Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_22071_v3 Cicer arietinum L. HOM05D007324 ORTHO05D007884 2.2e-47 192.2 117 100.0
TPR.G29033 Trifolium pratense HOM05D007324 ORTHO05D007884 1.6e-29 132.9 124 77.4
Psat4g078840 Pisum sativum HOM05D007324 ORTHO05D007884 2.4e-25 119.0 120 63.3
Glyma.17G155000 Glycine max HOM05D007324 ORTHO05D007884 2.3e-23 112.5 132 53.0
Medtr4g098480 Medicago truncatula HOM05D007324 ORTHO05D007884 2.5e-22 109.0 168 45.2
Glyma.05G112000 Glycine max HOM05D007324 ORTHO05D007884 8.0e-21 104.0 132 50.8
arahy.Tifrunner.gnm1.ann1.0E68DR Arachis hypogaea HOM05D007324 ORTHO05D007884 3.1e-20 102.1 126 54.8
arahy.Tifrunner.gnm1.ann1.69TWVD Arachis hypogaea HOM05D007324 ORTHO05D007884 3.1e-20 102.1 126 54.8
Lj4g0022663 Lotus japonicus HOM05D007324 ORTHO05D007884 2.0e-19 99.4 125 64.0
Phvul.003G230300 Phaseolus vulgaris HOM05D007324 ORTHO05D007884 1.3e-18 96.7 113 53.1
Actinidia14815 Actinidia chinensis HOM05D007324 ORTHO05D007884 4.1e-17 91.7 114 51.8
Lalb_Chr16g0386011 Lupinus albus HOM05D007324 ORTHO05D007884 5.4e-17 91.3 117 52.1
Lj2A242T77 Lonicera japonica HOM05D007324 ORTHO05D007884 2.1e-16 89.4 117 51.3
PGR042G1904 Punica granatum HOM05D007324 ORTHO05D007884 1.3e-15 86.7 120 47.5
Ciclev10033018m.g Citrus clementina HOM05D007324 ORTHO05D007884 1.1e-14 83.6 138 43.5
CSS0008196 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 2.5e-14 82.4 118 53.4
CSS0048146 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 4.3e-14 81.6 118 52.5
ECA240G0465 Erigeron canadensis HOM05D007324 ORTHO05D007884 9.5e-14 80.5 133 42.9
HanXRQChr02g0043531 Helianthus annuus HOM05D007324 ORTHO05D007884 1.2e-13 80.1 104 49.0
Sopen06g021310 Solanum pennellii HOM05D007324 ORTHO05D007884 4.7e-13 78.2 123 45.5
Solyc06g061110.2 Solanum lycopersicum HOM05D007324 ORTHO05D007884 6.2e-13 77.8 123 44.7
Eucgr.E00290 Eucalyptus grandis HOM05D007324 ORTHO05D007884 1.1e-12 77.0 131 44.3
Atru.chr6.1738 Acer truncatum HOM05D007324 ORTHO05D007884 1.4e-12 76.6 109 45.0
HanXRQChr03g0084061 Helianthus annuus HOM05D007324 ORTHO05D007884 2.3e-12 75.9 125 41.6
PGSC0003DMG400002093 Solanum tuberosum HOM05D007324 ORTHO05D007884 2.3e-12 75.9 120 46.7
PSO478G0244 Papaver somniferum HOM05D007324 ORTHO05D007884 2.0e-11 72.8 82 52.4
Lsat_1_v5_gn_6_78560 Lactuca sativa HOM05D007324 ORTHO05D007884 4.4e-11 71.6 146 37.0
PSO782G2910 Papaver somniferum HOM05D007324 ORTHO05D007884 1.3e-10 70.1 82 51.2
Haze_08257 Corylus avellana HOM05D007324 ORTHO05D007884 2.2e-10 69.3 88 48.9
Migut.E01386 Erythranthe guttata HOM05D007324 ORTHO05D007884 3.7e-10 68.6 107 43.0
Cfa012419 Carpinus fangiana HOM05D007324 ORTHO05D007884 6.4e-10 67.8 106 52.8
PSO782G1330 Papaver somniferum HOM05D007324 ORTHO05D007884 3.2e-09 65.5 74 51.4
Thhalv10009848m.g Eutrema salsugineum HOM05D007324 ORTHO05D007884 7.1e-09 64.3 113 42.5
CiPaw.11G092000 Carya illinoinensis HOM05D007324 ORTHO05D007884 1.2e-08 63.5 122 41.0
CsaV3_3G001850 Cucumis sativus L. HOM05D007324 ORTHO05D007884 1.6e-08 63.2 105 41.9
TWI81G0167 Tripterygium wilfordii HOM05D007324 ORTHO05D007884 1.6e-08 63.2 109 42.2
Actinidia09218 Actinidia chinensis HOM05D007324 ORTHO05D007884 2.1e-08 62.8 113 54.9
Gohir.A08G157700 Gossypium hirsutum HOM05D007324 ORTHO05D007884 2.1e-08 62.8 108 39.8
Gohir.D08G178000 Gossypium hirsutum HOM05D007324 ORTHO05D007884 2.7e-08 62.4 108 38.9
A08p09020 Brassica napus HOM05D007324 ORTHO05D007884 3.5e-08 62.0 77 48.1
BraA08t32903Z Brassica rapa HOM05D007324 ORTHO05D007884 3.5e-08 62.0 77 48.1
Gorai.004G186200 Gossypium raimondii HOM05D007324 ORTHO05D007884 3.5e-08 62.0 108 38.9
Rhsim07G0125700 Rhododendron simsii HOM05D007324 ORTHO05D007884 3.5e-08 62.0 114 43.0
CAN.G201.20 Capsicum annuum HOM05D007324 ORTHO05D007884 4.6e-08 61.6 130 43.1
SGA_v2.0_scaffold144G35830 Striga asiatica HOM05D007324 ORTHO05D007884 7.8e-08 60.8 108 44.4
MBI04_g22943_MAGBIO Magnolia biondii HOM05D007324 ORTHO05D007884 1.0e-07 60.5 74 58.1
Oeu047787.1 Olea europaea HOM05D007324 ORTHO05D007884 1.3e-07 60.1 110 42.7
Peaxi162Scf00460g00044 Petunia axillaris HOM05D007324 ORTHO05D007884 1.3e-07 60.1 105 55.2
BolC8t47935H Brassica oleracea HOM05D007324 ORTHO05D007884 6.6e-07 57.8 77 46.8
Manes.15G168800 Manihot esculenta HOM05D007324 ORTHO05D007884 6.6e-07 57.8 72 54.2
Hma1.2p1_0585F.1_g183650 Hydrangea macrophylla HOM05D007324 ORTHO05D007884 3.3e-06 55.5 86 58.1
Cpa.g.sc18.65 Carica papaya HOM05D007324 ORTHO05D007884 4.3e-06 55.1 93 43.0
MD06G1032700 Malus domestica HOM05D007324 ORTHO05D007884 9.5e-06 53.9 110 40.0
Prupe.5G039400 Prunus persica HOM05D007324 ORTHO05D007884 9.5e-06 53.9 47 66.0


User provided reference genes

Program Settings