Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21975_v3 Cicer arietinum L. HOM05D006567 ORTHO05D009430 6.2e-216 753.8 374 100.0
Medtr4g100760 Medicago truncatula HOM05D006567 ORTHO05D009430 9.0e-199 696.8 374 92.5
TPR.G37608 Trifolium pratense HOM05D006567 ORTHO05D009430 7.6e-198 693.7 368 92.7
Psat4g072680 Pisum sativum HOM05D006567 ORTHO05D009430 8.4e-197 690.3 368 92.7
Lj4g0021343 Lotus japonicus HOM05D006567 ORTHO05D009430 1.2e-195 686.4 368 92.1
Glyma.05G061300 Glycine max HOM05D006567 ORTHO05D009430 1.0e-194 683.3 368 90.8
VMungo0251G1330 Vigna mungo HOM05D006567 ORTHO05D009430 5.6e-193 677.6 371 89.2
Lalb_Chr05g0221201 Lupinus albus HOM05D006567 ORTHO05D009430 3.1e-191 671.8 364 90.4
arahy.Tifrunner.gnm1.ann1.69E4XE Arachis hypogaea HOM05D006567 ORTHO05D009430 5.3e-191 671.0 366 89.6
arahy.Tifrunner.gnm1.ann1.E0WBQ7 Arachis hypogaea HOM05D006567 ORTHO05D009430 6.9e-191 670.6 368 89.1
Phvul.003G221900 Phaseolus vulgaris HOM05D006567 ORTHO05D009430 4.9e-189 664.5 374 87.7
QL12p011664 Quercus lobata HOM05D006567 ORTHO05D009430 8.4e-189 663.7 362 90.3
COL.COLO4_37145 Corchorus olitorius HOM05D006567 ORTHO05D009430 1.8e-186 656.0 362 87.6
Sabra03G0048700 Salix brachista HOM05D006567 ORTHO05D009430 1.9e-185 652.5 362 87.0
TAR636G1533 Trochodendron aralioides HOM05D006567 ORTHO05D009430 2.5e-185 652.1 363 87.9
Cfa015824 Carpinus fangiana HOM05D006567 ORTHO05D009430 7.4e-185 650.6 369 86.7
MD04G1062400 Malus domestica HOM05D006567 ORTHO05D009430 1.3e-184 649.8 362 88.4
Potri.003G078500 Populus trichocarpa HOM05D006567 ORTHO05D009430 1.4e-183 646.4 368 85.6
Atru.chr9.1289 Acer truncatum HOM05D006567 ORTHO05D009430 3.1e-183 645.2 362 87.0
vmacro00188 Vaccinium macrocarpon HOM05D006567 ORTHO05D009430 4.0e-183 644.8 365 84.9
CANSAT21G0369 Cannabis sativa HOM05D006567 ORTHO05D009430 1.2e-182 643.3 363 86.0
Thecc.03G249000 Theobroma cacao HOM05D006567 ORTHO05D009430 2.6e-182 642.1 361 86.4
Duzib084G0744 Durio zibethinus HOM05D006567 ORTHO05D009430 4.5e-182 641.3 362 85.9
PGR031G0713 Punica granatum HOM05D006567 ORTHO05D009430 4.5e-182 641.3 360 86.7
RcHm_v2.0_Chr7g0203711 Rosa chinensis HOM05D006567 ORTHO05D009430 7.6e-182 640.6 369 85.6
FAN08G1209 Fragaria x ananassa HOM05D006567 ORTHO05D009430 1.7e-181 639.4 362 86.2
CSS0024870 Camellia sinensis var. sinensis HOM05D006567 ORTHO05D009430 3.8e-181 638.3 362 85.9
FAN18G0654 Fragaria x ananassa HOM05D006567 ORTHO05D009430 6.5e-181 637.5 361 86.1
MSTRG.12113 Avicennia marina HOM05D006567 ORTHO05D009430 8.4e-181 637.1 363 84.0
Aqoxy7G00822 Aquilegia oxysepala HOM05D006567 ORTHO05D009430 1.1e-180 636.7 361 85.3
