Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_22029_v3 Cicer arietinum L. HOM05D007758 ORTHO05D009788 9.8e-25 115.9 56 100.0
Medtr4g099120 Medicago truncatula HOM05D007758 ORTHO05D009788 4.5e-22 107.1 56 89.3
TPR.G17254 Trifolium pratense HOM05D007758 ORTHO05D009788 4.5e-22 107.1 56 91.1
Ca_28157_v3 Cicer arietinum L. HOM05D007758 ORTHO05D009788 1.7e-21 105.1 58 93.1
Medtr3g053460 Medicago truncatula HOM05D007758 ORTHO05D009788 2.3e-21 104.8 56 87.5
Lj4g0024059 Lotus japonicus HOM05D007758 ORTHO05D009788 1.9e-20 101.7 50 94.0
Phvul.003G226800 Phaseolus vulgaris HOM05D007758 ORTHO05D009788 7.3e-20 99.8 55 83.6
Psat4g076760 Pisum sativum HOM05D007758 ORTHO05D009788 1.8e-18 95.1 47 95.7
arahy.Tifrunner.gnm1.ann1.24R365 Arachis hypogaea HOM05D007758 ORTHO05D009788 2.3e-18 94.7 50 88.0
arahy.Tifrunner.gnm1.ann1.EY31BM Arachis hypogaea HOM05D007758 ORTHO05D009788 2.3e-18 94.7 50 88.0
Ca_03905_v3 Cicer arietinum L. HOM05D000421 ORTHO05D009788 5.2e-18 93.6 47 97.9
Glyma.17G150000 Glycine max HOM05D007758 ORTHO05D009788 6.8e-18 93.2 58 79.3
Lalb_Chr09g0329711 Lupinus albus HOM05D007758 ORTHO05D009788 6.8e-18 93.2 55 80.0
Glyma.05G067900 Glycine max HOM05D007758 ORTHO05D009788 2.0e-17 91.7 55 78.2
Ciclev10023239m.g Citrus clementina HOM05D007758 ORTHO05D009788 5.8e-17 90.1 56 75.0
Manes.15G171100 Manihot esculenta HOM05D007758 ORTHO05D009788 5.8e-17 90.1 57 80.7
Lsat_1_v5_gn_6_90760 Lactuca sativa HOM05D007758 ORTHO05D009788 7.5e-17 89.7 60 76.7
CiPaw.12G057000 Carya illinoinensis HOM05D007758 ORTHO05D009788 3.7e-16 87.4 60 73.3
CANSAT21G1691 Cannabis sativa HOM05D007758 ORTHO05D009788 6.4e-16 86.7 59 74.6
PSO782G2991 Papaver somniferum HOM05D007758 ORTHO05D009788 8.3e-16 86.3 56 73.2
Hma1.2p1_1673F.1_g296900 Hydrangea macrophylla HOM05D007758 ORTHO05D009788 1.4e-15 85.5 58 74.1
Nn1g00706 Nelumbo nucifera HOM05D007758 ORTHO05D009788 1.9e-15 85.1 57 78.9
THA.LOC104814457 Tarenaya hassleriana HOM05D007758 ORTHO05D009788 1.9e-15 85.1 58 74.1
TAR633G2270 Trochodendron aralioides HOM05D007758 ORTHO05D009788 2.4e-15 84.7 48 83.3
CSS0049692 Camellia sinensis var. sinensis HOM05D007758 ORTHO05D009788 4.1e-15 84.0 58 74.1
Oeu035101.1 Olea europaea HOM05D007758 ORTHO05D009788 5.4e-15 83.6 62 71.0
Prupe.5G051100 Prunus persica HOM05D007758 ORTHO05D009788 5.4e-15 83.6 60 71.7
RcHm_v2.0_Chr6g0259711 Rosa chinensis HOM05D007758 ORTHO05D009788 5.4e-15 83.6 57 75.4
