Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21935_v3 Cicer arietinum L. HOM05D000922 ORTHO05D008200 3.6e-109 398.3 205 100.0
Psat4g058400 Pisum sativum HOM05D000922 ORTHO05D008200 8.4e-98 360.5 205 90.7
Medtr4g105570 Medicago truncatula HOM05D000922 ORTHO05D008200 1.0e-95 353.6 204 89.7
Glyma.17G088100 Glycine max HOM05D000922 ORTHO05D008200 9.6e-94 347.1 205 86.3
Lj4g0019609 Lotus japonicus HOM05D000922 ORTHO05D008200 4.9e-90 334.7 205 82.4
arahy.Tifrunner.gnm1.ann1.RA2V7W Arachis hypogaea HOM05D000922 ORTHO05D008200 5.6e-86 321.2 205 80.5
Lalb_Chr12g0201661 Lupinus albus HOM05D000922 ORTHO05D008200 9.6e-86 320.5 204 79.4
Phvul.003G201800 Phaseolus vulgaris HOM05D000922 ORTHO05D008200 1.3e-85 320.1 205 82.4
VMungo1215G1163 Vigna mungo HOM05D000922 ORTHO05D008200 2.1e-85 319.3 205 82.0
RcHm_v2.0_Chr7g0193351 Rosa chinensis HOM05D000922 ORTHO05D008200 4.0e-84 315.1 198 79.3
CiPaw.11G024500 Carya illinoinensis HOM05D000922 ORTHO05D008200 1.7e-82 309.7 203 78.8
Gohir.A09G171300 Gossypium hirsutum HOM05D000922 ORTHO05D008200 3.8e-82 308.5 197 80.2
Gohir.D09G167000 Gossypium hirsutum HOM05D000922 ORTHO05D008200 8.4e-82 307.4 197 79.7
Gorai.006G188800 Gossypium raimondii HOM05D000922 ORTHO05D008200 8.4e-82 307.4 197 79.7
Prupe.5G171600 Prunus persica HOM05D000922 ORTHO05D008200 1.9e-81 306.2 205 76.6
Nn3g16820 Nelumbo nucifera HOM05D000922 ORTHO05D008200 5.4e-81 304.7 206 76.7
Atru.chr9.2496 Acer truncatum HOM05D000922 ORTHO05D008200 2.1e-80 302.8 206 75.2
arahy.Tifrunner.gnm1.ann1.3C9G4H Arachis hypogaea HOM05D000922 ORTHO05D008200 2.7e-80 302.4 201 77.6
CSS0000249 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D008200 4.6e-80 301.6 199 76.9
COL.COLO4_30070 Corchorus olitorius HOM05D000922 ORTHO05D008200 6.0e-80 301.2 205 77.6
ClCG01G013230 Citrullus lanatus HOM05D000922 ORTHO05D008200 1.3e-79 300.1 200 78.0
Dinv20636 Davidia involucrata HOM05D000922 ORTHO05D008200 1.3e-79 300.1 205 76.1
GSVIVG01007722001 Vitis vinifera HOM05D000922 ORTHO05D008200 3.0e-79 298.9 199 75.4
Manes.14G064200 Manihot esculenta HOM05D000922 ORTHO05D008200 3.9e-79 298.5 202 75.7
MD14G1178100 Malus domestica HOM05D000922 ORTHO05D008200 5.1e-79 298.1 197 77.2
CAN.G1166.6 Capsicum annuum HOM05D000922 ORTHO05D008200 6.7e-79 297.7 204 73.5
Eucgr.G00068 Eucalyptus grandis HOM05D000922 ORTHO05D008200 6.7e-79 297.7 203 74.9
MELO3C002273.2 Cucumis melo HOM05D000922 ORTHO05D008200 8.7e-79 297.4 200 77.0
arahy.Tifrunner.gnm1.ann1.R1G0J4 Arachis hypogaea HOM05D000922 ORTHO05D008200 1.1e-78 297.0 197 77.2
Thecc.03G014600 Theobroma cacao HOM05D000922 ORTHO05D008200 1.1e-78 297.0 197 78.2
MD06G1172200 Malus domestica HOM05D000922 ORTHO05D008200 1.5e-78 296.6 198 76.8
