Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21910_v3 Cicer arietinum L. HOM05D006935 ORTHO05D008944 8.1e-143 510.4 255 100.0
Medtr4g106970 Medicago truncatula HOM05D006935 ORTHO05D008944 1.6e-127 459.5 260 90.4
Psat4g057680 Pisum sativum HOM05D006935 ORTHO05D008944 2.6e-125 452.2 260 88.1
TPR.G37522 Trifolium pratense HOM05D006935 ORTHO05D008944 4.1e-118 428.3 255 86.3
Lj4g0026943 Lotus japonicus HOM05D006935 ORTHO05D008944 1.0e-116 423.7 260 83.5
Phvul.003G199600 Phaseolus vulgaris HOM05D006935 ORTHO05D008944 9.1e-110 400.6 259 78.0
Lalb_Chr07g0182691 Lupinus albus HOM05D006935 ORTHO05D008944 1.5e-109 399.8 256 80.9
Glyma.05G036900 Glycine max HOM05D006935 ORTHO05D008944 1.4e-107 393.3 260 78.1
VMungo1215G2532 Vigna mungo HOM05D006935 ORTHO05D008944 2.0e-104 382.9 259 75.7
QL10p011920 Quercus lobata HOM05D006935 ORTHO05D008944 3.9e-97 358.6 243 74.1
CiPaw.11G027700 Carya illinoinensis HOM05D006935 ORTHO05D008944 8.8e-97 357.5 248 72.2
Potri.015G074700 Populus trichocarpa HOM05D006935 ORTHO05D008944 3.3e-96 355.5 232 75.4
Gorai.007G001900 Gossypium raimondii HOM05D006935 ORTHO05D008944 4.4e-96 355.1 248 70.2
Sabra15G0098700 Salix brachista HOM05D006935 ORTHO05D008944 4.4e-96 355.1 232 76.3
Gohir.D11G001000 Gossypium hirsutum HOM05D006935 ORTHO05D008944 3.7e-95 352.1 238 72.3
Thecc.03G010500 Theobroma cacao HOM05D006935 ORTHO05D008944 3.7e-95 352.1 250 70.8
Haze_07457 Corylus avellana HOM05D006935 ORTHO05D008944 4.8e-95 351.7 256 71.1
COL.COLO4_04599 Corchorus olitorius HOM05D006935 ORTHO05D008944 6.3e-95 351.3 240 73.3
Dinv09149 Davidia involucrata HOM05D006935 ORTHO05D008944 6.3e-95 351.3 256 69.5
ClCG01G013080 Citrullus lanatus HOM05D006935 ORTHO05D008944 1.1e-94 350.5 241 72.6
CANSAT80G0279 Cannabis sativa HOM05D006935 ORTHO05D008944 1.4e-94 350.1 203 83.7
Gohir.A11G001400 Gossypium hirsutum HOM05D006935 ORTHO05D008944 1.4e-94 350.1 238 71.8
Cfa019105 Carpinus fangiana HOM05D006935 ORTHO05D004872 1.8e-94 349.7 266 68.4
Eucgr.B00368 Eucalyptus grandis HOM05D006935 ORTHO05D008944 3.1e-94 349.0 254 70.1
MELO3C002259.2 Cucumis melo HOM05D006935 ORTHO05D008944 9.1e-94 347.4 242 71.5
CAN.G781.17 Capsicum annuum HOM05D006935 ORTHO05D008944 1.2e-93 347.1 262 67.2
CsaV3_1G008420 Cucumis sativus L. HOM05D006935 ORTHO05D008944 1.6e-93 346.7 242 71.5
Actinidia19311 Actinidia chinensis HOM05D006935 ORTHO05D008944 3.5e-93 345.5 242 71.1
Manes.06G104000 Manihot esculenta HOM05D006935 ORTHO05D008944 7.7e-93 344.4 224 74.1
Peaxi162Scf00017g02821 Petunia axillaris HOM05D006935 ORTHO05D008944 7.7e-93 344.4 261 68.2
