Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21851_v3 Cicer arietinum L. HOM05D005796 ORTHO05D007054 3.8e-120 434.9 225 100.0
TPR.G38380 Trifolium pratense HOM05D005796 ORTHO05D007054 4.0e-93 345.1 242 77.3
Medtr4g107630 Medicago truncatula HOM05D005796 ORTHO05D007054 3.5e-89 332.0 222 78.8
Lj4g0017253 Lotus japonicus HOM05D005796 ORTHO05D007054 1.0e-80 303.9 246 68.7
arahy.Tifrunner.gnm1.ann1.U2VSD4 Arachis hypogaea HOM05D005796 ORTHO05D007054 3.6e-78 295.4 224 68.8
arahy.Tifrunner.gnm1.ann1.NXA9BP Arachis hypogaea HOM05D005796 ORTHO05D007054 8.1e-78 294.3 224 67.9
Phvul.003G193000 Phaseolus vulgaris HOM05D005796 ORTHO05D007054 5.8e-76 288.1 247 66.4
Glyma.17G096600 Glycine max HOM05D005796 ORTHO05D007054 1.3e-75 287.0 237 67.5
VMungo1215G0702 Vigna mungo HOM05D005796 ORTHO05D007054 4.1e-74 282.0 234 66.2
Lalb_Chr13g0303431 Lupinus albus HOM05D005796 ORTHO05D007054 1.2e-73 280.4 220 67.7
TAR481G0014 Trochodendron aralioides HOM05D005796 ORTHO05D007054 1.2e-73 280.4 187 72.7
Dinv38663 Davidia involucrata HOM05D005796 ORTHO05D007054 3.3e-71 272.3 188 71.3
Duzib084G0674 Durio zibethinus HOM05D005796 ORTHO05D007054 2.1e-70 269.6 189 70.9
Thecc.03G078500 Theobroma cacao HOM05D005796 ORTHO05D007054 2.8e-70 269.2 220 64.1
Manes.14G074300 Manihot esculenta HOM05D005796 ORTHO05D007054 3.6e-70 268.9 183 71.6
TWI60G1143 Tripterygium wilfordii HOM05D005796 ORTHO05D007054 8.1e-70 267.7 185 69.7
CiPaw.11G037800 Carya illinoinensis HOM05D005796 ORTHO05D007054 1.4e-69 266.9 191 69.1
Prupe.5G185800 Prunus persica HOM05D005796 ORTHO05D007054 1.8e-69 266.5 186 68.8
GSVIVG01008066001 Vitis vinifera HOM05D005796 ORTHO05D007054 1.8e-69 266.5 215 64.7
Ciclev10021819m.g Citrus clementina HOM05D005796 ORTHO05D007054 2.4e-69 266.2 186 70.4
Atru.chr9.2321 Acer truncatum HOM05D005796 ORTHO05D007054 6.8e-69 264.6 181 70.7
Actinidia04922 Actinidia chinensis HOM05D005796 ORTHO05D007054 6.8e-69 264.6 189 67.2
CANSAT80G0862 Cannabis sativa HOM05D005796 ORTHO05D007054 8.9e-69 264.2 186 68.8
MD14G1193900 Malus domestica HOM05D005796 ORTHO05D007054 5.8e-68 261.5 186 68.8
Migut.D01857 Erythranthe guttata HOM05D005796 ORTHO05D007054 9.9e-68 260.8 203 61.1
MD06G1187500 Malus domestica HOM05D005796 ORTHO05D007054 1.3e-67 260.4 186 68.8
Peaxi162Scf00009g00426 Petunia axillaris HOM05D005796 ORTHO05D007054 2.9e-67 259.2 186 68.8
Potri.015G065500 Populus trichocarpa HOM05D005796 ORTHO05D007054 4.9e-67 258.5 183 67.2
Gohir.A07G065400 Gossypium hirsutum HOM05D005796 ORTHO05D007054 1.9e-66 256.5 187 65.8
RcHm_v2.0_Chr7g0180561 Rosa chinensis HOM05D005796 ORTHO05D007054 4.2e-66 255.4 179 68.2
