Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_22032_v3 Cicer arietinum L. HOM05D005771 ORTHO05D007173 3.6e-197 691.4 360 100.0
TPR.G11182 Trifolium pratense HOM05D005771 ORTHO05D007173 2.8e-165 585.5 400 78.8
Medtr4g099070 Medicago truncatula HOM05D005771 ORTHO05D007173 8.2e-165 583.9 362 85.6
Phvul.003G227100 Phaseolus vulgaris HOM05D005771 ORTHO05D007173 3.7e-141 505.4 360 75.8
Glyma.17G150800 Glycine max HOM05D005771 ORTHO05D007173 7.7e-139 497.7 353 74.5
Glyma.05G068200 Glycine max HOM05D005771 ORTHO05D007173 1.1e-134 483.8 366 72.1
Lj4g0020972 Lotus japonicus HOM05D005771 ORTHO05D007173 1.8e-127 459.9 369 68.8
Lalb_Chr16g0386311 Lupinus albus HOM05D005771 ORTHO05D007173 2.0e-126 456.4 363 70.5
Lalb_Chr05g0220751 Lupinus albus HOM05D005771 ORTHO05D007173 1.2e-123 447.2 358 66.5
Psat4g077240 Pisum sativum HOM05D005771 ORTHO05D007173 9.4e-121 437.6 263 87.8
arahy.Tifrunner.gnm1.ann1.2CCA8K Arachis hypogaea HOM05D005771 ORTHO05D007173 1.0e-119 434.1 360 66.1
arahy.Tifrunner.gnm1.ann1.X1SA4Y Arachis hypogaea HOM05D005771 ORTHO05D007173 1.0e-119 434.1 360 66.1
VMungo0251G2395 Vigna mungo HOM05D005771 ORTHO05D007173 2.1e-112 409.8 293 75.1
Lj2g0023107 Lotus japonicus HOM05D005771 ORTHO05D007173 3.6e-112 409.1 340 65.6
Cfa012362 Carpinus fangiana HOM05D005771 ORTHO05D007173 2.3e-103 379.8 344 61.0
CiPaw.11G085900 Carya illinoinensis HOM05D005771 ORTHO05D007173 7.0e-100 368.2 344 60.2
Prupe.5G050200 Prunus persica HOM05D005771 ORTHO05D007173 1.7e-98 363.6 349 57.3
QL12p007731 Quercus lobata HOM05D005771 ORTHO05D007173 3.0e-98 362.8 343 56.6
MD06G1043400 Malus domestica HOM05D005771 ORTHO05D007173 2.5e-97 359.8 371 55.0
Potri.003G085901 Populus trichocarpa HOM05D005771 ORTHO05D007173 3.6e-96 355.9 366 56.0
Potri.001G148500 Populus trichocarpa HOM05D005771 ORTHO05D007173 1.4e-95 354.0 367 54.8
Haze_08321 Corylus avellana HOM05D005771 ORTHO05D007173 3.1e-95 352.8 402 52.5
RcHm_v2.0_Chr7g0207891 Rosa chinensis HOM05D005771 ORTHO05D007173 5.2e-95 352.1 347 56.2
ClCG10G001970 Citrullus lanatus HOM05D005771 ORTHO05D007173 3.7e-93 345.9 361 54.8
PGR031G0896 Punica granatum HOM05D005771 ORTHO05D007173 9.2e-92 341.3 362 52.2
Dinv25170 Davidia involucrata HOM05D005771 ORTHO05D007173 1.2e-91 340.9 370 53.0
CiPaw.12G058800 Carya illinoinensis HOM05D005771 ORTHO05D007173 2.7e-91 339.7 367 54.8
MD16G1267400 Malus domestica HOM05D005771 ORTHO05D007173 4.6e-91 339.0 371 52.3
Sed0018056 Sechium edule HOM05D005771 ORTHO05D007173 4.6e-91 339.0 377 51.5
TAR629G1255 Trochodendron aralioides HOM05D005771 ORTHO05D007173 1.7e-90 337.0 347 53.6
Gohir.D05G283033 Gossypium hirsutum HOM05D005771 ORTHO05D007173 3.0e-90 336.3 343 53.9
FvH4_5g20870 Fragaria vesca HOM05D005771 ORTHO05D007173 3.9e-90 335.9 347 53.9
