Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21905_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 2.3e-88 328.9 175 100.0
Ca_21923_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 6.3e-78 294.3 156 99.4
Psat4g057000 Pisum sativum HOM05D007441 ORTHO05D009501 2.3e-72 275.8 173 83.2
Medtr4g106640 Medicago truncatula HOM05D007441 ORTHO05D009501 2.8e-70 268.9 175 82.3
Glyma.17G091300 Glycine max HOM05D007441 ORTHO05D009501 4.1e-61 238.4 188 68.1
Lj4g0018861 Lotus japonicus HOM05D007441 ORTHO05D009501 3.5e-60 235.3 174 71.8
TPR.G37479 Trifolium pratense HOM05D007441 ORTHO05D009501 3.2e-58 228.8 174 71.3
Phvul.003G198700 Phaseolus vulgaris HOM05D007441 ORTHO05D009501 4.2e-58 228.4 181 68.5
arahy.Tifrunner.gnm1.ann1.DR4P4T Arachis hypogaea HOM05D007441 ORTHO05D009501 8.0e-57 224.2 181 65.2
VMungo1215G1307 Vigna mungo HOM05D007441 ORTHO05D009501 8.0e-57 224.2 181 65.7
arahy.Tifrunner.gnm1.ann1.01HJP6 Arachis hypogaea HOM05D007441 ORTHO05D009501 2.3e-56 222.6 181 64.6
GSVIVG01007790001 Vitis vinifera HOM05D007441 ORTHO05D009501 9.1e-53 210.7 150 72.0
RcHm_v2.0_Chr7g0193911 Rosa chinensis HOM05D007441 ORTHO05D009501 2.0e-52 209.5 185 60.5
Prupe.5G176500 Prunus persica HOM05D007441 ORTHO05D009501 2.2e-51 206.1 185 60.0
MD14G1183800 Malus domestica HOM05D007441 ORTHO05D009501 1.1e-50 203.8 185 60.0
Lalb_Chr07g0182651 Lupinus albus HOM05D007441 ORTHO05D009501 1.6e-49 199.9 162 66.0
QL10p013655 Quercus lobata HOM05D007441 ORTHO05D009501 2.1e-49 199.5 149 67.1
Actinidia19093 Actinidia chinensis HOM05D007441 ORTHO05D009501 4.7e-49 198.4 144 69.4
FvH4_5g05090 Fragaria vesca HOM05D007441 ORTHO05D009501 4.7e-49 198.4 179 58.7
FAN18G4363 Fragaria x ananassa HOM05D007441 ORTHO05D009501 4.7e-49 198.4 144 68.8
Hma1.2p1_0176F.1_g077710 Hydrangea macrophylla HOM05D007441 ORTHO05D009501 6.1e-49 198.0 189 59.8
Duzib205G0170 Durio zibethinus HOM05D007441 ORTHO05D009501 8.0e-49 197.6 179 57.5
Sc04g0001930 Simmondsia chinensis HOM05D007441 ORTHO05D009501 1.4e-48 196.8 145 70.3
CSS0037538 Camellia sinensis var. sinensis HOM05D007441 ORTHO05D009501 2.3e-48 196.1 150 67.3
Ciclev10022460m.g Citrus clementina HOM05D007441 ORTHO05D009501 3.0e-48 195.7 180 58.3
FAN04G2715 Fragaria x ananassa HOM05D007441 ORTHO05D009501 6.8e-48 194.5 179 57.5
FAN13G3077 Fragaria x ananassa HOM05D007441 ORTHO05D009501 2.0e-47 193.0 144 66.7
THA.LOC104809273 Tarenaya hassleriana HOM05D007441 ORTHO05D009501 1.3e-46 190.3 144 68.1
CiPaw.11G029400 Carya illinoinensis HOM05D007441 ORTHO05D009501 3.7e-46 188.7 177 58.8
Duzib084G0400 Durio zibethinus HOM05D007441 ORTHO05D009501 8.3e-46 187.6 169 59.2
CANSAT80G2614 Cannabis sativa HOM05D007441 ORTHO05D009501 1.8e-45 186.4 155 65.2
AUR62008240 Chenopodium quinoa HOM05D007441 ORTHO05D009501 1.8e-45 186.4 141 66.7
AUR62030992 Chenopodium quinoa HOM05D007441 ORTHO05D009501 1.8e-45 186.4 141 67.4
