Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21889_v3 Cicer arietinum L. HOM05D006519 ORTHO05D008306 1.2e-152 543.1 271 100.0
TPR.G37507 Trifolium pratense HOM05D006519 ORTHO05D008306 1.3e-138 496.5 271 89.3
Psat0s1227g0160 Pisum sativum HOM05D006519 ORTHO05D008306 5.1e-135 484.6 271 87.5
Medtr4g106410 Medicago truncatula HOM05D006519 ORTHO05D008306 8.1e-133 477.2 271 86.7
Glyma.05G033800 Glycine max HOM05D006519 ORTHO05D008306 1.6e-125 453.0 269 83.3
Lj4g0003537 Lotus japonicus HOM05D006519 ORTHO05D008306 2.5e-118 429.1 270 80.0
Lalb_Chr07g0182571 Lupinus albus HOM05D006519 ORTHO05D008306 9.0e-116 420.6 272 76.5
arahy.Tifrunner.gnm1.ann1.L198ZR Arachis hypogaea HOM05D006519 ORTHO05D008306 6.7e-111 404.4 277 74.7
arahy.Tifrunner.gnm1.ann1.IBQC5J Arachis hypogaea HOM05D006519 ORTHO05D008306 6.2e-109 397.9 272 74.6
Haze_07439 Corylus avellana HOM05D006519 ORTHO05D008306 1.2e-104 383.6 282 66.7
CiPaw.11G031700 Carya illinoinensis HOM05D006519 ORTHO05D008306 7.9e-104 380.9 277 67.9
MD06G1181000 Malus domestica HOM05D006519 ORTHO05D008306 2.8e-101 372.5 272 66.9
CANSAT80G0931 Cannabis sativa HOM05D006519 ORTHO05D008306 2.4e-100 369.4 268 70.1
Potri.012G076100 Populus trichocarpa HOM05D006519 ORTHO05D008306 3.1e-100 369.0 258 70.2
Sabra12G0054300 Salix brachista HOM05D006519 ORTHO05D008306 5.9e-99 364.8 250 71.2
Ciclev10021480m.g Citrus clementina HOM05D006519 ORTHO05D008306 1.3e-98 363.6 279 64.9
Prupe.5G179000 Prunus persica HOM05D006519 ORTHO05D008306 8.5e-98 360.9 273 67.0
HanXRQChr09g0271821 Helianthus annuus HOM05D006519 ORTHO05D008306 3.6e-96 355.5 281 63.0
TWI81G0852 Tripterygium wilfordii HOM05D006519 ORTHO05D008306 6.1e-96 354.8 276 64.9
FvH4_5g16400 Fragaria vesca HOM05D006519 ORTHO05D008306 7.9e-96 354.4 261 65.9
FAN18G3891 Fragaria x ananassa HOM05D006519 ORTHO05D008306 7.9e-96 354.4 261 65.9
RcHm_v2.0_Chr7g0179701 Rosa chinensis HOM05D006519 ORTHO05D008306 7.9e-96 354.4 276 63.8
ECA232G3316 Erigeron canadensis HOM05D006519 ORTHO05D008306 1.8e-95 353.2 276 64.9
Nn3g17016 Nelumbo nucifera HOM05D006519 ORTHO05D008306 1.8e-95 353.2 279 64.9
Gorai.012G002000 Gossypium raimondii HOM05D006519 ORTHO05D008306 3.9e-95 352.1 282 62.8
CsaV3_1G008220 Cucumis sativus L. HOM05D006519 ORTHO05D008306 1.1e-94 350.5 266 66.2
FAN08G1114 Fragaria x ananassa HOM05D006519 ORTHO05D008306 1.9e-94 349.7 263 64.3
Sed0010209 Sechium edule HOM05D006519 ORTHO05D008306 1.9e-94 349.7 276 64.1
FAN13G2537 Fragaria x ananassa HOM05D006519 ORTHO05D008306 2.5e-94 349.4 262 66.4
Actinidia34959 Actinidia chinensis HOM05D006519 ORTHO05D008306 7.4e-94 347.8 268 64.6
Gohir.D04G001000 Gossypium hirsutum HOM05D006519 ORTHO05D008306 1.7e-93 346.7 282 62.8