FAN04G2727 Fragaria x ananassa HOM05D006567 ORTHO05D009430 1.9e-180 636.0 362 85.9
TWI81G0123 Tripterygium wilfordii HOM05D006567 ORTHO05D009430 7.1e-180 634.0 363 85.7
Gorai.008G234200 Gossypium raimondii HOM05D006567 ORTHO05D009430 9.3e-180 633.6 362 85.4
Actinidia14413 Actinidia chinensis HOM05D006567 ORTHO05D009430 1.2e-179 633.3 363 84.6
Gohir.D12G218600 Gossypium hirsutum HOM05D006567 ORTHO05D009430 2.7e-179 632.1 362 84.8
Gohir.A12G216000 Gossypium hirsutum HOM05D006567 ORTHO05D009430 3.5e-179 631.7 368 84.2
SalBow6G6157 Salvia bowleyana HOM05D006567 ORTHO05D009430 6.0e-179 630.9 362 83.4
CsaV3_5G004320 Cucumis sativus L. HOM05D006567 ORTHO05D009430 1.8e-178 629.4 369 82.4
Cc08_g12240 Coffea canephora HOM05D006567 ORTHO05D009430 2.3e-178 629.0 363 83.5
Ciclev10020637m.g Citrus clementina HOM05D006567 ORTHO05D009430 3.9e-178 628.2 364 84.1
Hund11604 Selenicereus undatus HOM05D006567 ORTHO05D009430 5.1e-178 627.9 368 82.1
Eucgr.D02095 Eucalyptus grandis HOM05D006567 ORTHO05D009430 6.7e-178 627.5 366 83.9
MBI04_g09522_MAGBIO Magnolia biondii HOM05D006567 ORTHO05D009430 1.5e-177 626.3 364 83.0
MELO3C005521.2 Cucumis melo HOM05D006567 ORTHO05D009430 2.5e-177 625.5 369 81.6
Nn1g00949 Nelumbo nucifera HOM05D006567 ORTHO05D009430 5.7e-177 624.4 362 83.1
Cpa.g.sc29.179 Carica papaya HOM05D006567 ORTHO05D009430 9.7e-177 623.6 367 83.1
HanXRQChr13g0417851 Helianthus annuus HOM05D006567 ORTHO05D009430 3.7e-176 621.7 365 80.0
Lsat_1_v5_gn_6_92541 Lactuca sativa HOM05D006567 ORTHO05D009430 6.3e-176 620.9 365 80.8
ECA240G4587 Erigeron canadensis HOM05D006567 ORTHO05D009430 1.8e-175 619.4 362 80.7
DCAR_004966 Daucus carota HOM05D006567 ORTHO05D009430 5.3e-175 617.8 361 82.8
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 9.0e-175 617.1 362 82.3
Haze_00669 Corylus avellana HOM05D006567 ORTHO05D009430 9.0e-175 617.1 393 80.2
Peaxi162Scf00209g00122 Petunia axillaris HOM05D006567 ORTHO05D009430 2.0e-174 615.9 362 82.0
PGSC0003DMG400004822 Solanum tuberosum HOM05D006567 ORTHO05D009430 3.4e-174 615.1 362 81.8
Migut.A01121 Erythranthe guttata HOM05D006567 ORTHO05D009430 4.5e-174 614.8 365 82.2
EL10Ac5g12369 Beta vulgaris HOM05D006567 ORTHO05D009430 8.5e-173 610.5 363 82.4
EL10Ac5g12374 Beta vulgaris HOM05D006567 ORTHO05D009430 1.1e-172 610.1 363 82.4
Solyc08g078460.3 Solanum lycopersicum HOM05D006567 ORTHO05D009430 1.4e-172 609.8 362 80.9
Sopen08g026950 Solanum pennellii HOM05D006567 ORTHO05D009430 1.4e-172 609.8 362 80.9
ClCG01G004160 Citrullus lanatus HOM05D006567 ORTHO05D009430 5.5e-172 607.8 371 80.6