Dinv20676 Davidia involucrata HOM05D007441 ORTHO05D009501 2.4e-45 186.0 176 57.4
Lj9A451T94 Lonicera japonica HOM05D007441 ORTHO05D009501 7.0e-45 184.5 145 64.1
Potri.012G078400 Populus trichocarpa HOM05D007441 ORTHO05D009501 9.1e-45 184.1 175 57.1
Thecc.03G008500 Theobroma cacao HOM05D007441 ORTHO05D009501 9.1e-45 184.1 167 59.3
Sabra12G0056200 Salix brachista HOM05D007441 ORTHO05D009501 2.7e-44 182.6 181 56.4
Lsat_1_v5_gn_1_26521 Lactuca sativa HOM05D007441 ORTHO05D009501 3.5e-44 182.2 169 58.6
TWI15G0162 Tripterygium wilfordii HOM05D007441 ORTHO05D009501 3.5e-44 182.2 173 57.8
Atru.chr9.2436 Acer truncatum HOM05D007441 ORTHO05D009501 4.5e-44 181.8 184 53.8
Potri.015G073900 Populus trichocarpa HOM05D007441 ORTHO05D009501 1.0e-43 180.6 175 58.3
Manes.06G102900 Manihot esculenta HOM05D007441 ORTHO05D009501 1.7e-43 179.9 177 55.9
ECA247G2439 Erigeron canadensis HOM05D007441 ORTHO05D009501 2.3e-43 179.5 138 65.9
PGSC0003DMG400024487 Solanum tuberosum HOM05D007441 ORTHO05D009501 2.3e-43 179.5 159 59.7
TAR622G1175 Trochodendron aralioides HOM05D007441 ORTHO05D009501 2.3e-43 179.5 144 63.2
Solyc03g114120.3 Solanum lycopersicum HOM05D007441 ORTHO05D009501 2.9e-43 179.1 159 59.7
Sopen03g033180 Solanum pennellii HOM05D007441 ORTHO05D009501 2.9e-43 179.1 159 59.7
Hund02733 Selenicereus undatus HOM05D007441 ORTHO05D009501 3.8e-43 178.7 147 61.9
SGA_v2.0_scaffold90G27976 Striga asiatica HOM05D007441 ORTHO05D009501 5.0e-43 178.3 150 63.3
Rhsim12G0163200 Rhododendron simsii HOM05D007441 ORTHO05D009501 1.5e-42 176.8 144 61.8
Cpa.g.sc124.33 Carica papaya HOM05D007441 ORTHO05D009501 3.3e-42 175.6 175 56.6
C05p25830 Brassica napus HOM05D007441 ORTHO05D009501 5.6e-42 174.9 140 62.1
HanXRQChr02g0037211 Helianthus annuus HOM05D007441 ORTHO05D009501 9.5e-42 174.1 166 58.4
BcaC05g26717 Brassica carinata HOM05D007441 ORTHO05D009501 1.2e-41 173.7 149 59.1
AL1G40490 Arabidopsis lyrata HOM05D007441 ORTHO05D009501 1.6e-41 173.3 140 62.1
Haze_07488 Corylus avellana HOM05D007441 ORTHO05D009501 1.6e-41 173.3 184 55.4
Oeu016356.1 Olea europaea HOM05D007441 ORTHO05D009501 1.0e-40 170.6 156 57.1
A09p38770 Brassica napus HOM05D007441 ORTHO05D009501 1.4e-40 170.2 140 61.4
BraA09t39385Z Brassica rapa HOM05D007441 ORTHO05D009501 1.4e-40 170.2 140 61.4
Carub.0001s2566 Capsella rubella HOM05D007441 ORTHO05D009501 1.4e-40 170.2 150 59.3
Nitab4.5_0006831g0010 Nicotiana tabacum HOM05D007441 ORTHO05D009501 3.0e-40 169.1 150 58.7
AT1G24450 Arabidopsis thaliana HOM05D007441 ORTHO05D009501 6.8e-40 167.9 149 58.4
Sp1g23350 Schrenkiella parvula HOM05D007441 ORTHO05D009501 8.9e-40 167.5 140 61.4
PGR044G0794 Punica granatum HOM05D007441 ORTHO05D009501 1.2e-39 167.2 141 59.6
EL10Ac5g10787 Beta vulgaris HOM05D007441 ORTHO05D009501 1.5e-39 166.8 126 65.9
BolC5t31303H Brassica oleracea HOM05D007441 ORTHO05D009501 1.5e-39 166.8 176 51.7
