Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21955_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 1.0e-82 310.1 159 100.0
Ca_22220_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 1.1e-68 263.5 159 89.3
Psat4g070160 Pisum sativum HOM05D006632 ORTHO05D008224 2.3e-63 245.7 151 83.4
TPR.G37669 Trifolium pratense HOM05D006632 ORTHO05D008224 1.2e-59 233.4 151 81.5
Medtr4g101100 Medicago truncatula HOM05D006632 ORTHO05D008224 2.0e-59 232.6 157 79.6
Phvul.003G219500 Phaseolus vulgaris HOM05D006632 ORTHO05D008224 1.3e-53 213.4 151 78.1
Glyma.05G058200 Glycine max HOM05D006632 ORTHO05D008224 2.9e-53 212.2 151 78.8
VMungo0251G2371 Vigna mungo HOM05D006632 ORTHO05D008224 1.4e-52 209.9 151 77.5
Lalb_Chr05g0225741 Lupinus albus HOM05D006632 ORTHO05D008224 1.8e-52 209.5 153 75.8
Lj4g0001078 Lotus japonicus HOM05D006632 ORTHO05D008224 3.2e-52 208.8 153 74.5
arahy.Tifrunner.gnm1.ann1.E5X9TE Arachis hypogaea HOM05D006632 ORTHO05D008224 9.2e-52 207.2 153 74.5
arahy.Tifrunner.gnm1.ann1.UQJ0AM Arachis hypogaea HOM05D006632 ORTHO05D008224 1.2e-51 206.8 153 74.5
Haze_07882 Corylus avellana HOM05D006632 ORTHO05D008224 2.5e-49 199.1 151 71.5
Thecc.03G254100 Theobroma cacao HOM05D006632 ORTHO05D008224 5.6e-49 198.0 148 71.6
QL12p012693 Quercus lobata HOM05D006632 ORTHO05D008224 7.3e-49 197.6 154 70.8
Ciclev10022042m.g Citrus clementina HOM05D006632 ORTHO05D008224 1.6e-48 196.4 158 70.3
MELO3C013948.2 Cucumis melo HOM05D006632 ORTHO05D008224 1.6e-48 196.4 149 72.5
Gohir.A12G219900 Gossypium hirsutum HOM05D006632 ORTHO05D008224 1.6e-48 196.4 155 71.6
Cfa012746 Carpinus fangiana HOM05D006632 ORTHO05D008224 2.8e-48 195.7 151 70.2
CiPaw.11G152400 Carya illinoinensis HOM05D006632 ORTHO05D008224 3.6e-48 195.3 154 70.8
ClCG10G002780 Citrullus lanatus HOM05D006632 ORTHO05D008224 3.6e-48 195.3 149 71.1
Gohir.D12G222100 Gossypium hirsutum HOM05D006632 ORTHO05D008224 3.6e-48 195.3 155 71.6
Gorai.008G238100 Gossypium raimondii HOM05D006632 ORTHO05D008224 3.6e-48 195.3 155 71.6
RcHm_v2.0_Chr7g0202881 Rosa chinensis HOM05D006632 ORTHO05D008224 1.8e-47 193.0 151 68.9
Sed0019633 Sechium edule HOM05D006632 ORTHO05D008224 3.1e-47 192.2 149 69.8
vmacro14091 Vaccinium macrocarpon HOM05D006632 ORTHO05D008224 4.0e-47 191.8 154 68.2
TWI81G0482 Tripterygium wilfordii HOM05D006632 ORTHO05D008224 6.8e-47 191.0 158 67.1
Cc08_g12700 Coffea canephora HOM05D006632 ORTHO05D008224 8.9e-47 190.7 155 67.7
Duzib205G0315 Durio zibethinus HOM05D006632 ORTHO05D008224 2.0e-46 189.5 155 69.7
