Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_22096_v3 Cicer arietinum L. HOM05D000754 ORTHO05D000169 1.7e-75 286.2 176 100.0
TPR.G3728 Trifolium pratense HOM05D000754 ORTHO05D000169 4.0e-56 221.9 173 66.5
Psat0ss26165g0040 Pisum sativum HOM05D000754 ORTHO05D000169 7.5e-55 217.6 173 66.5
Medtr4g097440 Medicago truncatula HOM05D000754 ORTHO05D000169 6.4e-54 214.5 173 65.3
Lj4g0006564 Lotus japonicus HOM05D000754 ORTHO05D000169 8.9e-40 167.5 178 57.3
Lalb_Chr09g0323741 Lupinus albus HOM05D000754 ORTHO05D000169 1.2e-33 147.1 176 47.2
Phvul.003G233200 Phaseolus vulgaris HOM05D000754 ORTHO05D000169 2.1e-33 146.4 173 50.3
VMungo0251G0820 Vigna mungo HOM05D000754 ORTHO05D000169 7.6e-31 137.9 175 48.6
Glyma.17G158900 Glycine max HOM05D000754 ORTHO05D000169 2.9e-30 136.0 172 48.3
Phvul.002G009200 Phaseolus vulgaris HOM05D000754 ORTHO05D000169 1.4e-29 133.7 171 47.4
Glyma.11G045900 Glycine max HOM05D000754 ORTHO05D000169 1.2e-28 130.6 179 46.9
Glyma.01G195800 Glycine max HOM05D000754 ORTHO05D000169 1.6e-28 130.2 172 47.7
arahy.Tifrunner.gnm1.ann1.JTRU7S Arachis hypogaea HOM05D000754 ORTHO05D000169 4.6e-28 128.6 176 46.0
TPR.G9335 Trifolium pratense HOM05D000754 ORTHO05D000169 1.1e-26 124.0 162 47.5
Medtr5g015090 Medicago truncatula HOM05D000754 ORTHO05D000169 3.6e-25 119.0 162 45.1
Psat2g172480 Pisum sativum HOM05D000754 ORTHO05D000169 6.2e-25 118.2 173 46.2
VMungo1215G0337 Vigna mungo HOM05D000754 ORTHO05D000169 8.1e-25 117.9 179 47.5
arahy.Tifrunner.gnm1.ann1.449CV2 Arachis hypogaea HOM05D000754 ORTHO05D000169 3.1e-24 115.9 176 43.8
Cpa.g.sc129.74 Carica papaya HOM05D000754 ORTHO05D000169 4.0e-24 115.5 185 41.1
MD02G1189300 Malus domestica HOM05D000754 ORTHO05D000169 5.2e-24 115.2 192 41.7
Potri.007G006900 Populus trichocarpa HOM05D000754 ORTHO05D000169 5.2e-24 115.2 184 39.7
TWI74G1229 Tripterygium wilfordii HOM05D000754 ORTHO05D000169 9.0e-24 114.4 176 39.8
Lalb_Chr16g0378971 Lupinus albus HOM05D000754 ORTHO05D000169 1.5e-23 113.6 160 42.5
Glyma.05G108200 Glycine max HOM05D000754 ORTHO05D000169 2.0e-23 113.2 183 45.4
Thecc.01G075900 Theobroma cacao HOM05D000754 ORTHO05D000169 3.4e-23 112.5 182 38.5
Duzib264G0179 Durio zibethinus HOM05D000754 ORTHO05D000169 9.9e-23 110.9 183 39.3
Manes.13G109400 Manihot esculenta HOM05D000754 ORTHO05D000169 9.9e-23 110.9 177 40.7
FAN19G0912 Fragaria x ananassa HOM05D000754 ORTHO05D000169 6.4e-22 108.2 198 40.4
Potri.014G007100 Populus trichocarpa HOM05D000754 ORTHO05D000169 5.4e-21 105.1 192 38.5
Prupe.6G217300 Prunus persica HOM05D000754 ORTHO05D000169 9.3e-21 104.4 206 38.8
