Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21971_v3 Cicer arietinum L. HOM05D006762 ORTHO05D003505 1.8e-36 155.6 90 100.0
TPR.G37627 Trifolium pratense HOM05D006762 ORTHO05D003505 1.1e-30 136.3 92 91.3
Medtr4g100820 Medicago truncatula HOM05D006762 ORTHO05D003505 1.8e-28 129.0 91 85.7
Psat4g072480 Pisum sativum HOM05D006762 ORTHO05D003505 1.8e-28 129.0 90 87.8
Lalb_Chr16g0386731 Lupinus albus HOM05D006762 ORTHO05D003505 4.0e-28 127.9 90 83.3
Lj4g0004620 Lotus japonicus HOM05D006762 ORTHO05D003505 1.3e-26 122.9 90 78.9
Phvul.003G221200 Phaseolus vulgaris HOM05D006762 ORTHO05D003505 2.4e-25 118.6 90 78.9
Glyma.05G060100 Glycine max HOM05D006762 ORTHO05D003505 3.2e-25 118.2 87 80.5
Glyma.17G142500 Glycine max HOM05D006762 ORTHO05D003505 3.9e-23 111.3 88 77.3
Lalb_Chr09g0330061 Lupinus albus HOM05D006762 ORTHO05D003505 1.1e-22 109.8 88 73.9
arahy.Tifrunner.gnm1.ann1.A5XQNM Arachis hypogaea HOM05D006762 ORTHO05D003505 1.5e-19 99.4 90 67.8
arahy.Tifrunner.gnm1.ann1.QP3VPD Arachis hypogaea HOM05D006762 ORTHO05D003505 4.9e-18 94.4 90 66.7
Actinidia27471 Actinidia chinensis HOM05D006762 ORTHO05D003505 4.2e-17 91.3 103 62.1
vmacro21548 Vaccinium macrocarpon HOM05D006762 ORTHO05D003505 4.2e-17 91.3 103 61.2
Glyma.18G109000 Glycine max HOM05D006762 ORTHO05D003505 5.4e-17 90.9 86 69.8
QL12p012005 Quercus lobata HOM05D006762 ORTHO05D003505 5.4e-17 90.9 93 67.7
Rhsim07G0109700 Rhododendron simsii HOM05D006762 ORTHO05D003505 3.5e-16 88.2 98 63.3
Prupe.5G068300 Prunus persica HOM05D006762 ORTHO05D003505 4.6e-16 87.8 91 67.0
Lj8A263T41 Lonicera japonica HOM05D006762 ORTHO05D003505 6.0e-16 87.4 104 62.5
GSVIVG01006992001 Vitis vinifera HOM05D006762 ORTHO05D003505 6.0e-16 87.4 101 57.4
arahy.Tifrunner.gnm1.ann1.D6ADVN Arachis hypogaea HOM05D006762 ORTHO05D003505 1.3e-15 86.3 87 63.2
MD04G1063100 Malus domestica HOM05D006762 ORTHO05D003505 1.7e-15 85.9 96 62.5
arahy.Tifrunner.gnm1.ann1.YI4YN9 Arachis hypogaea HOM05D006762 ORTHO05D003505 3.0e-15 85.1 93 62.4
Glyma.17G210100 Glycine max HOM05D006762 ORTHO05D003505 3.9e-15 84.7 86 66.3
GSVIVG01004713001 Vitis vinifera HOM05D006762 ORTHO05D003505 3.9e-15 84.7 101 56.4
TAR629G0824 Trochodendron aralioides HOM05D006762 ORTHO05D003505 5.1e-15 84.3 101 58.4
Cpa.g.sc29.168 Carica papaya HOM05D006762 ORTHO05D003505 8.7e-15 83.6 99 60.6
FAN04G0434 Fragaria x ananassa HOM05D006762 ORTHO05D003505 1.5e-14 82.8 90 62.2
FAN08G1018 Fragaria x ananassa HOM05D006762 ORTHO05D003505 1.9e-14 82.4 90 62.2
FAN18G2762 Fragaria x ananassa HOM05D006762 ORTHO05D003505 1.9e-14 82.4 90 62.2