Phvul.003G197000 Phaseolus vulgaris HOM05D006519 ORTHO05D008306 2.8e-93 345.9 197 84.8
Sc12g0005660 Simmondsia chinensis HOM05D006519 ORTHO05D008306 3.7e-93 345.5 276 64.1
Lsat_1_v5_gn_4_73480 Lactuca sativa HOM05D006519 ORTHO05D008306 4.8e-93 345.1 278 61.9
TAR629G1196 Trochodendron aralioides HOM05D006519 ORTHO05D008306 4.8e-93 345.1 240 69.6
Oeu016332.2 Olea europaea HOM05D006519 ORTHO05D008306 1.1e-92 344.0 272 65.1
THA.LOC104809258 Tarenaya hassleriana HOM05D006519 ORTHO05D008306 1.4e-92 343.6 269 62.1
MELO3C002238.2 Cucumis melo HOM05D006519 ORTHO05D008306 1.8e-92 343.2 276 62.7
Duzib068G0259 Durio zibethinus HOM05D006519 ORTHO05D008306 1.8e-92 343.2 272 63.6
CSS0037543 Camellia sinensis var. sinensis HOM05D006519 ORTHO05D008306 4.1e-92 342.0 268 64.2
GSVIVG01007824001 Vitis vinifera HOM05D006519 ORTHO05D008306 4.1e-92 342.0 258 65.1
ClCG01G014120 Citrullus lanatus HOM05D006519 ORTHO05D008306 6.9e-92 341.3 255 67.8
CSS0018091 Camellia sinensis var. sinensis HOM05D006519 ORTHO05D008306 2.0e-91 339.7 268 63.4
MBI14_g12785_MAGBIO Magnolia biondii HOM05D006519 ORTHO05D008306 2.6e-91 339.3 251 66.1
Thecc.03G004500 Theobroma cacao HOM05D006519 ORTHO05D008306 2.6e-91 339.3 275 61.8
MSTRG.11426 Avicennia marina HOM05D006519 ORTHO05D008306 5.9e-91 338.2 238 70.2
Gohir.A05G415200 Gossypium hirsutum HOM05D006519 ORTHO05D008306 1.3e-90 337.0 274 61.7
Solyc03g113860.2 Solanum lycopersicum HOM05D006519 ORTHO05D008306 1.7e-90 336.7 268 62.7
Migut.I00056 Erythranthe guttata HOM05D006519 ORTHO05D008306 2.2e-90 336.3 235 70.2
Nitab4.5_0003386g0010 Nicotiana tabacum HOM05D006519 ORTHO05D008306 8.5e-90 334.3 278 61.5
DCAR_031285 Daucus carota HOM05D006519 ORTHO05D008306 1.1e-89 334.0 279 61.6
Sopen03g032910 Solanum pennellii HOM05D006519 ORTHO05D008306 1.4e-89 333.6 268 62.3
AT5G50110 Arabidopsis thaliana HOM05D006519 ORTHO05D008306 7.2e-89 331.3 266 61.7
PGSC0003DMG400024585 Solanum tuberosum HOM05D006519 ORTHO05D008306 9.4e-89 330.9 268 62.3
Atru.chr9.2404 Acer truncatum HOM05D006519 ORTHO05D008306 1.4e-87 327.0 281 61.9
CAN.G853.13 Capsicum annuum HOM05D006519 ORTHO05D008306 1.4e-87 327.0 270 61.1
Carub.0008s1012 Capsella rubella HOM05D006519 ORTHO05D008306 2.3e-87 326.2 266 59.4
Sp6g11980 Schrenkiella parvula HOM05D006519 ORTHO05D008306 2.3e-87 326.2 266 59.8
Cc04_g13570 Coffea canephora HOM05D006519 ORTHO05D008306 3.9e-87 325.5 279 59.9
Eucgr.B00339 Eucalyptus grandis HOM05D006519 ORTHO05D008306 6.7e-87 324.7 209 72.2
Hund02710 Selenicereus undatus HOM05D006519 ORTHO05D008306 1.5e-86 323.6 268 61.6
CARHR258520 Cardamine hirsuta HOM05D006519 ORTHO05D008306 7.4e-86 321.2 249 61.4
Ah.11g046180 Amaranthus hybridus HOM05D006519 ORTHO05D008306 1.3e-85 320.5 268 59.3