CANSAT21G2176 Cannabis sativa HOM05D005771 ORTHO05D007173 6.6e-90 335.1 344 53.8
Manes.15G171600 Manihot esculenta HOM05D005771 ORTHO05D007173 6.6e-90 335.1 371 53.1
Hma1.2p1_0414F.1_g147560 Hydrangea macrophylla HOM05D005771 ORTHO05D007173 2.5e-89 333.2 339 55.8
Atru.chr9.1139 Acer truncatum HOM05D005771 ORTHO05D007173 3.3e-89 332.8 346 55.8
Gorai.009G296800 Gossypium raimondii HOM05D005771 ORTHO05D007173 9.5e-89 331.3 343 53.4
Gohir.A05G281200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 6.2e-88 328.6 343 53.4
FAN18G3681 Fragaria x ananassa HOM05D005771 ORTHO05D007173 1.4e-87 327.4 359 52.6
Thecc.10G165100 Theobroma cacao HOM05D005771 ORTHO05D007173 1.4e-87 327.4 345 54.8
FAN08G3334 Fragaria x ananassa HOM05D005771 ORTHO05D007173 1.8e-87 327.0 357 52.4
CsaV3_3G002100 Cucumis sativus L. HOM05D005771 ORTHO05D007173 3.1e-87 326.2 402 49.8
Ciclev10020716m.g Citrus clementina HOM05D005771 ORTHO05D007173 5.2e-87 325.5 373 53.9
Actinidia31481 Actinidia chinensis HOM05D005771 ORTHO05D007173 1.5e-86 323.9 337 52.5
FAN04G1778 Fragaria x ananassa HOM05D005771 ORTHO05D007173 1.3e-85 320.9 382 49.7
Duzib106G1532 Durio zibethinus HOM05D005771 ORTHO05D007173 6.4e-85 318.5 348 52.6
Nn6g33714 Nelumbo nucifera HOM05D005771 ORTHO05D007173 1.6e-83 313.9 352 50.0
MELO3C013882.2 Cucumis melo HOM05D005771 ORTHO05D007173 1.7e-82 310.5 425 46.4
Eucgr.D02148 Eucalyptus grandis HOM05D005771 ORTHO05D007173 3.9e-82 309.3 368 49.2
TWI81G0410 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 7.3e-81 305.1 357 51.3
Actinidia10872 Actinidia chinensis HOM05D005771 ORTHO05D007173 1.6e-80 303.9 362 48.9
COL.COLO4_05118 Corchorus olitorius HOM05D005771 ORTHO05D007173 2.8e-80 303.1 343 49.6
TWI60G1113 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 4.7e-80 302.4 360 51.1
Gorai.011G213100 Gossypium raimondii HOM05D005771 ORTHO05D007173 8.1e-80 301.6 341 48.7
Gohir.A10G183200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 4.0e-79 299.3 341 49.3
Gohir.D10G190000 Gossypium hirsutum HOM05D005771 ORTHO05D007173 8.9e-79 298.1 342 48.5
Hund11296 Selenicereus undatus HOM05D005771 ORTHO05D007173 1.2e-78 297.7 341 49.9
Sc01g0007800 Simmondsia chinensis HOM05D005771 ORTHO05D007173 2.0e-78 297.0 361 50.4
Oeu006260.1 Olea europaea HOM05D005771 ORTHO05D007173 9.9e-78 294.7 365 48.5
Aqoxy3G02583 Aquilegia oxysepala HOM05D005771 ORTHO05D007173 2.4e-76 290.0 349 49.3
Cc08_g01580 Coffea canephora HOM05D005771 ORTHO05D007173 3.2e-76 289.7 365 46.8
Sopen08g026040 Solanum pennellii HOM05D005771 ORTHO05D007173 1.6e-75 287.3 337 47.2
Sabra03G0055800 Salix brachista HOM05D005771 ORTHO05D007173 3.5e-75 286.2 410 46.1