PGSC0003DMG400004817 Solanum tuberosum HOM05D006762 ORTHO05D003505 1.9e-14 82.4 97 62.9
Gohir.A08G169800 Gossypium hirsutum HOM05D006762 ORTHO05D003505 3.3e-14 81.6 100 59.0
Gohir.D08G188100 Gossypium hirsutum HOM05D006762 ORTHO05D003505 3.3e-14 81.6 100 59.0
RcHm_v2.0_Chr7g0203511 Rosa chinensis HOM05D006762 ORTHO05D003505 4.3e-14 81.3 95 61.1
arahy.Tifrunner.gnm1.ann1.8JK4ZI Arachis hypogaea HOM05D006762 ORTHO05D003505 5.6e-14 80.9 91 61.5
CANSAT21G1567 Cannabis sativa HOM05D006762 ORTHO05D003505 7.3e-14 80.5 90 63.3
COL.COLO4_37166 Corchorus olitorius HOM05D006762 ORTHO05D003505 7.3e-14 80.5 101 56.4
Manes.01G081200 Manihot esculenta HOM05D006762 ORTHO05D003505 7.3e-14 80.5 98 61.2
Ciclev10023003m.g Citrus clementina HOM05D006762 ORTHO05D003505 9.6e-14 80.1 96 59.4
FAN13G0097 Fragaria x ananassa HOM05D000502 ORTHO05D000356 9.6e-14 80.1 94 60.6
CiPaw.12G051800 Carya illinoinensis HOM05D006762 ORTHO05D003505 1.2e-13 79.7 99 55.6
PGR031G2035 Punica granatum HOM05D006762 ORTHO05D003505 1.2e-13 79.7 94 59.6
Dinv39153 Davidia involucrata HOM05D000502 ORTHO05D000356 2.1e-13 79.0 86 60.5
Duzib084G1100 Durio zibethinus HOM05D006762 ORTHO05D003505 2.8e-13 78.6 100 55.0
Gorai.004G198000 Gossypium raimondii HOM05D006762 ORTHO05D003505 2.8e-13 78.6 100 58.0
CAN.G1058.38 Capsicum annuum HOM05D006762 ORTHO05D003505 3.6e-13 78.2 97 59.8
BcaC06g31382 Brassica carinata HOM05D006762 ORTHO05D003505 6.2e-13 77.4 102 53.9
Sopen08g027040 Solanum pennellii HOM05D006762 ORTHO05D003505 8.1e-13 77.0 95 61.1
TWI81G0572 Tripterygium wilfordii HOM05D006762 ORTHO05D003505 1.4e-12 76.3 99 54.5
Aa31csc22G110 Aethionema arabicum HOM05D006762 ORTHO05D003505 1.8e-12 75.9 102 52.9
Duzib205G1027 Durio zibethinus HOM05D006762 ORTHO05D003505 1.8e-12 75.9 101 53.5
Solyc08g078560.3 Solanum lycopersicum HOM05D006762 ORTHO05D003505 1.8e-12 75.9 97 56.7
Thhalv10001082m.g Eutrema salsugineum HOM05D006762 ORTHO05D003505 2.4e-12 75.5 102 54.9
Potri.001G333800 Populus trichocarpa HOM05D006762 ORTHO05D003505 3.1e-12 75.1 97 58.8
FvH4_5g19060 Fragaria vesca HOM05D006762 ORTHO05D003505 4.0e-12 74.7 92 57.6
HanXRQChr03g0087771 Helianthus annuus HOM05D006762 ORTHO05D003505 4.0e-12 74.7 92 57.6
SalBow6G0204 Salvia bowleyana HOM05D006762 ORTHO05D003505 4.0e-12 74.7 101 57.4
Aqoxy7G00783 Aquilegia oxysepala HOM05D006762 ORTHO05D003505 5.3e-12 74.3 103 54.4
BcaC06g31384 Brassica carinata HOM05D006762 ORTHO05D003505 5.3e-12 74.3 101 53.5
CiPaw.11G079800 Carya illinoinensis HOM05D006762 ORTHO05D003505 5.3e-12 74.3 101 55.4
SalBow6G1716 Salvia bowleyana HOM05D006762 ORTHO05D003505 6.9e-12 73.9 101 55.4