SalBow5G0752 Salvia bowleyana HOM05D006519 ORTHO05D008306 1.7e-85 320.1 313 54.3
SalBow5G4476 Salvia bowleyana HOM05D006519 ORTHO05D008306 2.2e-85 319.7 313 54.0
PSO591G0501 Papaver somniferum HOM05D006519 ORTHO05D008306 2.8e-85 319.3 288 56.9
BcaB01g02918 Brassica carinata HOM05D006519 ORTHO05D008306 4.8e-85 318.5 236 63.1
PGR083G2560 Punica granatum HOM05D006519 ORTHO05D008306 1.4e-84 317.0 222 68.9
Aa31sc174G50 Aethionema arabicum HOM05D006519 ORTHO05D008306 1.8e-84 316.6 250 60.0
BolC3t15659H Brassica oleracea HOM05D006519 ORTHO05D008306 1.8e-84 316.6 268 59.3
BcaC01g04830 Brassica carinata HOM05D006519 ORTHO05D008306 2.4e-84 316.2 268 59.3
AUR62008282 Chenopodium quinoa HOM05D006519 ORTHO05D008306 3.1e-84 315.8 266 60.2
A03p27660 Brassica napus HOM05D006519 ORTHO05D008306 7.0e-84 314.7 236 63.6
BraA03t11979Z Brassica rapa HOM05D006519 ORTHO05D008306 7.0e-84 314.7 236 63.6
C03p33370 Brassica napus HOM05D006519 ORTHO05D008306 1.2e-83 313.9 268 59.0
ATR0314G030 Amborella trichopoda HOM05D006519 ORTHO05D008306 8.5e-82 307.8 281 58.0
Peaxi162Scf00017g02523 Petunia axillaris HOM05D006519 ORTHO05D008306 3.2e-81 305.8 210 71.0
EL10Ac5g10829 Beta vulgaris HOM05D006519 ORTHO05D008306 8.0e-80 301.2 324 50.6
Zm00001eb279990 Zea mays HOM05D006519 ORTHO05D008306 3.3e-78 295.8 230 62.6
AL8G24100 Arabidopsis lyrata HOM05D006519 ORTHO05D008306 7.4e-78 294.7 209 65.1
COL.COLO4_04635 Corchorus olitorius HOM05D006519 ORTHO05D008306 8.2e-77 291.2 238 64.7
Thhalv10014373m.g Eutrema salsugineum HOM05D006519 ORTHO05D008306 7.7e-75 284.6 268 55.2
SGA_v2.0_scaffold467G52031 Striga asiatica HOM05D006519 ORTHO05D008306 1.2e-72 277.3 196 67.9
Mapoly0003s0145 Marchantia polymorpha HOM05D006519 ORTHO05D008306 6.7e-71 271.6 229 58.5
Pp3c21_11830 Physcomitrium patens HOM05D006519 ORTHO05D008306 6.3e-69 265.0 229 55.5
AUR62031043 Chenopodium quinoa HOM05D006519 ORTHO05D008306 1.6e-67 260.4 215 61.4
Rhsim12G0161700 Rhododendron simsii HOM05D006519 ORTHO05D008306 1.6e-67 260.4 266 53.8
unitig_62.g23572 Utricularia gibba HOM05D006519 ORTHO05D008306 1.3e-66 257.3 188 64.9
Lj9C454G3 Lonicera japonica HOM05D006519 ORTHO05D008306 6.5e-66 255.0 282 51.4
VMungo1215G1861 Vigna mungo HOM05D006519 ORTHO05D008306 1.6e-64 250.4 213 62.4
SMO236G0037 Selaginella moellendorffii HOM05D006519 ORTHO05D008306 1.8e-63 246.9 217 54.8
Hma1.2p1_0002F.1_g002810 Hydrangea macrophylla HOM05D006519 ORTHO05D008306 4.5e-59 232.3 161 69.6
vmacro16588 Vaccinium macrocarpon HOM05D006519 ORTHO05D008306 7.2e-57 224.9 179 61.5
Manes.06G100700 Manihot esculenta HOM05D006519 ORTHO05D008306 4.7e-56 222.2 191 60.2
MD14G1186100 Malus domestica HOM05D006519 ORTHO05D008306 1.0e-55 221.1 211 55.9