FAN13G2643 Fragaria x ananassa HOM05D005796 ORTHO05D007054 5.4e-66 255.0 183 66.7
Sc12g0006170 Simmondsia chinensis HOM05D005796 ORTHO05D007054 5.4e-66 255.0 223 61.9
Gorai.001G073800 Gossypium raimondii HOM05D005796 ORTHO05D007054 7.1e-66 254.6 225 58.7
Hma1.2p1_0002F.1_g003270 Hydrangea macrophylla HOM05D005796 ORTHO05D007054 7.1e-66 254.6 204 61.3
Cc04_g15610 Coffea canephora HOM05D005796 ORTHO05D007054 9.3e-66 254.2 189 66.1
AUR62008352 Chenopodium quinoa HOM05D005796 ORTHO05D007054 1.2e-65 253.8 186 65.1
Sopen03g032340 Solanum pennellii HOM05D005796 ORTHO05D007054 3.5e-65 252.3 172 69.2
EL10Ac5g10940 Beta vulgaris HOM05D005796 ORTHO05D007054 4.6e-65 251.9 177 66.1
ClCG01G014370 Citrullus lanatus HOM05D005796 ORTHO05D007054 4.6e-65 251.9 227 58.6
DCAR_026077 Daucus carota HOM05D005796 ORTHO05D007054 7.8e-65 251.1 187 64.7
MSTRG.4407 Avicennia marina HOM05D005796 ORTHO05D007054 1.7e-64 250.0 219 60.3
Solyc03g113280.3 Solanum lycopersicum HOM05D005796 ORTHO05D007054 1.7e-64 250.0 172 68.6
SGA_v2.0_scaffold7G04086 Striga asiatica HOM05D005796 ORTHO05D007054 1.7e-64 250.0 179 67.6
Nitab4.5_0005402g0010 Nicotiana tabacum HOM05D005796 ORTHO05D007054 8.7e-64 247.7 231 55.4
FAN18G3372 Fragaria x ananassa HOM05D005796 ORTHO05D007054 1.1e-63 247.3 199 61.8
Nitab4.5_0004605g0110 Nicotiana tabacum HOM05D005796 ORTHO05D007054 1.9e-63 246.5 232 55.2
ATR0665G316 Amborella trichopoda HOM05D005796 ORTHO05D007054 2.5e-63 246.1 204 59.3
MELO3C002210.2 Cucumis melo HOM05D005796 ORTHO05D007054 3.3e-63 245.7 184 65.8
FAN04G0326 Fragaria x ananassa HOM05D005796 ORTHO05D007054 3.3e-63 245.7 202 60.9
Aa31LG11G960 Aethionema arabicum HOM05D005796 ORTHO05D007054 4.3e-63 245.4 187 59.4
PGSC0003DMG400025332 Solanum tuberosum HOM05D005796 ORTHO05D007054 4.3e-63 245.4 183 65.0
ECA247G3495 Erigeron canadensis HOM05D005796 ORTHO05D007054 5.6e-63 245.0 185 64.3
Sed0020047 Sechium edule HOM05D005796 ORTHO05D007054 7.3e-63 244.6 176 67.6
CsaV3_1G007940 Cucumis sativus L. HOM05D005796 ORTHO05D007054 9.6e-63 244.2 235 55.7
AL5G27300 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 1.3e-62 243.8 177 65.0
PSO017G2472 Papaver somniferum HOM05D005796 ORTHO05D007054 1.3e-62 243.8 206 57.3
FAN08G2559 Fragaria x ananassa HOM05D005796 ORTHO05D007054 2.8e-62 242.7 199 60.8
Hund02671 Selenicereus undatus HOM05D005796 ORTHO05D007054 2.8e-62 242.7 186 64.5
Carub.0005s1409 Capsella rubella HOM05D005796 ORTHO05D007054 3.6e-62 242.3 193 60.6
Cpa.g.sc414.2 Carica papaya HOM05D005796 ORTHO05D007054 6.2e-62 241.5 180 66.1
Oeu048731.1 Olea europaea HOM05D005796 ORTHO05D007054 6.2e-62 241.5 205 60.0