Atru.chr3.1056 Acer truncatum HOM05D000754 ORTHO05D000169 1.2e-20 104.0 174 39.1
Ciclev10027584m.g Citrus clementina HOM05D000754 ORTHO05D000169 2.1e-20 103.2 175 39.4
COL.COLO4_11611 Corchorus olitorius HOM05D000754 ORTHO05D000169 2.1e-20 103.2 181 35.4
Duzib147G0338 Durio zibethinus HOM05D000754 ORTHO05D000169 2.1e-20 103.2 184 39.1
Duzib187G1715 Durio zibethinus HOM05D000754 ORTHO05D000169 2.7e-20 102.8 182 36.8
FAN26G0075 Fragaria x ananassa HOM05D000754 ORTHO05D000169 3.5e-20 102.4 198 38.9
Gorai.008G085300 Gossypium raimondii HOM05D000754 ORTHO05D000169 4.6e-20 102.1 182 38.5
QL06p038974 Quercus lobata HOM05D000754 ORTHO05D000169 1.0e-19 100.9 204 36.8
Gohir.D12G076700 Gossypium hirsutum HOM05D000754 ORTHO05D000169 1.7e-19 100.1 182 37.4
FAN28G2566 Fragaria x ananassa HOM05D000754 ORTHO05D000169 1.1e-18 97.4 197 37.1
Gohir.A12G078400 Gossypium hirsutum HOM05D000754 ORTHO05D000169 1.3e-17 94.0 176 36.9
Manes.12G117300 Manihot esculenta HOM05D000754 ORTHO05D000169 3.6e-17 92.4 176 35.2
FAN23G2905 Fragaria x ananassa HOM05D000754 ORTHO05D000169 4.8e-17 92.0 198 37.9
Gohir.A12G080000 Gossypium hirsutum HOM05D000754 ORTHO05D000169 1.8e-16 90.1 183 35.5
Gohir.D11G052500 Gossypium hirsutum HOM05D000754 ORTHO05D000169 1.8e-16 90.1 188 34.6
Gorai.008G085200 Gossypium raimondii HOM05D000754 ORTHO05D000169 1.8e-16 90.1 176 36.4
Gohir.D03G030500 Gossypium hirsutum HOM05D000754 ORTHO05D000169 3.1e-16 89.4 172 32.6
RcHm_v2.0_Chr2g0108691 Rosa chinensis HOM05D000754 ORTHO05D000169 3.1e-16 89.4 205 35.1
MD15G1300200 Malus domestica HOM05D000754 ORTHO05D000169 4.0e-16 89.0 197 36.5
Gohir.D12G076600 Gossypium hirsutum HOM05D000754 ORTHO05D000169 5.3e-16 88.6 176 36.4
Gorai.003G032100 Gossypium raimondii HOM05D000754 ORTHO05D000169 6.9e-16 88.2 170 32.9
CANSAT01G0483 Cannabis sativa HOM05D000754 ORTHO05D000169 2.0e-15 86.7 195 33.3
Gorai.007G056900 Gossypium raimondii HOM05D000754 ORTHO05D000169 2.0e-15 86.7 188 33.5
Sabra14G0006500 Salix brachista HOM05D000754 ORTHO05D000169 3.4e-15 85.9 163 35.6
Gohir.A11G048900 Gossypium hirsutum HOM05D000754 ORTHO05D000169 4.5e-15 85.5 188 33.5
Eucgr.H02330 Eucalyptus grandis HOM05D000754 ORTHO05D000169 7.6e-15 84.7 159 33.3
Gohir.A02G149900 Gossypium hirsutum HOM05D000754 ORTHO05D000169 1.3e-14 84.0 182 32.4
PGR004G2429 Punica granatum HOM05D000754 ORTHO05D000169 3.8e-14 82.4 70 55.7
THA.LOC104827731 Tarenaya hassleriana HOM05D000754 ORTHO05D000169 1.1e-13 80.9 187 31.6
CsaV3_6G044300 Cucumis sativus L. HOM05D000754 ORTHO05D000169 3.2e-13 79.3 179 37.4
CiPaw.01G002300 Carya illinoinensis HOM05D000754 ORTHO05D000169 9.3e-13 77.8 203 30.0