CAN.G1178.26 Capsicum annuum HOM05D006567 ORTHO05D009430 3.0e-170 602.1 362 79.8
AUR62019967 Chenopodium quinoa HOM05D006567 ORTHO05D009430 6.7e-170 600.9 352 82.1
CARHR223980 Cardamine hirsuta HOM05D006567 ORTHO05D009430 1.5e-166 589.7 362 78.5
Carub.0007s2404 Capsella rubella HOM05D006567 ORTHO05D009430 5.9e-166 587.8 362 78.7
SGA_v2.0_scaffold26G11306 Striga asiatica HOM05D006567 ORTHO05D009430 5.9e-166 587.8 376 76.6
Nitab4.5_0001381g0120 Nicotiana tabacum HOM05D006567 ORTHO05D009430 7.7e-166 587.4 364 79.1
PSO170G1323 Papaver somniferum HOM05D006567 ORTHO05D009430 7.7e-166 587.4 381 75.6
PSO017G4082 Papaver somniferum HOM05D006567 ORTHO05D009430 1.0e-165 587.0 381 75.9
ATR0057G105 Amborella trichopoda HOM05D006567 ORTHO05D009430 2.9e-165 585.5 363 76.9
THA.LOC104806666 Tarenaya hassleriana HOM05D006567 ORTHO05D009430 5.0e-165 584.7 363 78.2
AT4G17370 Arabidopsis thaliana HOM05D006567 ORTHO05D009430 6.5e-165 584.3 362 78.5
BcaNung03466 Brassica carinata HOM05D006567 ORTHO05D009430 3.2e-164 582.0 368 76.1
Thhalv10025513m.g Eutrema salsugineum HOM05D006567 ORTHO05D009430 1.2e-163 580.1 360 77.5
BolC7t45378H Brassica oleracea HOM05D006567 ORTHO05D009430 1.0e-162 577.0 368 75.5
Sp7g16810 Schrenkiella parvula HOM05D006567 ORTHO05D009430 6.7e-162 574.3 362 77.1
A03p50390 Brassica napus HOM05D006567 ORTHO05D009430 8.8e-162 573.9 362 76.0
BraA03t14129Z Brassica rapa HOM05D006567 ORTHO05D009430 2.6e-161 572.4 362 76.0
Nitab4.5_0002289g0070 Nicotiana tabacum HOM05D006567 ORTHO05D009430 5.7e-161 571.2 363 77.4
AL7G37340 Arabidopsis lyrata HOM05D006567 ORTHO05D009430 1.7e-160 569.7 375 75.2
HPP92_025881 Vanilla planifolia HOM05D006567 ORTHO05D009430 1.7e-160 569.7 364 75.8
SEGI_34288 Sequoiadendron giganteum HOM05D006567 ORTHO05D009430 1.2e-158 563.5 365 74.2
Aa31LG1G23140 Aethionema arabicum HOM05D006567 ORTHO05D009430 1.7e-157 559.7 365 74.2
AUR62007104 Chenopodium quinoa HOM05D006567 ORTHO05D009430 5.5e-156 554.7 357 77.0
unitig_899.g15594 Utricularia gibba HOM05D006567 ORTHO05D009430 1.8e-151 539.7 361 73.1
CiPaw.11G081200 Carya illinoinensis HOM05D006567 ORTHO05D009430 2.0e-150 536.2 300 88.3
Os08g0148267 Oryza sativa ssp. japonica HOM05D006567 ORTHO05D009430 1.2e-145 520.4 303 83.8
Manes.01G082300 Manihot esculenta HOM05D006567 ORTHO05D009430 1.4e-143 513.5 284 88.7
Prupe.5G066000 Prunus persica HOM05D006567 ORTHO05D009430 7.7e-142 507.7 268 90.7
AagrBONN_evm.TU.Sc2ySwM_228.3639 Anthoceros agrestis HOM05D006567 ORTHO05D009430 1.0e-141 507.3 369 66.7
Dinv39160 Davidia involucrata HOM05D006567 ORTHO05D009430 2.5e-140 502.7 284 86.3