CARHR026680 Cardamine hirsuta HOM05D007441 ORTHO05D009501 1.5e-39 166.8 149 56.4
Thhalv10008862m.g Eutrema salsugineum HOM05D007441 ORTHO05D009501 5.7e-39 164.9 140 60.0
CAN.G4872.1 Capsicum annuum HOM05D007441 ORTHO05D009501 1.7e-38 163.3 174 52.9
Nn4g22840 Nelumbo nucifera HOM05D007441 ORTHO05D009501 2.2e-38 162.9 140 60.0
Aa31LG7G9580 Aethionema arabicum HOM05D007441 ORTHO05D009501 2.9e-38 162.5 148 58.1
SalBow5G3166 Salvia bowleyana HOM05D007441 ORTHO05D009501 3.7e-38 162.2 146 57.5
Aqoxy3G03040 Aquilegia oxysepala HOM05D007441 ORTHO05D009501 1.1e-37 160.6 141 56.7
Nitab4.5_0010542g0040 Nicotiana tabacum HOM05D007441 ORTHO05D001268 1.4e-37 160.2 134 61.9
PSO832G4588 Papaver somniferum HOM05D007441 ORTHO05D009501 1.6e-36 156.8 139 54.7
MSTRG.23109 Avicennia marina HOM05D007441 ORTHO05D009501 1.0e-35 154.1 181 49.7
CAN.G781.35 Capsicum annuum HOM05D007441 ORTHO05D009501 1.0e-35 154.1 135 58.5
DCAR_031307 Daucus carota HOM05D007441 ORTHO05D009501 5.0e-35 151.8 123 61.8
AUR62029952 Chenopodium quinoa HOM05D007441 ORTHO05D009501 1.1e-34 150.6 126 61.1
BcaC05g26720 Brassica carinata HOM05D007441 ORTHO05D009501 3.6e-33 145.6 176 47.7
Medtr4g079220 Medicago truncatula HOM05D007441 ORTHO05D009501 3.6e-33 145.6 94 83.0
BcaC05g26525 Brassica carinata HOM05D007441 ORTHO05D009501 8.9e-32 141.0 113 61.1
Peaxi162Scf00017g00269 Petunia axillaris HOM05D007441 ORTHO05D009501 8.9e-32 141.0 124 57.3
BcaC06g35265 Brassica carinata HOM05D007441 ORTHO05D009501 4.6e-28 128.6 109 58.7
C07p18070 Brassica napus HOM05D007441 ORTHO05D009501 2.3e-27 126.3 109 57.8
ATR1149G031 Amborella trichopoda HOM05D007441 ORTHO05D009501 2.5e-26 122.9 140 47.9
MBI15_g31106_MAGBIO Magnolia biondii HOM05D007441 ORTHO05D009501 8.1e-25 117.9 121 50.4
Actinidia34944 Actinidia chinensis HOM05D007441 ORTHO05D009501 2.3e-24 116.3 84 65.5
Dinv09163 Davidia involucrata HOM05D007441 ORTHO05D009501 1.5e-23 113.6 88 63.6
AUR62039786 Chenopodium quinoa HOM05D007441 ORTHO05D009501 7.5e-23 111.3 119 51.3
Zm00001eb210540 Zea mays HOM05D007441 ORTHO05D009501 1.3e-22 110.5 150 37.3
BolC7t42316H Brassica oleracea HOM05D007441 ORTHO05D009501 2.4e-21 106.3 105 50.5
CAN.G781.34 Capsicum annuum HOM05D007441 ORTHO05D009501 2.3e-19 99.8 84 59.5
AUR62040474 Chenopodium quinoa HOM05D007441 ORTHO05D009501 7.3e-18 94.7 126 46.0
COL.COLO4_16923 Corchorus olitorius HOM05D007441 ORTHO05D009501 1.3e-14 84.0 89 49.4
SEGI_24388 Sequoiadendron giganteum HOM05D007441 ORTHO05D009501 2.7e-12 76.3 109 37.6
Os03g0854400 Oryza sativa ssp. japonica HOM05D007441 ORTHO05D009501 1.0e-11 74.3 141 31.9
SMO118G0028 Selaginella moellendorffii HOM05D007441 ORTHO05D009501 3.0e-11 72.8 120 37.5
Migut.I00040 Erythranthe guttata HOM05D007441 ORTHO05D009501 3.9e-11 72.4 68 47.1
HPP92_004711 Vanilla planifolia HOM05D007441 ORTHO05D009501 2.5e-10 69.7 92 45.7


User provided reference genes

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