HanXRQChr02g0045201 Helianthus annuus HOM05D005796 ORTHO05D007054 1.1e-61 240.7 188 62.8
MBI03_g20464_MAGBIO Magnolia biondii HOM05D005796 ORTHO05D007054 1.8e-61 240.0 217 58.5
PSO478G3339 Papaver somniferum HOM05D005796 ORTHO05D007054 1.8e-61 240.0 206 56.3
Sp5g14000 Schrenkiella parvula HOM05D005796 ORTHO05D007054 3.1e-61 239.2 167 66.5
Eucgr.B00422 Eucalyptus grandis HOM05D005796 ORTHO05D007054 4.0e-61 238.8 163 69.9
BolC9t53794H Brassica oleracea HOM05D005796 ORTHO05D007054 5.3e-61 238.4 192 58.9
A09p07830 Brassica napus HOM05D005796 ORTHO05D007054 6.9e-61 238.0 192 57.8
BraA09t36434Z Brassica rapa HOM05D005796 ORTHO05D007054 6.9e-61 238.0 192 57.8
BcaC04g23395 Brassica carinata HOM05D005796 ORTHO05D007054 9.0e-61 237.7 192 58.3
CARHR156700 Cardamine hirsuta HOM05D005796 ORTHO05D007054 9.0e-61 237.7 177 63.3
Sp2g25890 Schrenkiella parvula HOM05D005796 ORTHO05D007054 1.2e-60 237.3 182 59.3
THA.LOC104821456 Tarenaya hassleriana HOM05D005796 ORTHO05D007054 1.2e-60 237.3 183 61.2
AT3G47980 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 2.0e-60 236.5 177 63.8
AT5G62720 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 2.0e-60 236.5 182 59.3
Carub.0008s2345 Capsella rubella HOM05D005796 ORTHO05D007054 2.6e-60 236.1 181 60.2
CARHR276510 Cardamine hirsuta HOM05D005796 ORTHO05D007054 2.6e-60 236.1 182 61.0
CDE02G2117 Ceratophyllum demersum HOM05D005796 ORTHO05D007054 2.6e-60 236.1 210 55.7
BcaB02g09686 Brassica carinata HOM05D005796 ORTHO05D007054 3.4e-60 235.7 191 56.5
AL8G39690 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 5.8e-60 235.0 191 58.1
Lsat_1_v5_gn_1_10700 Lactuca sativa HOM05D005796 ORTHO05D007054 5.8e-60 235.0 195 60.0
BcaB05g22893 Brassica carinata HOM05D005796 ORTHO05D007054 7.6e-60 234.6 177 62.1
Gohir.D07G069900 Gossypium hirsutum HOM05D005796 ORTHO05D007054 9.9e-60 234.2 225 56.0
Aqoxy3G00785 Aquilegia oxysepala HOM05D005796 ORTHO05D007054 1.3e-59 233.8 223 54.7
Thhalv10004798m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 1.7e-59 233.4 182 58.2
BraA06t25896Z Brassica rapa HOM05D005796 ORTHO05D007054 3.8e-59 232.3 192 54.7
A01p25720 Brassica napus HOM05D005796 ORTHO05D007054 4.9e-59 231.9 177 60.5
C01p32410 Brassica napus HOM05D005796 ORTHO05D007054 6.4e-59 231.5 177 61.0
BolC1t03180H Brassica oleracea HOM05D005796 ORTHO05D007054 6.4e-59 231.5 177 61.0
BraA01t02488Z Brassica rapa HOM05D005796 ORTHO05D007054 8.4e-59 231.1 177 60.5
Sabra15G0090700 Salix brachista HOM05D005796 ORTHO05D007054 1.9e-58 229.9 170 65.3
BcaC01g02511 Brassica carinata HOM05D005796 ORTHO05D007054 4.2e-58 228.8 192 54.7
BolC3t18656H Brassica oleracea HOM05D005796 ORTHO05D007054 4.2e-58 228.8 192 54.7