Solyc08g077450.4 Solanum lycopersicum HOM05D005771 ORTHO05D007173 3.5e-75 286.2 337 47.2
Nitab4.5_0001444g0090 Nicotiana tabacum HOM05D005771 ORTHO05D007173 1.7e-74 283.9 366 47.5
CSS0003087 Camellia sinensis var. sinensis HOM05D005771 ORTHO05D007173 2.3e-74 283.5 338 48.5
Nitab4.5_0001708g0070 Nicotiana tabacum HOM05D005771 ORTHO05D007173 6.6e-74 282.0 371 47.7
SGA_v2.0_scaffold20G09242 Striga asiatica HOM05D005771 ORTHO05D007173 6.2e-72 275.4 372 46.2
Migut.E00807 Erythranthe guttata HOM05D005771 ORTHO05D007173 3.4e-70 269.6 366 44.8
Migut.E00856 Erythranthe guttata HOM05D005771 ORTHO05D007173 4.4e-70 269.2 366 45.6
Thhalv10008194m.g Eutrema salsugineum HOM05D005771 ORTHO05D007173 2.2e-69 266.9 342 46.2
Cpa.g.sc2.371 Carica papaya HOM05D005771 ORTHO05D007173 2.9e-69 266.5 302 51.3
CDE02G0742 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 2.9e-69 266.5 366 45.4
AT1G32730 Arabidopsis thaliana HOM05D005771 ORTHO05D007173 2.1e-67 260.4 357 44.8
CARHR032110 Cardamine hirsuta HOM05D005771 ORTHO05D007173 3.5e-67 259.6 291 51.5
AL1G47010 Arabidopsis lyrata HOM05D005771 ORTHO05D007173 6.0e-67 258.8 352 44.6
MSTRG.1962 Avicennia marina HOM05D005771 ORTHO05D007173 3.0e-66 256.5 340 46.5
Aa31LG2G13250 Aethionema arabicum HOM05D005771 ORTHO05D007173 2.5e-65 253.4 356 45.2
DCAR_000726 Daucus carota HOM05D005771 ORTHO05D007173 9.6e-65 251.5 349 44.7
Carub.0001s3106 Capsella rubella HOM05D005771 ORTHO05D007173 4.8e-64 249.2 289 50.5
Rhsim07G0120600 Rhododendron simsii HOM05D005771 ORTHO05D007173 4.8e-64 249.2 433 42.0
Sabra01G0116900 Salix brachista HOM05D005771 ORTHO05D007173 8.1e-64 248.4 302 51.7
C05p32200 Brassica napus HOM05D005771 ORTHO05D007173 2.4e-63 246.9 353 44.8
BolC5t31952H Brassica oleracea HOM05D005771 ORTHO05D007173 2.4e-63 246.9 353 44.8
HanXRQChr12g0368601 Helianthus annuus HOM05D005771 ORTHO05D007173 2.6e-62 243.4 367 43.6
THA.LOC104812740 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 1.7e-61 240.7 358 43.9
EL10Ac5g12212 Beta vulgaris HOM05D005771 ORTHO05D007173 9.3e-60 235.0 341 45.2
PSO063G1478 Papaver somniferum HOM05D005771 ORTHO05D007173 2.7e-59 233.4 364 41.8
Peaxi162Scf00084g00314 Petunia axillaris HOM05D005771 ORTHO05D007173 2.7e-59 233.4 363 42.1
CDE11G1022 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 7.9e-59 231.9 376 40.7
GSVIVG01013265001 Vitis vinifera HOM05D005771 ORTHO05D007173 7.9e-59 231.9 156 74.4
PSO782G3090 Papaver somniferum HOM05D005771 ORTHO05D007173 1.8e-58 230.7 366 41.5
TPR.G12459 Trifolium pratense HOM05D005771 ORTHO05D007173 2.3e-58 230.3 147 83.0
DCAR_000728 Daucus carota HOM05D005771 ORTHO05D007173 3.9e-58 229.6 276 48.9
ECA233G5206 Erigeron canadensis HOM05D005771 ORTHO05D007173 1.1e-57 228.0 364 40.7