GSVIVG01007766001 Vitis vinifera HOM05D006935 ORTHO05D008944 1.0e-92 344.0 247 70.4
Duzib068G1137 Durio zibethinus HOM05D006935 ORTHO05D008944 1.3e-92 343.6 226 73.9
Rhsim08G0171100 Rhododendron simsii HOM05D006935 ORTHO05D008944 1.3e-92 343.6 226 73.9
MD14G1182500 Malus domestica HOM05D006935 ORTHO05D008944 1.7e-92 343.2 231 74.0
vmacro19376 Vaccinium macrocarpon HOM05D006935 ORTHO05D008944 2.2e-92 342.8 240 69.6
Cpa.g.sc124.48 Carica papaya HOM05D006935 ORTHO05D008944 2.9e-92 342.4 238 70.2
CSS0041391 Camellia sinensis var. sinensis HOM05D006935 ORTHO05D008944 3.8e-92 342.0 243 70.4
Atru.chr9.2451 Acer truncatum HOM05D006935 ORTHO05D008944 1.9e-91 339.7 226 74.8
Nitab4.5_0000852g0050 Nicotiana tabacum HOM05D006935 ORTHO05D008944 2.5e-91 339.3 253 68.0
FAN04G2667 Fragaria x ananassa HOM05D006935 ORTHO05D008944 4.2e-91 338.6 235 72.8
RcHm_v2.0_Chr7g0193711 Rosa chinensis HOM05D006935 ORTHO05D008944 7.2e-91 337.8 249 68.7
Ciclev10021410m.g Citrus clementina HOM05D006935 ORTHO05D008944 9.4e-91 337.4 233 72.1
Nitab4.5_0005862g0020 Nicotiana tabacum HOM05D006935 ORTHO05D008944 1.2e-90 337.0 253 67.2
PGR083G2867 Punica granatum HOM05D006935 ORTHO05D008944 1.6e-90 336.7 255 69.4
PGSC0003DMG400024494 Solanum tuberosum HOM05D006935 ORTHO05D008944 1.6e-90 336.7 257 67.3
FvH4_5g05200 Fragaria vesca HOM05D006935 ORTHO05D008944 2.1e-90 336.3 250 68.4
SalBow5G1860 Salvia bowleyana HOM05D006935 ORTHO05D008944 2.7e-90 335.9 258 66.3
Nn4g22789 Nelumbo nucifera HOM05D006935 ORTHO05D008944 4.7e-90 335.1 251 68.1
TWI81G0925 Tripterygium wilfordii HOM05D006935 ORTHO05D008944 1.0e-89 334.0 238 71.4
TWI81G0947 Tripterygium wilfordii HOM05D006935 ORTHO05D008944 1.0e-89 334.0 238 71.4
FAN18G4193 Fragaria x ananassa HOM05D006935 ORTHO05D004872 1.4e-89 333.6 233 71.2
Sopen03g033350 Solanum pennellii HOM05D006935 ORTHO05D008944 1.4e-89 333.6 243 69.5
MSTRG.11442 Avicennia marina HOM05D006935 ORTHO05D008944 3.0e-89 332.4 262 65.6
Migut.I00022 Erythranthe guttata HOM05D006935 ORTHO05D008944 3.0e-89 332.4 241 68.5
HanXRQChr16g0517271 Helianthus annuus HOM05D006935 ORTHO05D008944 3.0e-89 332.4 259 67.6
SGA_v2.0_scaffold90G27953 Striga asiatica HOM05D006935 ORTHO05D008944 3.0e-89 332.4 235 69.8
Solyc03g114250.4 Solanum lycopersicum HOM05D006935 ORTHO05D008944 8.8e-89 330.9 245 68.2
Aqoxy3G02966 Aquilegia oxysepala HOM05D006935 ORTHO05D008944 1.2e-88 330.5 229 72.1
THA.LOC104798977 Tarenaya hassleriana HOM05D006935 ORTHO05D008944 1.2e-88 330.5 198 78.8
unitig_749.g13472 Utricularia gibba HOM05D006935 ORTHO05D008944 1.5e-88 330.1 231 71.0