CANSAT21G1011 Cannabis sativa HOM05D006632 ORTHO05D008224 3.4e-46 188.7 151 68.2
Sopen08g003360 Solanum pennellii HOM05D006632 ORTHO05D008224 4.4e-46 188.3 151 69.5
Carub.0007s2499 Capsella rubella HOM05D006632 ORTHO05D008224 5.8e-46 188.0 152 66.4
Aa31LG2G12620 Aethionema arabicum HOM05D006632 ORTHO05D008224 2.9e-45 185.7 152 65.8
Nitab4.5_0004059g0060 Nicotiana tabacum HOM05D006632 ORTHO05D008224 4.9e-45 184.9 157 65.6
Solyc08g007410.4 Solanum lycopersicum HOM05D006632 ORTHO05D008224 4.9e-45 184.9 151 67.5
FAN13G0450 Fragaria x ananassa HOM05D006632 ORTHO05D008224 6.4e-45 184.5 148 67.6
Oeu062975.1 Olea europaea HOM05D006632 ORTHO05D008224 6.4e-45 184.5 156 66.7
Prupe.5G072600 Prunus persica HOM05D006632 ORTHO05D008224 8.3e-45 184.1 155 65.2
A08p12540 Brassica napus HOM05D006632 ORTHO05D008224 1.1e-44 183.7 148 66.9
BraA08t33245Z Brassica rapa HOM05D006632 ORTHO05D008224 1.1e-44 183.7 148 66.9
CARHR222910 Cardamine hirsuta HOM05D006632 ORTHO05D008224 1.1e-44 183.7 152 67.1
Potri.003G111100 Populus trichocarpa HOM05D006632 ORTHO05D008224 1.1e-44 183.7 151 65.6
AT4G16510 Arabidopsis thaliana HOM05D006632 ORTHO05D008224 1.4e-44 183.3 152 65.1
Sabra03G0077000 Salix brachista HOM05D006632 ORTHO05D008224 1.4e-44 183.3 152 67.1
Potri.008G135980 Populus trichocarpa HOM05D006632 ORTHO05D008224 1.9e-44 183.0 151 66.2
Hma1.2p1_0916F.1_g236520 Hydrangea macrophylla HOM05D006632 ORTHO05D008224 2.4e-44 182.6 156 66.7
AL7G38450 Arabidopsis lyrata HOM05D006632 ORTHO05D008224 3.2e-44 182.2 152 65.8
BcaC07g37993 Brassica carinata HOM05D006632 ORTHO05D008224 3.2e-44 182.2 153 66.0
FAN18G2132 Fragaria x ananassa HOM05D006632 ORTHO05D008224 4.1e-44 181.8 151 66.2
GSVIVG01001305001 Vitis vinifera HOM05D006632 ORTHO05D008224 4.1e-44 181.8 153 66.0
Nitab4.5_0001707g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 9.2e-44 180.6 165 63.6
Actinidia05199 Actinidia chinensis HOM05D006632 ORTHO05D008224 1.6e-43 179.9 156 64.7
PGSC0003DMG400012506 Solanum tuberosum HOM05D006632 ORTHO05D008224 1.6e-43 179.9 151 66.2
MSTRG.25531 Avicennia marina HOM05D006632 ORTHO05D008224 2.0e-43 179.5 153 67.3
Nitab4.5_0000312g0210 Nicotiana tabacum HOM05D006632 ORTHO05D008224 2.0e-43 179.5 149 67.8
THA.LOC104814709 Tarenaya hassleriana HOM05D006632 ORTHO05D008224 2.7e-43 179.1 151 66.9
CsaV3_3G002820 Cucumis sativus L. HOM05D006632 ORTHO05D008224 3.5e-43 178.7 109 79.8
Atru.chr9.1340 Acer truncatum HOM05D006632 ORTHO05D008224 4.6e-43 178.3 156 64.1
Thhalv10026162m.g Eutrema salsugineum HOM05D006632 ORTHO05D008224 4.6e-43 178.3 150 65.3