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 2.5e-78 295.8 205 75.1
QL10p010977 Quercus lobata HOM05D000922 ORTHO05D008200 3.3e-78 295.4 204 73.0
TWI39G0231 Tripterygium wilfordii HOM05D000922 ORTHO05D008200 3.3e-78 295.4 205 76.1
Duzib205G0455 Durio zibethinus HOM05D000922 ORTHO05D008200 4.3e-78 295.0 188 79.8
PGSC0003DMG400018154 Solanum tuberosum HOM05D000922 ORTHO05D008200 4.3e-78 295.0 204 73.0
CANSAT80G0818 Cannabis sativa HOM05D000922 ORTHO05D008200 5.6e-78 294.7 197 74.6
CsaV3_1G008590 Cucumis sativus L. HOM05D000922 ORTHO05D008200 7.4e-78 294.3 200 76.5
vmacro19401 Vaccinium macrocarpon HOM05D000922 ORTHO05D008200 7.4e-78 294.3 206 73.8
MSTRG.11466 Avicennia marina HOM05D000922 ORTHO05D008200 1.3e-77 293.5 206 72.8
Sed0005243 Sechium edule HOM05D000922 ORTHO05D008200 1.3e-77 293.5 206 75.7
FAN04G0130 Fragaria x ananassa HOM05D000922 ORTHO05D008200 1.6e-77 293.1 205 73.7
FAN13G3248 Fragaria x ananassa HOM05D000922 ORTHO05D008200 2.8e-77 292.4 205 73.7
DCAR_026150 Daucus carota HOM05D000922 ORTHO05D008200 4.8e-77 291.6 204 74.5
Nitab4.5_0000514g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 4.8e-77 291.6 205 72.2
PGR044G1577 Punica granatum HOM05D000922 ORTHO05D008200 6.2e-77 291.2 199 75.9
Sabra15G0103100 Salix brachista HOM05D000922 ORTHO05D008200 8.1e-77 290.8 186 78.5
FAN18G2418 Fragaria x ananassa HOM05D000922 ORTHO05D008200 1.1e-76 290.4 205 73.2
FAN18G3465 Fragaria x ananassa HOM05D000922 ORTHO05D008200 1.1e-76 290.4 205 73.2
Hund09449 Selenicereus undatus HOM05D000922 ORTHO05D008200 1.4e-76 290.0 191 77.5
Solyc03g112810.3 Solanum lycopersicum HOM05D000922 ORTHO05D008200 1.4e-76 290.0 204 73.0
TAR629G0323 Trochodendron aralioides HOM05D000922 ORTHO05D008200 1.4e-76 290.0 206 73.8
Ciclev10022297m.g Citrus clementina HOM05D000922 ORTHO05D008200 3.1e-76 288.9 204 74.0
FvH4_5g05480 Fragaria vesca HOM05D000922 ORTHO05D008200 5.3e-76 288.1 205 72.7
Lj5C125T23 Lonicera japonica HOM05D000922 ORTHO05D008200 1.2e-75 287.0 206 72.8
SalBow1G6106 Salvia bowleyana HOM05D000922 ORTHO05D008200 1.2e-75 287.0 204 73.0
SalBow5G5253 Salvia bowleyana HOM05D000922 ORTHO05D008200 1.2e-75 287.0 204 73.0
Nitab4.5_0008678g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 1.5e-75 286.6 189 76.7
Haze_07527 Corylus avellana HOM05D000922 ORTHO05D008200 2.6e-75 285.8 222 71.2
Sopen03g031890 Solanum pennellii HOM05D000922 ORTHO05D008200 7.6e-75 284.3 186 76.9
THA.LOC104818216 Tarenaya hassleriana HOM05D000922 ORTHO05D008200 9.9e-75 283.9 202 70.3
Peaxi162Scf00089g01850 Petunia axillaris HOM05D000922 ORTHO05D008200 1.3e-74 283.5 206 71.8
AUR62010095 Chenopodium quinoa HOM05D000922 ORTHO05D008200 2.9e-74 282.3 200 71.5