Lsat_1_v5_gn_5_17180 Lactuca sativa HOM05D006935 ORTHO05D008944 2.0e-88 329.7 253 67.6
Sc12g0005390 Simmondsia chinensis HOM05D006935 ORTHO05D008944 2.0e-88 329.7 253 66.4
Cc04_g13740 Coffea canephora HOM05D006935 ORTHO05D008944 2.6e-88 329.3 253 68.0
Hund09430 Selenicereus undatus HOM05D006935 ORTHO05D004872 4.4e-88 328.6 226 70.4
AL8G39840 Arabidopsis lyrata HOM05D006935 ORTHO05D008944 5.7e-88 328.2 226 71.2
AT5G62840 Arabidopsis thaliana HOM05D006935 ORTHO05D008944 9.7e-88 327.4 251 66.1
Ah.02g110460 Amaranthus hybridus HOM05D006935 ORTHO05D008944 2.8e-87 325.9 251 65.3
ECA236G1157 Erigeron canadensis HOM05D006935 ORTHO05D008944 3.7e-87 325.5 237 70.5
BcaB02g09696 Brassica carinata HOM05D006935 ORTHO05D008944 4.8e-87 325.1 247 66.4
Carub.0008s2355 Capsella rubella HOM05D006935 ORTHO05D008944 6.3e-87 324.7 228 69.3
BcaC01g02525 Brassica carinata HOM05D006935 ORTHO05D008944 8.3e-87 324.3 248 68.1
C03p63900 Brassica napus HOM05D006935 ORTHO05D008944 8.3e-87 324.3 248 68.1
BolC3t18645H Brassica oleracea HOM05D006935 ORTHO05D008944 8.3e-87 324.3 248 68.1
Thhalv10004703m.g Eutrema salsugineum HOM05D006935 ORTHO05D008944 1.1e-86 323.9 226 70.8
Sp2g25990 Schrenkiella parvula HOM05D006935 ORTHO05D008944 1.1e-86 323.9 226 69.9
Aa31LG11G860 Aethionema arabicum HOM05D006935 ORTHO05D008944 1.8e-86 323.2 259 64.1
A06p29590 Brassica napus HOM05D006935 ORTHO05D008944 2.4e-86 322.8 247 65.6
BraA06t25905Z Brassica rapa HOM05D006935 ORTHO05D008944 4.1e-86 322.0 258 63.6
CARHR276620 Cardamine hirsuta HOM05D006935 ORTHO05D008944 7.0e-86 321.2 227 69.2
TAR622G0425 Trochodendron aralioides HOM05D006935 ORTHO05D008944 2.7e-85 319.3 190 80.5
MBI16_g05651_MAGBIO Magnolia biondii HOM05D006935 ORTHO05D008944 3.8e-84 315.5 190 76.8
PSO302G0172 Papaver somniferum HOM05D006935 ORTHO05D008944 6.5e-84 314.7 226 71.2
AUR62008221 Chenopodium quinoa HOM05D006935 ORTHO05D008944 2.5e-83 312.8 202 74.8
Os01g0660900 Oryza sativa ssp. japonica HOM05D006935 ORTHO05D008944 1.6e-82 310.1 198 75.3
Pp3c16_7000 Physcomitrium patens HOM05D006935 ORTHO05D008944 2.1e-82 309.7 206 73.8
CDE04G2457 Ceratophyllum demersum HOM05D005049 ORTHO05D004872 3.0e-81 305.8 226 66.8
MBI16_g32800_MAGBIO Magnolia biondii HOM05D006935 ORTHO05D008944 3.0e-81 305.8 236 65.3
EL10Ac5g10748 Beta vulgaris HOM05D006935 ORTHO05D008944 5.2e-81 305.1 185 76.2
Zm00001eb359580 Zea mays HOM05D006935 ORTHO05D008944 5.2e-81 305.1 242 65.3
SEGI_12501 Sequoiadendron giganteum HOM05D006935 ORTHO05D008944 3.1e-78 295.8 199 69.8