ClCG01G017780 Citrullus lanatus HOM05D000754 ORTHO05D000169 1.2e-12 77.4 169 34.9
Cfa004385 Carpinus fangiana HOM05D000754 ORTHO05D000169 2.1e-12 76.6 213 33.3
CSS0034114 Camellia sinensis var. sinensis HOM05D000754 ORTHO05D000169 7.9e-12 74.7 192 31.8
AL334U10020 Arabidopsis lyrata HOM05D000754 ORTHO05D000169 1.8e-11 73.6 187 31.6
MELO3C007655.2 Cucumis melo HOM05D000754 ORTHO05D000169 1.8e-11 73.6 180 33.9
Oeu013337.1 Olea europaea HOM05D000754 ORTHO05D000169 2.3e-11 73.2 204 32.4
Oeu032433.1 Olea europaea HOM05D000754 ORTHO05D000169 2.3e-11 73.2 187 32.6
Migut.H00326 Erythranthe guttata HOM05D000754 ORTHO05D000169 8.7e-11 71.2 184 31.5
DCAR_010801 Daucus carota HOM05D000754 ORTHO05D000169 1.1e-10 70.9 189 30.7
vmacro18014 Vaccinium macrocarpon HOM05D000754 ORTHO05D000169 1.9e-10 70.1 77 48.1
vmacro23300 Vaccinium macrocarpon HOM05D000754 ORTHO05D000169 1.9e-10 70.1 77 48.1
Hma1.2p1_1139F.1_g260890 Hydrangea macrophylla HOM05D000754 ORTHO05D000169 3.3e-10 69.3 206 30.1
Lsat_1_v5_gn_2_80220 Lactuca sativa HOM05D000754 ORTHO05D000169 5.6e-10 68.6 178 32.0
Lj7P112T12 Lonicera japonica HOM05D000754 ORTHO05D000169 9.6e-10 67.8 179 32.4
AL8G43580 Arabidopsis lyrata HOM05D000754 ORTHO05D000169 1.3e-09 67.4 186 30.6
Rhsim08G0091200 Rhododendron simsii HOM05D000754 ORTHO05D000169 1.6e-09 67.0 143 32.2
Rhsim08G0090600 Rhododendron simsii HOM05D000754 ORTHO05D000169 2.1e-09 66.6 143 32.2
THA.LOC104819272 Tarenaya hassleriana HOM05D000754 ORTHO05D000169 2.8e-09 66.2 192 29.2
Cc07_g07330 Coffea canephora HOM05D000754 ORTHO05D000169 3.7e-09 65.9 133 37.6
Nn6g34519 Nelumbo nucifera HOM05D000754 ORTHO05D000169 4.8e-09 65.5 154 31.8
Sed0020432 Sechium edule HOM05D000754 ORTHO05D000169 4.8e-09 65.5 169 42.6
Aqoxy6G02482 Aquilegia oxysepala HOM05D000754 ORTHO05D000169 6.2e-09 65.1 175 32.0
Thhalv10010997m.g Eutrema salsugineum HOM05D000754 ORTHO05D000169 8.1e-09 64.7 167 31.1
Lj2g0006680 Lotus japonicus HOM05D000754 ORTHO05D000169 8.1e-09 64.7 169 32.0
Dinv26956 Davidia involucrata HOM05D000754 ORTHO05D000169 1.4e-08 63.9 72 47.2
PGR102G3091 Punica granatum HOM05D000754 ORTHO05D000169 1.4e-08 63.9 184 41.8
Sed0018678 Sechium edule HOM05D000754 ORTHO05D000169 1.4e-08 63.9 178 36.0
Carub.0008s2675 Capsella rubella HOM05D000754 ORTHO05D000169 2.4e-08 63.2 183 29.5
TAR376G1084 Trochodendron aralioides HOM05D000754 ORTHO05D000169 2.4e-08 63.2 170 31.2
AT3G49760 Arabidopsis thaliana HOM05D000754 ORTHO05D000169 3.1e-08 62.8 161 30.4
TAR628G1392 Trochodendron aralioides HOM05D000754 ORTHO05D000169 3.1e-08 62.8 168 28.6