Nn6g34002 Nelumbo nucifera HOM05D006632 ORTHO05D008224 4.6e-43 178.3 152 65.8
PSO063G6697 Papaver somniferum HOM05D006632 ORTHO05D008224 4.6e-43 178.3 155 63.9
BolC8t48376H Brassica oleracea HOM05D006632 ORTHO05D008224 7.8e-43 177.6 153 65.4
PSO782G3692 Papaver somniferum HOM05D006632 ORTHO05D008224 1.0e-42 177.2 155 63.2
Rhsim07G0107100 Rhododendron simsii HOM05D006632 ORTHO05D008224 1.0e-42 177.2 158 63.9
FAN04G0341 Fragaria x ananassa HOM05D006632 ORTHO05D008224 1.3e-42 176.8 149 65.8
Manes.01G079200 Manihot esculenta HOM05D006632 ORTHO05D008224 1.7e-42 176.4 159 62.9
FAN08G0873 Fragaria x ananassa HOM05D006632 ORTHO05D008224 3.0e-42 175.6 149 65.1
DCAR_027784 Daucus carota HOM05D006632 ORTHO05D008224 3.9e-42 175.3 159 64.2
Lj2A215T22 Lonicera japonica HOM05D006632 ORTHO05D008224 3.9e-42 175.3 149 65.8
CSS0044555 Camellia sinensis var. sinensis HOM05D006632 ORTHO05D008224 1.5e-41 173.3 158 63.9
Sp7g15070 Schrenkiella parvula HOM05D006632 ORTHO05D008224 3.3e-41 172.2 152 63.2
Nitab4.5_0017825g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 5.6e-41 171.4 149 65.8
MD06G1061300 Malus domestica HOM05D006632 ORTHO05D008224 7.3e-41 171.0 155 61.9
SGA_v2.0_scaffold120G32870 Striga asiatica HOM05D006632 ORTHO05D008224 7.3e-41 171.0 153 65.4
Hund14588 Selenicereus undatus HOM05D006632 ORTHO05D008224 9.5e-41 170.6 155 60.6
Lsat_1_v5_gn_6_91561 Lactuca sativa HOM05D006632 ORTHO05D008224 1.2e-40 170.2 147 64.6
Ah.12g056690 Amaranthus hybridus HOM05D006632 ORTHO05D008224 1.6e-40 169.9 152 61.8
SalBow6G7145 Salvia bowleyana HOM05D006632 ORTHO05D008224 2.1e-40 169.5 153 63.4
Aqoxy5G03914 Aquilegia oxysepala HOM05D006632 ORTHO05D008224 2.8e-40 169.1 150 62.0
Migut.A00961 Erythranthe guttata HOM05D006632 ORTHO05D008224 3.1e-39 165.6 162 60.5
PGR042G2887 Punica granatum HOM05D006632 ORTHO05D008224 5.2e-39 164.9 158 58.9
EL10Ac5g13049 Beta vulgaris HOM05D006632 ORTHO05D008224 6.8e-39 164.5 147 61.2
HanXRQChr03g0088651 Helianthus annuus HOM05D006632 ORTHO05D008224 2.6e-38 162.5 147 63.3
CDE02G1947 Ceratophyllum demersum HOM05D006632 ORTHO05D008224 4.4e-38 161.8 107 75.7
CAN.G1227.10 Capsicum annuum HOM05D006632 ORTHO05D008224 7.5e-38 161.0 100 80.0
ECA240G2825 Erigeron canadensis HOM05D006632 ORTHO05D008224 1.3e-37 160.2 153 60.8
AUR62039953 Chenopodium quinoa HOM05D006632 ORTHO05D008224 1.7e-37 159.8 144 60.4
AUR62007500 Chenopodium quinoa HOM05D006632 ORTHO05D008224 3.7e-37 158.7 145 60.7
Eucgr.E00435 Eucalyptus grandis HOM05D006632 ORTHO05D008224 1.9e-36 156.4 166 54.8
ATR0564G418 Amborella trichopoda HOM05D006632 ORTHO05D008224 2.7e-35 152.5 167 54.5