SMO228G0171 Selaginella moellendorffii HOM05D006567 ORTHO05D009430 7.0e-135 484.6 363 66.1
Mapoly0040s0044 Marchantia polymorpha HOM05D006567 ORTHO05D009430 2.3e-133 479.6 363 63.6
Pp3c4_15440 Physcomitrium patens HOM05D006567 ORTHO05D009430 1.1e-132 477.2 374 63.6
Sed0022818 Sechium edule HOM05D006567 ORTHO05D009430 1.0e-130 470.7 267 84.6
Zm00001eb416490 Zea mays HOM05D006567 ORTHO05D009430 1.4e-127 460.3 306 74.5
Lj2C221T14 Lonicera japonica HOM05D006567 ORTHO05D009430 2.3e-114 416.4 241 84.6
GSVIVG01004725001 Vitis vinifera HOM05D006567 ORTHO05D009430 3.1e-114 416.0 227 88.5
FvH4_5g19170 Fragaria vesca HOM05D006567 ORTHO05D009430 4.4e-113 412.1 222 87.4
Rhsim09G0000200 Rhododendron simsii HOM05D006567 ORTHO05D009430 9.8e-113 411.0 349 61.6
Sc07g0009260 Simmondsia chinensis HOM05D006567 ORTHO05D009430 1.6e-110 403.7 223 85.7
Glyma.17G143100 Glycine max HOM05D006567 ORTHO05D009430 4.4e-89 332.4 184 87.5
BcaC06g33541 Brassica carinata HOM05D006567 ORTHO05D009430 7.4e-68 261.9 212 63.7
QL08p055973 Quercus lobata HOM05D006567 ORTHO05D015939 7.4e-52 208.8 122 81.1
QL08p052096 Quercus lobata HOM05D006567 ORTHO05D015939 1.7e-51 207.6 111 88.3
FvH4_5g07380 Fragaria vesca HOM05D006567 ORTHO05D015939 7.7e-49 198.7 113 81.4
FAN04G0922 Fragaria x ananassa HOM05D006567 ORTHO05D015939 2.1e-46 190.7 127 73.2
FvH4_3g36620 Fragaria vesca HOM05D006567 ORTHO05D015939 4.7e-46 189.5 115 79.1
FAN09G0929 Fragaria x ananassa HOM05D006567 ORTHO05D015939 6.1e-46 189.1 114 78.1
FAN22G0783 Fragaria x ananassa HOM05D006567 ORTHO05D015939 6.1e-46 189.1 114 78.1
FAN27G0484 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.7e-43 181.0 127 70.9
BcaC06g33542 Brassica carinata HOM05D006567 ORTHO05D015939 8.5e-32 142.1 96 68.8
Rhsim09G0000100 Rhododendron simsii HOM05D006567 ORTHO05D009430 1.5e-31 141.4 95 74.7
FAN28G1973 Fragaria x ananassa HOM05D006567 ORTHO05D015939 4.1e-18 96.7 69 65.2
TPR.G2696 Trifolium pratense HOM05D006567 ORTHO05D411767 7.2e-15 85.9 54 77.8
TPR.G40300 Trifolium pratense HOM05D006567 ORTHO05D412752 1.2e-14 85.1 54 77.8
TPR.G24425 Trifolium pratense HOM05D006567 ORTHO05D411483 2.1e-14 84.3 54 75.9
TPR.G2679 Trifolium pratense HOM05D006567 ORTHO05D412848 1.5e-12 78.2 54 72.2
Pp3s96_60 Physcomitrium patens HOM05D016182 ORTHO05D028865 8.3e-11 72.4 326 23.9
AL7G37260 Arabidopsis lyrata HOM05D006567 ORTHO05D015939 2.9e-08 63.9 43 67.4
EL10Ac4g09527 Beta vulgaris HOM05D006567 ORTHO05D010541 5.0e-08 63.2 63 54.0
Ca_29050_v3 Cicer arietinum L. HOM05D006567 ORTHO05D018939 9.5e-07 58.9 206 27.2


User provided reference genes

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