PGSC0003DMG400005476 Solanum tuberosum HOM05D000697 ORTHO05D000169 9.0e-08 61.2 176 30.7
Sopen02g036670 Solanum pennellii HOM05D016759 ORTHO05D000169 3.4e-07 59.3 208 40.4
THA.LOC104804197 Tarenaya hassleriana HOM05D000754 ORTHO05D000169 3.4e-07 59.3 74 40.5
C02p64350 Brassica napus HOM05D000754 ORTHO05D000169 4.5e-07 58.9 76 39.5
Carub.0005s1612 Capsella rubella HOM05D000754 ORTHO05D000169 4.5e-07 58.9 180 27.2
MBI16_g45152_MAGBIO Magnolia biondii HOM05D000754 ORTHO05D000169 4.5e-07 58.9 60 50.0
CSS0007195 Camellia sinensis var. sinensis HOM05D000754 ORTHO05D000169 5.8e-07 58.5 182 28.6
Sp4g01890 Schrenkiella parvula HOM05D000754 ORTHO05D000169 5.8e-07 58.5 215 27.9
SpUn0042_0040 Schrenkiella parvula HOM05D000754 ORTHO05D000169 5.8e-07 58.5 215 27.9
Aa31LG6G14610 Aethionema arabicum HOM05D000754 ORTHO05D000169 9.9e-07 57.8 210 29.5
BolC1t00145H Brassica oleracea HOM05D000754 ORTHO05D000169 1.3e-06 57.4 140 28.6
CSS0026493 Camellia sinensis var. sinensis HOM05D000754 ORTHO05D000169 1.3e-06 57.4 182 28.0
Lsat_1_v5_gn_3_86301 Lactuca sativa HOM05D000754 ORTHO05D000169 1.3e-06 57.4 129 31.8
BcaC03g18357 Brassica carinata HOM05D000754 ORTHO05D000169 1.7e-06 57.0 76 38.2
Solyc02g092090.3 Solanum lycopersicum HOM05D016759 ORTHO05D000169 1.7e-06 57.0 208 39.9
Aa31LG4G18250 Aethionema arabicum HOM05D000754 ORTHO05D000169 2.2e-06 56.6 181 27.1
BolC2t12498H Brassica oleracea HOM05D000754 ORTHO05D000169 2.2e-06 56.6 187 35.3
Thhalv10027117m.g Eutrema salsugineum HOM05D000754 ORTHO05D000169 2.2e-06 56.6 218 28.4
DCAR_025821 Daucus carota HOM05D000754 ORTHO05D000169 2.9e-06 56.2 192 27.6
Peaxi162Scf00548g00014 Petunia axillaris HOM05D000754 ORTHO05D000169 2.9e-06 56.2 70 38.6
Sp2g28950 Schrenkiella parvula HOM05D000754 ORTHO05D000169 2.9e-06 56.2 183 36.1
A02p44090 Brassica napus HOM05D000754 ORTHO05D000169 3.8e-06 55.8 190 32.6
BraA02t09332Z Brassica rapa HOM05D000754 ORTHO05D000169 3.8e-06 55.8 190 32.6
Hma1.2p1_0424F.1_g150490 Hydrangea macrophylla HOM05D000754 ORTHO05D000169 3.8e-06 55.8 179 27.4
PGSC0003DMG400021431 Solanum tuberosum HOM05D016759 ORTHO05D000169 3.8e-06 55.8 214 39.7
Nitab4.5_0000142g0350 Nicotiana tabacum HOM05D016759 ORTHO05D000169 4.9e-06 55.5 72 43.1
AT2G22850 Arabidopsis thaliana HOM05D000754 ORTHO05D000169 8.4e-06 54.7 214 26.2
BcaB02g09902 Brassica carinata HOM05D000754 ORTHO05D000169 8.4e-06 54.7 76 36.8
Thhalv10000309m.g Eutrema salsugineum HOM05D000754 ORTHO05D000169 8.4e-06 54.7 60 45.0
Lj4P165T20 Lonicera japonica HOM05D000754 ORTHO05D000169 8.4e-06 54.7 76 40.8


User provided reference genes

Program Settings