THA.LOC104807943 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 1.9e-57 227.3 358 42.2
Sp1g28240 Schrenkiella parvula HOM05D005771 ORTHO05D007173 2.5e-57 226.9 359 40.4
vmacro14112 Vaccinium macrocarpon HOM05D005771 ORTHO05D007173 9.6e-57 224.9 273 49.5
HPP92_007338 Vanilla planifolia HOM05D005771 ORTHO05D007173 3.7e-56 223.0 348 41.1
Lsat_1_v5_gn_6_67960 Lactuca sativa HOM05D005771 ORTHO05D007173 5.8e-54 215.7 300 45.0
BcaC05g27301 Brassica carinata HOM05D005771 ORTHO05D007173 7.6e-54 215.3 365 41.1
Sabra01G0118400 Salix brachista HOM05D005771 ORTHO05D007173 1.4e-52 211.1 299 46.2
BcaC05g27831 Brassica carinata HOM05D005771 ORTHO05D007173 2.7e-51 206.8 283 45.6
C05p38290 Brassica napus HOM05D005771 ORTHO05D007173 2.7e-51 206.8 283 45.6
BolC5t32561H Brassica oleracea HOM05D005771 ORTHO05D007173 2.7e-51 206.8 283 45.6
ATR0829G207 Amborella trichopoda HOM05D005771 ORTHO05D007173 1.8e-50 204.1 367 37.3
AUR62018795 Chenopodium quinoa HOM05D005771 ORTHO05D007173 1.9e-49 200.7 308 43.5
AUR62007206 Chenopodium quinoa HOM05D005771 ORTHO05D007173 2.5e-49 200.3 308 43.2
Os08g0129500 Oryza sativa ssp. japonica HOM05D005771 ORTHO05D007173 3.3e-49 199.9 374 38.0
Oeu039354.1 Olea europaea HOM05D005771 ORTHO05D007173 1.3e-48 198.0 258 49.2
A05p24640 Brassica napus HOM05D005771 ORTHO05D007173 1.6e-48 197.6 303 43.6
BraA05t21350Z Brassica rapa HOM05D005771 ORTHO05D007173 1.6e-48 197.6 303 43.6
FAN13G3323 Fragaria x ananassa HOM05D005771 ORTHO05D007173 2.8e-48 196.8 349 41.0
Zm00001eb261700 Zea mays HOM05D005771 ORTHO05D007173 3.1e-47 193.4 347 36.3
unitig_21.g20376 Utricularia gibba HOM05D005771 ORTHO05D007173 1.7e-45 187.6 382 37.2
Psat4g077280 Pisum sativum HOM05D005771 ORTHO05D007173 1.8e-42 177.6 99 85.9
Ah.07g199650 Amaranthus hybridus HOM05D005771 ORTHO05D007173 4.5e-38 162.9 391 32.5
SEGI_22059 Sequoiadendron giganteum HOM05D005771 ORTHO05D000001 6.1e-27 125.9 294 34.0
Zm00001eb173270 Zea mays HOM05D005771 ORTHO05D007173 1.1e-17 95.1 223 31.8
arahy.Tifrunner.gnm1.ann1.ARXY04 Arachis hypogaea HOM05D005771 ORTHO05D007173 3.3e-17 93.6 61 73.8
AagrBONN_evm.TU.Sc2ySwM_117.836 Anthoceros agrestis HOM05D005771 ORTHO05D007173 1.8e-15 87.8 336 26.5
Pp3c2_10410 Physcomitrium patens HOM05D005771 ORTHO05D007173 5.3e-15 86.3 421 24.5
Mapoly0082s0082 Marchantia polymorpha HOM05D005771 ORTHO05D007173 7.0e-15 85.9 344 26.7
SEGI_34267 Sequoiadendron giganteum HOM05D005771 ORTHO05D007173 1.4e-10 71.6 42 71.4
TAR636G0006 Trochodendron aralioides HOM05D005771 ORTHO05D007173 4.0e-10 70.1 45 75.6
SMO347G0210 Selaginella moellendorffii HOM05D005771 ORTHO05D007173 8.3e-08 62.4 365 23.8
VMungo0251G1933 Vigna mungo HOM05D005771 ORTHO05D007173 9.1e-07 58.9 57 61.4


User provided reference genes

Program Settings