Nn6g33933 Nelumbo nucifera HOM05D006762 ORTHO05D003505 9.0e-12 73.6 104 53.8
Sabra16G0215100 Salix brachista HOM05D006762 ORTHO05D003505 9.0e-12 73.6 97 56.7
Thecc.03G250100 Theobroma cacao HOM05D006762 ORTHO05D003505 9.0e-12 73.6 99 54.5
A02p31340 Brassica napus HOM05D006762 ORTHO05D003505 1.2e-11 73.2 98 54.1
BraA02t08136Z Brassica rapa HOM05D006762 ORTHO05D003505 1.2e-11 73.2 98 54.1
BcaC03g16962 Brassica carinata HOM05D006762 ORTHO05D003505 1.5e-11 72.8 102 52.9
C02p48680 Brassica napus HOM05D006762 ORTHO05D003505 2.0e-11 72.4 101 52.5
BolC2t10960H Brassica oleracea HOM05D006762 ORTHO05D003505 2.0e-11 72.4 101 52.5
Sed0021009 Sechium edule HOM05D006762 ORTHO05D003505 2.0e-11 72.4 93 55.9
AL7G37400 Arabidopsis lyrata HOM05D006762 ORTHO05D003505 2.6e-11 72.0 92 55.4
A06p45070 Brassica napus HOM05D006762 ORTHO05D003505 2.6e-11 72.0 102 52.0
TWI60G1284 Tripterygium wilfordii HOM05D006762 ORTHO05D003505 2.6e-11 72.0 99 54.5
CsaV3_3G002630 Cucumis sativus L. HOM05D006762 ORTHO05D003505 3.4e-11 71.6 95 53.7
Sp2g12170 Schrenkiella parvula HOM05D006762 ORTHO05D003505 4.4e-11 71.2 101 52.5
Oeu020431.1 Olea europaea HOM05D006762 ORTHO05D003505 5.8e-11 70.9 92 56.5
CARHR173910 Cardamine hirsuta HOM05D006762 ORTHO05D003505 7.6e-11 70.5 101 52.5
ClCG10G002600 Citrullus lanatus HOM05D006762 ORTHO05D003505 7.6e-11 70.5 93 53.8
AL8G10530 Arabidopsis lyrata HOM05D006762 ORTHO05D003505 9.9e-11 70.1 100 55.0
BcaC06g34251 Brassica carinata HOM05D006762 ORTHO05D003505 9.9e-11 70.1 102 51.0
C07p31100 Brassica napus HOM05D006762 ORTHO05D003505 9.9e-11 70.1 102 51.0
CSS0021998 Camellia sinensis var. sinensis HOM05D006762 ORTHO05D003505 1.3e-10 69.7 87 58.6
Lsat_1_v5_gn_6_90840 Lactuca sativa HOM05D006762 ORTHO05D003505 1.3e-10 69.7 94 56.4
MELO3C013933.2 Cucumis melo HOM05D006762 ORTHO05D003505 1.7e-10 69.3 93 53.8
MSTRG.12104 Avicennia marina HOM05D006762 ORTHO05D003505 2.2e-10 68.9 96 57.3
Hund14549 Selenicereus undatus HOM05D006762 ORTHO05D003505 2.2e-10 68.9 94 53.2
Migut.A01106 Erythranthe guttata HOM05D006762 ORTHO05D003505 4.9e-10 67.8 99 54.5
BraA06t27376Z Brassica rapa HOM05D006762 ORTHO05D003505 6.4e-10 67.4 100 51.0
Carub.0007s2409 Capsella rubella HOM05D006762 ORTHO05D003505 1.4e-09 66.2 90 55.6
Carub.0008s0032 Capsella rubella HOM05D006762 ORTHO05D003505 1.4e-09 66.2 96 54.2
BolC7t43652H Brassica oleracea HOM05D006762 ORTHO05D003505 1.9e-09 65.9 100 50.0
THA.LOC104812806 Tarenaya hassleriana HOM05D006762 ORTHO05D003505 1.9e-09 65.9 88 54.5
Cc08_g12340 Coffea canephora HOM05D006762 ORTHO05D003505 2.4e-09 65.5 103 51.5
Manes.02G040300 Manihot esculenta HOM05D006762 ORTHO05D003505 2.4e-09 65.5 100 51.0