AUR62013091 Chenopodium quinoa HOM05D000922 ORTHO05D008200 2.9e-74 282.3 195 72.3
Potri.015G078600 Populus trichocarpa HOM05D000922 ORTHO05D008200 3.8e-74 282.0 198 72.7
Lsat_1_v5_gn_5_15061 Lactuca sativa HOM05D000922 ORTHO05D008200 4.9e-74 281.6 205 70.7
A06p29780 Brassica napus HOM05D000922 ORTHO05D008200 8.4e-74 280.8 205 70.7
Cc04_g12150 Coffea canephora HOM05D000922 ORTHO05D008200 1.1e-73 280.4 206 70.4
Aqoxy3G02881 Aquilegia oxysepala HOM05D000922 ORTHO05D008200 3.2e-73 278.9 205 68.8
HPP92_011872 Vanilla planifolia HOM05D000922 ORTHO05D008200 5.5e-73 278.1 188 74.5
BraA06t25925Z Brassica rapa HOM05D000922 ORTHO05D008200 7.1e-73 277.7 205 70.2
Migut.O00114 Erythranthe guttata HOM05D000922 ORTHO05D008200 9.3e-73 277.3 196 71.9
AL8G40030 Arabidopsis lyrata HOM05D000922 ORTHO05D008200 1.2e-72 276.9 205 70.2
CARHR276810 Cardamine hirsuta HOM05D000922 ORTHO05D008200 2.1e-72 276.2 205 69.8
FAN08G1692 Fragaria x ananassa HOM05D000922 ORTHO05D008200 2.7e-72 275.8 226 66.4
PGR044G0925 Punica granatum HOM05D000922 ORTHO05D008200 3.5e-72 275.4 199 71.4
Aa31LG4G16810 Aethionema arabicum HOM05D002875 ORTHO05D003215 4.6e-72 275.0 188 72.3
AT5G63000 Arabidopsis thaliana HOM05D000922 ORTHO05D008200 4.6e-72 275.0 205 69.8
SGA_v2.0_scaffold90G27896 Striga asiatica HOM05D000922 ORTHO05D008200 4.6e-72 275.0 192 73.4
Carub.0008s2371 Capsella rubella HOM05D000922 ORTHO05D008200 6.0e-72 274.6 202 70.3
Thhalv10004944m.g Eutrema salsugineum HOM05D000922 ORTHO05D008200 1.3e-71 273.5 205 69.8
arahy.Tifrunner.gnm1.ann1.HJA5XH Arachis hypogaea HOM05D000922 ORTHO05D008200 1.8e-71 273.1 240 62.1
BcaC01g02547 Brassica carinata HOM05D000922 ORTHO05D008200 2.3e-71 272.7 205 69.3
C03p63610 Brassica napus HOM05D000922 ORTHO05D008200 2.3e-71 272.7 205 69.3
BolC3t18619H Brassica oleracea HOM05D000922 ORTHO05D008200 2.3e-71 272.7 205 69.3
Sp2g26130 Schrenkiella parvula HOM05D000922 ORTHO05D008200 3.0e-71 272.3 198 69.7
BcaB02g09714 Brassica carinata HOM05D000922 ORTHO05D008200 3.9e-71 271.9 205 68.8
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.1e-70 270.4 205 71.2
ECA246G4361 Erigeron canadensis HOM05D000922 ORTHO05D008200 1.1e-70 270.4 197 69.0
EL10Ac9g21439 Beta vulgaris HOM05D000922 ORTHO05D008200 2.5e-70 269.2 230 63.5
unitig_0.g1435 Utricularia gibba HOM05D000922 ORTHO05D008200 3.7e-69 265.4 204 66.7
MBI16_g39217_MAGBIO Magnolia biondii HOM05D000922 ORTHO05D008200 8.1e-69 264.2 228 63.6
PSO832G1073 Papaver somniferum HOM05D000922 ORTHO05D008200 1.2e-67 260.4 205 66.8
CDE07G1875 Ceratophyllum demersum HOM05D000922 ORTHO05D008200 1.0e-66 257.3 175 75.4
Zm00001eb332970 Zea mays HOM05D000922 ORTHO05D008200 1.7e-66 256.5 188 69.7
