 7.8e-131 471.1 336 76.2
Rhsim07G0052500 Rhododendron simsii HOM05D005463 ORTHO05D006900 2.3e-130 469.5 398 66.8
HanXRQChr16g0520501 Helianthus annuus HOM05D005463 ORTHO05D006900 3.9e-130 468.8 363 70.0
EL10Ac1g02324 Beta vulgaris HOM05D005463 ORTHO05D006900 7.3e-129 464.5 330 72.7
Sc20g0006350 Simmondsia chinensis HOM05D005463 ORTHO05D006900 6.2e-128 461.5 372 67.2
ATR0709G016 Amborella trichopoda HOM05D005463 ORTHO05D006900 1.1e-127 460.7 362 67.1
Duzib138G0896 Durio zibethinus HOM05D005463 ORTHO05D006900 1.1e-127 460.7 351 70.7
COL.COLO4_23908 Corchorus olitorius HOM05D000259 ORTHO05D000155 1.2e-126 457.2 302 78.1
ECA234G3252 Erigeron canadensis HOM05D005463 ORTHO05D006900 4.9e-125 451.8 371 68.2
AUR62034961 Chenopodium quinoa HOM05D005463 ORTHO05D006900 6.4e-125 451.4 340 69.4
Zm00001eb159150 Zea mays HOM05D005463 ORTHO05D006900 2.4e-124 449.5 375 64.8
MBI19_g47932_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 5.4e-124 448.4 361 67.3
AUR62035771 Chenopodium quinoa HOM05D005463 ORTHO05D006900 7.0e-124 448.0 348 68.7
Manes.07G002600 Manihot esculenta HOM05D005463 ORTHO05D006900 2.7e-123 446.0 318 74.8
SalBow4G1191 Salvia bowleyana HOM05D005463 ORTHO05D006900 2.3e-122 443.0 325 72.6
TWI74G0716 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 6.6e-122 441.4 298 77.2
FAN10G2111 Fragaria x ananassa HOM05D005463 ORTHO05D006900 4.3e-121 438.7 337 71.5
GSVIVG01032030001 Vitis vinifera HOM05D005463 ORTHO05D006900 4.3e-121 438.7 278 81.3
FvH4_7g00480 Fragaria vesca HOM05D005463 ORTHO05D006900 7.3e-121 438.0 337 71.5
Medtr3g026780 Medicago truncatula HOM05D005463 ORTHO05D006900 6.2e-120 434.9 234 94.4
Zm00001eb358930 Zea mays HOM05D005463 ORTHO05D006900 4.0e-111 405.6 322 68.9
Mapoly0087s0054 Marchantia polymorpha HOM05D005463 ORTHO05D006900 5.8e-110 401.7 299 67.9
Pp3c10_8730 Physcomitrium patens HOM05D005463 ORTHO05D006900 5.8e-110 401.7 289 67.8
HPP92_020287 Vanilla planifolia HOM05D005463 ORTHO05D006900 1.3e-109 400.6 291 71.1
Cpa.g.sc1133.2 Carica papaya HOM05D005463 ORTHO05D006900 2.9e-109 399.4 387 60.7
SMO174G0240 Selaginella moellendorffii HOM05D005463 ORTHO05D006900 2.4e-108 396.4 326 64.4
TPR.G33976 Trifolium pratense HOM05D005463 ORTHO05D006900 5.8e-102 375.2 280 73.2
CBR_g4488 Chara braunii HOM05D005463 ORTHO05D006900 3.5e-99 365.9 285 63.9
ATR1100G030 Amborella trichopoda HOM05D005463 ORTHO05D006900 6.2e-96 355.1 283 65.0
unitig_61.g26444 Utricularia gibba HOM05D005463 ORTHO05D006900 6.4e-93 345.1 295 65.1
Os01g0631200 Oryza sativa ssp. japonica HOM05D005463 ORTHO05D006900 9.0e-87 324.7 200 81.0
Cre09.g396401 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D006900 4.2e-84 315.8 268 59.3
PRCOL_00005728 Prasinoderma coloniale HOM05D005463 ORTHO05D006900 5.6e-81 305.4 239 60.3
MCO12G109 Micromonas commoda HOM05D005463 ORTHO05D006900 1.2e-78 297.7 254 57.1
MBI10_g23170_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 1.9e-76 290.4 229 68.1
Gohir.A10G063300 Gossypium hirsutum HOM05D005463 ORTHO05D006900 1.6e-72 277.3 212 71.7
SEGI_24059 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 1.4e-66 257.7 174 73.6
Dinv43913 Davidia involucrata HOM05D005463 ORTHO05D006900 6.3e-64 248.8 203 68.0
RcHm_v2.0_Chr4g0408791 Rosa chinensis HOM05D005463 ORTHO05D006900 5.7e-57 225.7 157 74.5
AagrBONN_evm.TU.Sc2ySwM_344.3224 Anthoceros agrestis HOM05D005463 ORTHO05D006900 2.3e-50 203.8 235 50.6
arahy.Tifrunner.gnm1.ann1.UWT5DF Arachis hypogaea HOM05D005463 ORTHO05D006900 3.3e-49 199.9 109 91.7
Oeu010361.1 Olea europaea HOM05D005463 ORTHO05D006900 1.4e-47 194.5 188 58.0
Prupe.I005100 Prunus persica HOM05D005463 ORTHO05D006900 1.4e-47 194.5 115 85.2
Hma1.2p1_1089F.1_g255720 Hydrangea macrophylla HOM05D005463 ORTHO05D006900 1.2e-46 191.4 187 60.4
RcHm_v2.0_Chr6g0260851 Rosa chinensis HOM05D005463 ORTHO05D006900 2.9e-45 186.8 134 74.6
MSTRG.17019 Avicennia marina HOM05D005463 ORTHO05D006900 5.5e-44 182.6 189 56.6
MSTRG.17060 Avicennia marina HOM05D005463 ORTHO05D006900 2.7e-43 180.3 189 56.1
SEGI_02284 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 6.1e-35 152.5 106 67.0
Cfa024173 Carpinus fangiana HOM05D005463 ORTHO05D006900 1.0e-29 135.2 303 31.4
Cre12.g538650 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D044100 6.6e-29 132.5 279 31.2
Haze_27481 Corylus avellana HOM05D005463 ORTHO05D006900 2.4e-23 114.0 164 37.8
ATR0709G040 Amborella trichopoda HOM05D005463 ORTHO05D006900 2.0e-22 110.9 156 43.6
Nn3g19661 Nelumbo nucifera HOM05D005463 ORTHO05D006900 5.9e-22 109.4 176 43.8
MCO11G851 Micromonas commoda HOM05D005463 ORTHO05D044100 1.0e-21 108.6 241 30.7
CAN.G762.7 Capsicum annuum HOM05D005463 ORTHO05D006900 2.1e-19 100.9 77 68.8
RcHm_v2.0_Chr1g0375041 Rosa chinensis HOM05D005463 ORTHO05D006900 1.8e-18 97.8 50 94.0
MBI14_g30707_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 2.7e-14 84.0 65 61.5
CAN.G244.9 Capsicum annuum HOM05D005463 ORTHO05D006900 1.1e-12 78.6 84 51.2
RcHm_v2.0_Chr4g0408811 Rosa chinensis HOM05D005463 ORTHO05D006900 5.6e-12 76.3 109 49.5


User provided reference genes

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