HPP92_024712 Vanilla planifolia HOM05D006935 ORTHO05D008944 5.4e-78 295.0 241 62.7
FAN08G3443 Fragaria x ananassa HOM05D006935 ORTHO05D004872 5.9e-77 291.6 211 71.1
AUR62030975 Chenopodium quinoa HOM05D006935 ORTHO05D008944 1.0e-76 290.8 203 70.0
Mapoly0091s0071 Marchantia polymorpha HOM05D006935 ORTHO05D008944 3.3e-75 285.8 198 69.7
SMO141G0200 Selaginella moellendorffii HOM05D006935 ORTHO05D008944 6.1e-74 281.6 183 72.7
AagrBONN_evm.TU.Sc2ySwM_117.38 Anthoceros agrestis HOM05D006935 ORTHO05D008944 3.0e-73 279.3 199 67.8
Oeu016368.1 Olea europaea HOM05D006935 ORTHO05D008944 2.0e-72 276.6 258 57.8
Peaxi162Scf00017g02830 Petunia axillaris HOM05D006935 ORTHO05D008944 6.1e-66 255.0 160 76.2
Hma1.2p1_0176F.1_g077560 Hydrangea macrophylla HOM05D006935 ORTHO05D008944 1.4e-57 227.3 180 64.4
ATR0730G238 Amborella trichopoda HOM05D006935 ORTHO05D008944 1.8e-57 226.9 214 55.6
Sed0005822 Sechium edule HOM05D006935 ORTHO05D008944 7.1e-54 214.9 174 64.9
Cre06.g272300 Chlamydomonas reinhardtii HOM05D006935 ORTHO05D008944 2.5e-51 206.5 205 52.7
EL10Ac5g10761 Beta vulgaris HOM05D006935 ORTHO05D008944 6.8e-49 198.4 181 58.6
Actinidia20183 Actinidia chinensis HOM05D006935 ORTHO05D008944 7.1e-46 188.3 117 78.6
Psat4g057640 Pisum sativum HOM05D006935 ORTHO05D008944 3.9e-44 182.6 92 94.6
Prupe.5G175000 Prunus persica HOM05D006935 ORTHO05D008944 2.6e-40 169.9 103 80.6
Lj5C123T7 Lonicera japonica HOM05D006935 ORTHO05D008944 9.3e-38 161.4 116 65.5
arahy.Tifrunner.gnm1.ann1.0F4FSZ Arachis hypogaea HOM05D006935 ORTHO05D008944 1.9e-27 127.1 73 86.3
arahy.Tifrunner.gnm1.ann1.209TGD Arachis hypogaea HOM05D006935 ORTHO05D008944 1.9e-27 127.1 75 84.0
MD06G1175700 Malus domestica HOM05D006935 ORTHO05D008944 2.5e-27 126.7 81 70.4
Actinidia01759 Actinidia chinensis HOM05D006935 ORTHO05D008944 1.4e-17 94.4 63 71.4
MCO16G270 Micromonas commoda HOM05D006935 ORTHO05D008944 1.8e-17 94.0 211 32.7
PRCOL_00001554 Prasinoderma coloniale HOM05D006935 ORTHO05D008944 6.9e-17 92.0 196 32.7
Hund09427 Selenicereus undatus HOM05D006935 ORTHO05D008944 2.4e-09 67.0 59 57.6
Lj5C123T8 Lonicera japonica HOM05D006935 ORTHO05D008944 5.3e-09 65.9 37 86.5
Os04g0224600 Oryza sativa ssp. japonica HOM05D006820 ORTHO05D008526 1.4e-06 57.8 188 27.7
Nn4g24775 Nelumbo nucifera HOM05D006935 ORTHO05D008944 1.9e-06 57.4 33 69.7
Cre13.g564000 Chlamydomonas reinhardtii HOM05D006820 ORTHO05D008526 5.5e-06 55.8 193 28.5
PGSC0003DMG400014660 Solanum tuberosum HOM05D006820 ORTHO05D008526 5.5e-06 55.8 187 33.2


User provided reference genes

Program Settings