Os01g0271000 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D008200 3.8e-66 255.4 187 70.1
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 1.3e-63 246.9 313 47.9
Sc04g0001730 Simmondsia chinensis HOM05D000922 ORTHO05D008200 1.8e-63 246.5 161 76.4
HanXRQChr05g0155781 Helianthus annuus HOM05D000922 ORTHO05D008200 3.7e-61 238.8 165 72.1
TPR.G37467 Trifolium pratense HOM05D000922 ORTHO05D008200 1.3e-58 230.3 134 91.8
arahy.Tifrunner.gnm1.ann1.UWQ2W3 Arachis hypogaea HOM05D000922 ORTHO05D008200 9.3e-57 224.2 134 82.1
SHI38067 Sapria himalayana HOM05D000922 ORTHO05D008200 1.0e-55 220.7 195 61.0
Manes.05G195400 Manihot esculenta HOM05D000922 ORTHO05D008200 5.1e-55 218.4 132 81.1
ATR1091G108 Amborella trichopoda HOM05D000922 ORTHO05D008200 6.7e-55 218.0 155 71.6
arahy.Tifrunner.gnm1.ann1.PQAW0Q Arachis hypogaea HOM05D000922 ORTHO05D008200 3.9e-47 192.2 118 81.4
TAR371G0469 Trochodendron aralioides HOM05D000922 ORTHO05D008200 6.7e-47 191.4 134 72.4
Cfa019117 Carpinus fangiana HOM05D000922 ORTHO05D008200 2.6e-46 189.5 116 82.8
Glyma.05G038900 Glycine max HOM05D000922 ORTHO05D008200 6.3e-45 184.9 108 87.0
Oeu023435.1 Olea europaea HOM05D000922 ORTHO05D008200 4.1e-44 182.2 106 84.9
SEGI_40590 Sequoiadendron giganteum HOM05D000922 ORTHO05D008200 5.3e-44 181.8 152 63.2
arahy.Tifrunner.gnm1.ann1.Q2CJ89 Arachis hypogaea HOM05D000922 ORTHO05D008200 7.7e-43 177.9 147 64.6
EL10Ac5g12019 Beta vulgaris HOM05D000922 ORTHO05D008200 1.0e-42 177.6 121 72.7
TPR.G11031 Trifolium pratense HOM05D000922 ORTHO05D008200 5.5e-41 171.8 92 90.2
Mapoly0191s0008 Marchantia polymorpha HOM05D000922 ORTHO05D008200 6.1e-32 141.7 185 44.9
AagrBONN_evm.TU.Sc2ySwM_228.4800 Anthoceros agrestis HOM05D000922 ORTHO05D008200 1.8e-31 140.2 178 43.3
Peaxi162Scf00089g01839 Petunia axillaris HOM05D000922 ORTHO05D008200 4.4e-30 135.6 155 49.7
arahy.Tifrunner.gnm1.ann1.JAVP2G Arachis hypogaea HOM05D000922 ORTHO05D008200 2.8e-29 132.9 134 53.0
Pp3c17_17380 Physcomitrium patens HOM05D000922 ORTHO05D008200 1.0e-23 114.4 184 39.7
SMO111G0048 Selaginella moellendorffii HOM05D000922 ORTHO05D008200 1.5e-22 110.5 138 42.8
Cpa.g.sc76.32 Carica papaya HOM05D000922 ORTHO05D008200 6.3e-21 105.1 201 39.8
CBR_g38960 Chara braunii HOM05D000922 ORTHO05D008200 5.9e-19 98.6 223 31.4
MCO04G383 Micromonas commoda HOM05D000922 ORTHO05D008200 2.3e-10 70.1 168 32.7
Medtr4g105580 Medicago truncatula HOM05D000922 ORTHO05D008200 5.0e-10 68.9 71 52.1
arahy.Tifrunner.gnm1.ann1.RUR1T0 Arachis hypogaea HOM05D000034 ORTHO05D000037 4.0e-07 59.3 49 65.3
SGA_v2.0_scaffold116G32233 Striga asiatica HOM05D000922 ORTHO05D008200 9.8e-06 54.7 38 63.2


User provided reference genes

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