CDE12G0636 Ceratophyllum demersum HOM05D006762 ORTHO05D003505 3.2e-09 65.1 97 47.4
ECA240G1429 Erigeron canadensis HOM05D006762 ORTHO05D003505 4.2e-09 64.7 91 54.9
Nitab4.5_0000882g0040 Nicotiana tabacum HOM05D006762 ORTHO05D003505 5.4e-09 64.3 97 51.5
Potri.017G068600 Populus trichocarpa HOM05D006762 ORTHO05D003505 1.2e-08 63.2 100 51.0
AT5G47455 Arabidopsis thaliana HOM05D006762 ORTHO05D003505 1.6e-08 62.8 97 52.6
SalBow4G0096 Salvia bowleyana HOM05D006762 ORTHO05D003505 2.1e-08 62.4 88 55.7
SalBow4G2872 Salvia bowleyana HOM05D006762 ORTHO05D003505 2.1e-08 62.4 88 55.7
AT4G17310 Arabidopsis thaliana HOM05D006762 ORTHO05D003505 7.8e-08 60.5 93 51.6
ATR0317G117 Amborella trichopoda HOM05D006762 ORTHO05D003505 1.7e-07 59.3 91 48.4
Nitab4.5_0001501g0020 Nicotiana tabacum HOM05D006762 ORTHO05D003505 5.1e-07 57.8 89 50.6
TAR625G0309 Trochodendron aralioides HOM05D003477 ORTHO05D004043 6.6e-07 57.4 92 47.8
FAN27G3027 Fragaria x ananassa HOM05D007429 ORTHO05D003505 1.1e-06 56.6 89 43.8
Lj1g0025254 Lotus japonicus HOM05D007429 ORTHO05D003505 1.1e-06 56.6 84 51.2
FAN20G1676 Fragaria x ananassa HOM05D002792 ORTHO05D003039 1.5e-06 56.2 70 48.6
Nn6g35292 Nelumbo nucifera HOM05D007429 ORTHO05D003505 1.5e-06 56.2 87 47.1
Nn5g30458 Nelumbo nucifera HOM05D003477 ORTHO05D004043 1.9e-06 55.8 87 46.0
Ca_15587_v3 Cicer arietinum L. HOM05D002792 ORTHO05D003039 2.5e-06 55.5 45 66.7
Manes.16G075000 Manihot esculenta HOM05D007429 ORTHO05D003505 2.5e-06 55.5 78 52.6
Actinidia16453 Actinidia chinensis HOM05D003477 ORTHO05D004043 3.3e-06 55.1 51 60.8
Actinidia21247 Actinidia chinensis HOM05D003477 ORTHO05D004043 3.3e-06 55.1 51 60.8
Duzib187G1405 Durio zibethinus HOM05D007429 ORTHO05D003505 3.3e-06 55.1 70 54.3
MD15G1092600 Malus domestica HOM05D007429 ORTHO05D003505 3.3e-06 55.1 91 45.1
PSO210G4486 Papaver somniferum HOM05D003477 ORTHO05D004043 3.3e-06 55.1 93 47.3
QL04p035820 Quercus lobata HOM05D006762 ORTHO05D003505 3.3e-06 55.1 93 47.3
Ciclev10010039m.g Citrus clementina HOM05D007429 ORTHO05D003505 5.6e-06 54.3 66 51.5
Gohir.D05G048100 Gossypium hirsutum HOM05D007429 ORTHO05D003505 5.6e-06 54.3 76 51.3
Gorai.009G049400 Gossypium raimondii HOM05D007429 ORTHO05D003505 5.6e-06 54.3 76 51.3
RcHm_v2.0_Chr6g0306421 Rosa chinensis HOM05D007429 ORTHO05D003505 5.6e-06 54.3 89 46.1
EL10Ac2g04004 Beta vulgaris HOM05D007429 ORTHO05D003505 9.6e-06 53.5 82 48.8
CDE04G0461 Ceratophyllum demersum HOM05D005822 ORTHO05D007267 9.6e-06 53.5 53 56.6


User provided reference genes

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