Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21178_v3 Cicer arietinum L. HOM05D008581 ORTHO05D009966 6.7e-54 213.8 108 100.0
Ca_22185_v3 Cicer arietinum L. HOM05D008581 ORTHO05D009966 6.7e-54 213.8 108 100.0
Psat4g087360 Pisum sativum HOM05D008581 ORTHO05D011864 4.8e-28 127.9 113 61.9
TPR.G745 Trifolium pratense HOM05D008581 ORTHO05D009966 6.5e-25 117.5 114 64.9
Lalb_Chr16g0378261 Lupinus albus HOM05D008581 ORTHO05D011864 5.0e-17 91.3 110 47.3
Lalb_Chr16g0378441 Lupinus albus HOM05D008581 ORTHO05D011864 5.0e-17 91.3 110 47.3
Lalb_Chr05g0213241 Lupinus albus HOM05D008581 ORTHO05D011864 6.5e-17 90.9 110 50.9
Phvul.003G245400 Phaseolus vulgaris HOM05D008581 ORTHO05D009966 7.2e-16 87.4 110 50.9
Glyma.11G057100 Glycine max HOM05D008581 ORTHO05D011864 1.2e-15 86.7 108 49.1
Glyma.01G185100 Glycine max HOM05D008581 ORTHO05D009966 3.7e-12 75.1 109 46.8
QL06p042046 Quercus lobata HOM05D008581 ORTHO05D009966 3.7e-12 75.1 120 43.3
VMungo1215G0067 Vigna mungo HOM05D008581 ORTHO05D011864 3.7e-12 75.1 108 43.5
Phvul.002G020000 Phaseolus vulgaris HOM05D008581 ORTHO05D011864 4.1e-11 71.6 109 44.0
QL06p042091 Quercus lobata HOM05D008581 ORTHO05D009966 4.1e-11 71.6 119 39.5
QL06p042132 Quercus lobata HOM05D008581 ORTHO05D009966 2.0e-10 69.3 120 40.8
Atru.chr3.367 Acer truncatum HOM05D008581 ORTHO05D009966 7.7e-10 67.4 128 37.5
Potri.005G136800 Populus trichocarpa HOM05D008581 ORTHO05D009966 7.7e-10 67.4 119 40.3
Sabra07G0037300 Salix brachista HOM05D008581 ORTHO05D009966 7.7e-10 67.4 116 43.1
Ca_21180_v3 Cicer arietinum L. HOM05D010906 ORTHO05D011864 1.3e-09 66.6 86 48.8
Ciclev10027209m.g Citrus clementina HOM05D008581 ORTHO05D009966 2.2e-09 65.9 132 40.2
TPR.G19008 Trifolium pratense HOM05D010906 ORTHO05D011864 2.2e-09 65.9 113 46.0
Cfa004000 Carpinus fangiana HOM05D008581 ORTHO05D009966 2.9e-09 65.5 120 41.7
Glyma.17G176900 Glycine max HOM05D008581 ORTHO05D009966 3.8e-09 65.1 111 37.8
Potri.007G042000 Populus trichocarpa HOM05D008581 ORTHO05D009966 3.8e-09 65.1 122 37.7
Thecc.01G053400 Theobroma cacao HOM05D008581 ORTHO05D009966 3.8e-09 65.1 125 40.0
COL.COLO4_11388 Corchorus olitorius HOM05D008581 ORTHO05D009966 8.5e-09 63.9 127 38.6
arahy.Tifrunner.gnm1.ann1.7MI303 Arachis hypogaea HOM05D010906 ORTHO05D011864 1.1e-08 63.5 108 42.6
DCAR_025723 Daucus carota HOM05D008581 ORTHO05D009966 1.1e-08 63.5 124 37.9
Lj4g0014874 Lotus japonicus HOM05D008581 ORTHO05D011864 3.2e-08 62.0 110 44.5
arahy.Tifrunner.gnm1.ann1.HVX4VE Arachis hypogaea HOM05D010906 ORTHO05D011864 4.2e-08 61.6 108 41.7
Atru.chr3.365 Acer truncatum HOM05D008581 ORTHO05D009966 9.4e-08 60.5 126 35.7
Lj7C67G2 Lonicera japonica HOM05D008581 ORTHO05D009966 9.4e-08 60.5 115 40.0
Gohir.A02G159700 Gossypium hirsutum HOM05D013202 ORTHO05D009966 2.7e-07 58.9 109 38.5
Peaxi162Scf00916g00007 Petunia axillaris HOM05D012691 ORTHO05D009966 3.6e-07 58.5 126 38.9
BcaC03g18399 Brassica carinata HOM05D011091 ORTHO05D013198 4.7e-07 58.2 115 33.0
BolC2t12539H Brassica oleracea HOM05D011091 ORTHO05D013198 4.7e-07 58.2 115 33.0
Gohir.A02G159800 Gossypium hirsutum HOM05D013202 ORTHO05D009966 4.7e-07 58.2 109 41.3
Gohir.D03G021000 Gossypium hirsutum HOM05D013202 ORTHO05D009966 4.7e-07 58.2 108 38.0
Hma1.2p1_1415F.1_g282020 Hydrangea macrophylla HOM05D008581 ORTHO05D009966 4.7e-07 58.2 125 37.6
Lj7C64T2 Lonicera japonica HOM05D008581 ORTHO05D009966 4.7e-07 58.2 116 35.3
Manes.12G100000 Manihot esculenta HOM05D008581 ORTHO05D009966 4.7e-07 58.2 129 35.7
Gorai.003G022400 Gossypium raimondii HOM05D013202 ORTHO05D009966 8.0e-07 57.4 108 38.0
Gohir.D03G020800 Gossypium hirsutum HOM05D013202 ORTHO05D009966 1.0e-06 57.0 109 42.2
Gorai.003G022000 Gossypium raimondii HOM05D013202 ORTHO05D009966 1.0e-06 57.0 109 42.2
Gorai.003G022200 Gossypium raimondii HOM05D013202 ORTHO05D009966 1.4e-06 56.6 108 38.0
Gorai.003G022300 Gossypium raimondii HOM05D013202 ORTHO05D009966 3.0e-06 55.5 109 36.7
C02p64780 Brassica napus HOM05D011091 ORTHO05D013198 4.0e-06 55.1 115 32.2
Ah.02g124160 Amaranthus hybridus HOM05D015383 ORTHO05D009966 6.7e-06 54.3 113 35.4
ECA232G4194 Erigeron canadensis HOM05D008581 ORTHO05D009966 6.7e-06 54.3 106 32.1
Lj7C67T5 Lonicera japonica HOM05D008581 ORTHO05D009966 6.7e-06 54.3 111 38.7
MELO3C007553.2 Cucumis melo HOM05D022436 ORTHO05D009966 8.8e-06 53.9 117 34.2
Manes.13G126600 Manihot esculenta HOM05D008581 ORTHO05D009966 8.8e-06 53.9 124 37.1
Nn1g05851 Nelumbo nucifera HOM05D007434 ORTHO05D009541 8.8e-06 53.9 112 38.4


User provided reference genes

Program Settings