DCAR_008312 Daucus carota HOM05D007758 ORTHO05D009788 9.2e-15 82.8 58 74.1
MD04G1056100 Malus domestica HOM05D007758 ORTHO05D009788 9.2e-15 82.8 56 75.0
AL7G37620 Arabidopsis lyrata HOM05D007758 ORTHO05D009788 1.6e-14 82.0 58 72.4
Hma1.2p1_0414F.1_g147490 Hydrangea macrophylla HOM05D007758 ORTHO05D009788 1.6e-14 82.0 49 75.5
GSVIVG01013273001 Vitis vinifera HOM05D007758 ORTHO05D009788 1.6e-14 82.0 54 75.9
Sed0000899 Sechium edule HOM05D007758 ORTHO05D009788 2.0e-14 81.6 48 75.0
TAR629G0116 Trochodendron aralioides HOM05D007758 ORTHO05D009788 2.0e-14 81.6 54 72.2
ClCG09G012550 Citrullus lanatus HOM05D007758 ORTHO05D009788 2.7e-14 81.3 47 76.6
C07p48590 Brassica napus HOM05D007758 ORTHO05D009788 3.5e-14 80.9 58 69.0
BolC7t45367H Brassica oleracea HOM05D007758 ORTHO05D009788 3.5e-14 80.9 58 69.0
CSS0001994 Camellia sinensis var. sinensis HOM05D007758 ORTHO05D009788 4.6e-14 80.5 47 80.9
Peaxi162Scf00715g00026 Petunia axillaris HOM05D007758 ORTHO05D009788 4.6e-14 80.5 60 71.7
PGR042G0139 Punica granatum HOM05D007758 ORTHO05D009788 4.6e-14 80.5 59 69.5
Cfa012357 Carpinus fangiana HOM05D007758 ORTHO05D009788 6.0e-14 80.1 60 65.0
CsaV3_3G049700 Cucumis sativus L. HOM05D007758 ORTHO05D009788 6.0e-14 80.1 61 67.2
TWI60G0956 Tripterygium wilfordii HOM05D007758 ORTHO05D009788 6.0e-14 80.1 56 71.4
BraA08t33271Z Brassica rapa HOM05D007758 ORTHO05D009788 7.8e-14 79.7 58 70.7
Migut.E00814 Erythranthe guttata HOM05D007758 ORTHO05D009788 7.8e-14 79.7 54 72.2
Gohir.D09G192200 Gossypium hirsutum HOM05D007758 ORTHO05D009788 1.0e-13 79.3 61 68.9
Gorai.006G215000 Gossypium raimondii HOM05D007758 ORTHO05D009788 1.0e-13 79.3 61 68.9
COL.COLO4_06700 Corchorus olitorius HOM05D007758 ORTHO05D009788 1.3e-13 79.0 48 77.1
Thhalv10026742m.g Eutrema salsugineum HOM05D007758 ORTHO05D009788 1.3e-13 79.0 58 69.0
BcaB04g18382 Brassica carinata HOM05D007758 ORTHO05D009788 1.7e-13 78.6 59 67.8
MELO3C003346.2 Cucumis melo HOM05D007758 ORTHO05D009788 1.7e-13 78.6 47 74.5
Atru.chr9.1149 Acer truncatum HOM05D007758 ORTHO05D009788 2.3e-13 78.2 49 71.4
BcaC07g38037 Brassica carinata HOM05D007758 ORTHO05D009788 2.3e-13 78.2 56 69.6
A08p12870 Brassica napus HOM05D007758 ORTHO05D009788 2.3e-13 78.2 56 69.6
BolC8t48433H Brassica oleracea HOM05D007758 ORTHO05D009788 2.3e-13 78.2 56 69.6
FAN13G2273 Fragaria x ananassa HOM05D007758 ORTHO05D009788 2.3e-13 78.2 53 73.6
FAN18G3236 Fragaria x ananassa HOM05D007758 ORTHO05D009788 2.3e-13 78.2 53 73.6