HPP92_014478 Vanilla planifolia HOM05D006632 ORTHO05D008224 1.3e-34 150.2 154 53.2
Rhsim07G0106500 Rhododendron simsii HOM05D006632 ORTHO05D008224 1.7e-34 149.8 225 45.3
unitig_27.g25096 Utricularia gibba HOM05D006632 ORTHO05D008224 8.6e-34 147.5 106 68.9
Os02g0662200 Oryza sativa ssp. japonica HOM05D006632 ORTHO05D008224 1.8e-31 139.8 155 52.9
SMO143G0241 Selaginella moellendorffii HOM05D006632 ORTHO05D008224 3.1e-31 139.0 107 62.6
Dinv39125 Davidia involucrata HOM05D006632 ORTHO05D008224 4.4e-30 135.2 137 58.4
SEGI_31519 Sequoiadendron giganteum HOM05D006632 ORTHO05D008224 5.8e-30 134.8 149 51.0
Mapoly0121s0036 Marchantia polymorpha HOM05D006632 ORTHO05D008224 7.6e-30 134.4 108 62.0
Pp3c24_4050 Physcomitrium patens HOM05D006632 ORTHO05D008224 9.9e-30 134.0 103 64.1
Sc01g0008570 Simmondsia chinensis HOM05D006632 ORTHO05D008224 2.4e-28 129.4 85 75.3
MD00G1115100 Malus domestica HOM05D006632 ORTHO05D008224 3.2e-28 129.0 161 49.1
Zm00001eb249830 Zea mays HOM05D006632 ORTHO05D008224 3.2e-28 129.0 156 51.3
Peaxi162Scf00102g01151 Petunia axillaris HOM05D006632 ORTHO05D008224 1.1e-25 120.6 155 49.7
Dinv21617 Davidia involucrata HOM05D006632 ORTHO05D008224 5.6e-25 118.2 152 50.7
CBR_g26463 Chara braunii HOM05D006632 ORTHO05D008224 1.1e-23 114.0 109 52.3
AagrBONN_evm.TU.Sc2ySwM_117.1014 Anthoceros agrestis HOM05D006632 ORTHO05D008224 2.2e-21 106.3 138 44.2
DCAR_004945 Daucus carota HOM05D006632 ORTHO05D008224 8.4e-21 104.4 152 45.4
Cpa.g.sc276.6 Carica papaya HOM05D006632 ORTHO05D008224 2.1e-19 99.8 108 57.4
FvH4_5g00080 Fragaria vesca HOM05D011292 ORTHO05D013599 1.6e-16 90.1 97 54.6
Cre07.g338250 Chlamydomonas reinhardtii HOM05D006632 ORTHO05D008224 3.6e-16 89.0 109 46.8
MCO15G182 Micromonas commoda HOM05D006632 ORTHO05D008224 1.5e-14 83.6 91 46.2
DCAR_004944 Daucus carota HOM05D006632 ORTHO05D008224 2.0e-14 83.2 97 52.6
C01p26240 Brassica napus HOM05D006632 ORTHO05D008224 2.4e-12 76.3 55 70.9
BolC1t02568H Brassica oleracea HOM05D006632 ORTHO05D008224 2.4e-12 76.3 55 70.9
PRCOL_00001140 Prasinoderma coloniale HOM05D006632 ORTHO05D008224 3.2e-12 75.9 109 39.4
TAR636G0287 Trochodendron aralioides HOM05D006632 ORTHO05D008224 3.2e-12 75.9 99 50.5
A01p20910 Brassica napus HOM05D006632 ORTHO05D008224 7.1e-12 74.7 85 50.6
BraA01t02010Z Brassica rapa HOM05D006632 ORTHO05D008224 2.1e-11 73.2 85 49.4
Potri.001G122501 Populus trichocarpa HOM05D006632 ORTHO05D008224 6.6e-10 68.2 52 61.5


User provided reference genes

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