MD14G1186900 Malus domestica HOM05D006519 ORTHO05D008306 1.2e-54 217.6 169 62.7
Nitab4.5_0001642g0020 Nicotiana tabacum HOM05D006519 ORTHO05D008306 1.6e-48 197.2 133 71.4
MD13G1183500 Malus domestica HOM05D006519 ORTHO05D008306 2.8e-48 196.4 161 59.6
Hma1.2p1_0002F.1_g002800 Hydrangea macrophylla HOM05D006519 ORTHO05D008306 3.4e-46 189.5 160 58.8
AagrBONN_evm.TU.Sc2ySwM_228.2029 Anthoceros agrestis HOM05D006519 ORTHO05D008306 2.2e-45 186.8 170 58.2
Glyma.17G093302 Glycine max HOM05D006519 ORTHO05D008306 4.9e-45 185.7 102 89.2
Cre09.g394584 Chlamydomonas reinhardtii HOM05D006519 ORTHO05D008306 7.8e-43 178.3 299 37.1
MCO15G300 Micromonas commoda HOM05D006519 ORTHO05D008306 3.9e-42 176.0 233 43.3
HPP92_010835 Vanilla planifolia HOM05D006519 ORTHO05D008306 5.0e-42 175.6 176 52.3
Actinidia19081 Actinidia chinensis HOM05D006519 ORTHO05D008306 1.4e-36 157.5 140 55.0
SEGI_15669 Sequoiadendron giganteum HOM05D006519 ORTHO05D008306 1.2e-35 154.5 133 57.9
arahy.Tifrunner.gnm1.ann1.KZGX7R Arachis hypogaea HOM05D006519 ORTHO05D008306 1.3e-34 151.0 104 74.0
Cpa.g.sc35.56 Carica papaya HOM05D006519 ORTHO05D008306 1.2e-32 144.4 117 63.2
arahy.Tifrunner.gnm1.ann1.J4WABN Arachis hypogaea HOM05D006519 ORTHO05D008306 1.5e-30 137.5 97 68.0
HanXRQChr11g0328331 Helianthus annuus HOM05D006519 ORTHO05D008306 2.3e-26 123.6 108 54.6
arahy.Tifrunner.gnm1.ann1.9L22J7 Arachis hypogaea HOM05D006519 ORTHO05D014446 1.1e-25 121.3 102 59.8
Nitab4.5_0001642g0010 Nicotiana tabacum HOM05D006519 ORTHO05D008306 4.3e-25 119.4 133 51.1
Os06g0239000 Oryza sativa ssp. japonica HOM05D006519 ORTHO05D008306 4.3e-25 119.4 100 59.0
C05p16930 Brassica napus HOM05D006519 ORTHO05D008306 1.2e-24 117.9 98 58.2
CDE06G0478 Ceratophyllum demersum HOM05D006519 ORTHO05D008306 1.1e-23 114.8 84 63.1
PRCOL_00000545 Prasinoderma coloniale HOM05D006519 ORTHO05D008306 4.2e-20 102.8 229 31.0
arahy.Tifrunner.gnm1.ann1.MFZI3Y Arachis hypogaea HOM05D005365 ORTHO05D006910 1.5e-17 94.4 83 61.4
CBR_g30328 Chara braunii HOM05D000019 ORTHO05D000048 9.6e-17 91.7 125 44.0
BcaC05g25762 Brassica carinata HOM05D006519 ORTHO05D008306 1.1e-15 88.2 79 54.4
arahy.Tifrunner.gnm1.ann1.RNN7F2 Arachis hypogaea HOM05D006519 ORTHO05D008306 3.4e-14 83.2 65 63.1
arahy.Tifrunner.gnm1.ann1.4TMU9W Arachis hypogaea HOM05D005365 ORTHO05D006910 5.8e-14 82.4 67 62.7
SEGI_16810 Sequoiadendron giganteum HOM05D006519 ORTHO05D008306 1.1e-12 78.2 50 70.0
arahy.Tifrunner.gnm1.ann1.PY279F Arachis hypogaea HOM05D006519 ORTHO05D008306 9.3e-12 75.1 67 62.7
Potri.015G071001 Populus trichocarpa HOM05D006519 ORTHO05D008306 2.7e-11 73.6 54 64.8
Dinv20697 Davidia involucrata HOM05D006519 ORTHO05D008306 1.3e-10 71.2 126 38.9


User provided reference genes

Program Settings