Hund11300 Selenicereus undatus HOM05D007758 ORTHO05D009788 2.3e-13 78.2 48 77.1
AT4G17085 Arabidopsis thaliana HOM05D007758 ORTHO05D009788 3.9e-13 77.4 58 69.0
Oeu017314.1 Olea europaea HOM05D007758 ORTHO05D009788 3.9e-13 77.4 55 72.7
A03p50300 Brassica napus HOM05D007758 ORTHO05D009788 5.0e-13 77.0 58 67.2
BraA03t14119Z Brassica rapa HOM05D007758 ORTHO05D009788 5.0e-13 77.0 58 67.2
CARHR223670 Cardamine hirsuta HOM05D007758 ORTHO05D009788 5.0e-13 77.0 58 69.0
Cc08_g01520 Coffea canephora HOM05D007758 ORTHO05D009788 5.0e-13 77.0 55 72.7
Zm00001eb180740 Zea mays HOM05D007758 ORTHO05D009788 5.0e-13 77.0 51 66.7
Carub.0007s2429 Capsella rubella HOM05D007758 ORTHO05D009788 8.6e-13 76.3 58 67.2
PGSC0003DMG400001836 Solanum tuberosum HOM05D007758 ORTHO05D009788 8.6e-13 76.3 56 69.6
CAN.G1445.11 Capsicum annuum HOM05D007758 ORTHO05D009788 1.1e-12 75.9 59 66.1
Gohir.A09G197600 Gossypium hirsutum HOM05D007758 ORTHO05D009788 1.1e-12 75.9 48 77.1
BcaC06g33532 Brassica carinata HOM05D007758 ORTHO05D009788 1.5e-12 75.5 55 67.3
BcaNung04665 Brassica carinata HOM05D007758 ORTHO05D009788 1.5e-12 75.5 55 67.3
CiPaw.09G190000 Carya illinoinensis HOM05D007758 ORTHO05D009788 3.3e-12 74.3 60 65.0
CiPaw.14G095700 Carya illinoinensis HOM05D007758 ORTHO05D009788 3.3e-12 74.3 60 63.3
Thecc.03G237200 Theobroma cacao HOM05D007758 ORTHO05D009788 4.3e-12 73.9 61 63.9
CiPaw.02G038300 Carya illinoinensis HOM05D007758 ORTHO05D009788 7.3e-12 73.2 60 65.0
CiPaw.10G048600 Carya illinoinensis HOM05D007758 ORTHO05D009788 9.5e-12 72.8 60 65.0
CiPaw.14G095500 Carya illinoinensis HOM05D007758 ORTHO05D009788 1.2e-11 72.4 60 63.3
Potri.003G085400 Populus trichocarpa HOM05D007758 ORTHO05D009788 4.7e-11 70.5 73 53.4
FAN08G1799 Fragaria x ananassa HOM05D007758 ORTHO05D009788 6.2e-11 70.1 53 71.7
Haze_08336 Corylus avellana HOM05D007758 ORTHO05D009788 8.0e-11 69.7 41 75.6
RcHm_v2.0_Chr7g0205921 Rosa chinensis HOM05D007758 ORTHO05D009788 4.4e-09 63.9 59 61.0
TWI81G0786 Tripterygium wilfordii HOM05D007758 ORTHO05D009788 3.7e-08 60.8 55 56.4
Nitab4.5_0010949g0010 Nicotiana tabacum HOM05D007758 ORTHO05D009788 4.9e-08 60.5 36 77.8
BolC7t45365H Brassica oleracea HOM05D007758 ORTHO05D009788 1.4e-07 58.9 37 73.0
unitig_744.g24437 Utricularia gibba HOM05D007758 ORTHO05D009788 5.4e-07 57.0 93 43.0
ECA240G4699 Erigeron canadensis HOM05D007758 ORTHO05D009788 7.8e-06 53.1 59 44.1


User provided reference genes

Program Settings