unitig_899.g15402 Utricularia gibba HOM05D003955 ORTHO05D004684 4.2e-58 228.8 184 58.2
BraA06t25046Z Brassica rapa HOM05D005796 ORTHO05D007054 9.3e-58 227.6 191 60.2
A06p19660 Brassica napus HOM05D005796 ORTHO05D007054 7.9e-57 224.6 191 59.7
unitig_0.g783 Utricularia gibba HOM05D005796 ORTHO05D007054 1.0e-56 224.2 167 63.5
BcaNung01383 Brassica carinata HOM05D005796 ORTHO05D007054 6.6e-56 221.5 179 56.4
C03p64010 Brassica napus HOM05D000012 ORTHO05D002455 1.3e-54 217.2 180 55.6
A06p29510 Brassica napus HOM05D000012 ORTHO05D002455 1.6e-54 216.9 180 55.0
Os03g0684700 Oryza sativa ssp. japonica HOM05D005796 ORTHO05D007054 1.6e-54 216.9 154 65.6
SEGI_40570 Sequoiadendron giganteum HOM05D005796 ORTHO05D007054 1.6e-54 216.9 152 64.5
vmacro19431 Vaccinium macrocarpon HOM05D005796 ORTHO05D007054 1.6e-54 216.9 215 53.0
BcaB02g09676 Brassica carinata HOM05D005796 ORTHO05D007054 4.8e-54 215.3 177 57.1
AUR62021745 Chenopodium quinoa HOM05D005796 ORTHO05D007054 1.1e-53 214.2 144 70.8
Haze_07383 Corylus avellana HOM05D005796 ORTHO05D007054 1.3e-51 207.2 167 62.3
Zm00001eb217240 Zea mays HOM05D005796 ORTHO05D007054 2.4e-50 203.0 200 52.0
PGR083G2169 Punica granatum HOM05D005796 ORTHO05D007054 8.7e-48 194.5 188 53.7
Thhalv10010656m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 1.6e-46 190.3 194 52.6
COL.COLO4_37386 Corchorus olitorius HOM05D005796 ORTHO05D007054 8.1e-46 188.0 131 71.8
Lj9A459G48 Lonicera japonica HOM05D005796 ORTHO05D007054 3.4e-44 182.6 128 71.1
C09p08810 Brassica napus HOM05D005796 ORTHO05D007054 2.2e-43 179.9 155 56.8
SalBow7G0869 Salvia bowleyana HOM05D005796 ORTHO05D007054 6.5e-43 178.3 136 66.2
AagrBONN_evm.TU.Sc2ySwM_228.2536 Anthoceros agrestis HOM05D005796 ORTHO05D007054 5.5e-42 175.3 223 40.8
Mapoly0029s0058 Marchantia polymorpha HOM05D005796 ORTHO05D007054 9.3e-42 174.5 154 51.9
PGR083G0992 Punica granatum HOM05D005796 ORTHO05D007054 1.8e-40 170.2 170 52.9
Aa31LG4G16620 Aethionema arabicum HOM05D005796 ORTHO05D007054 1.3e-38 164.1 127 61.4
SMO356G0151 Selaginella moellendorffii HOM05D005796 ORTHO05D007054 3.7e-38 162.5 145 53.8
BcaB01g00857 Brassica carinata HOM05D005796 ORTHO05D007054 4.8e-38 162.2 141 60.3
BcaC09g49836 Brassica carinata HOM05D005796 ORTHO05D007054 6.9e-37 158.3 127 59.1
BcaNung07157 Brassica carinata HOM05D005796 ORTHO05D007054 6.9e-37 158.3 127 59.1
QL10p015509 Quercus lobata HOM05D005796 ORTHO05D007054 1.5e-36 157.1 95 76.8
Zm00001eb053360 Zea mays HOM05D005796 ORTHO05D007054 4.3e-31 139.0 139 50.4
Sabra12G0050500 Salix brachista HOM05D005796 ORTHO05D007054 6.3e-30 135.2 188 45.2
CAN.G4519.1 Capsicum annuum HOM05D005796 ORTHO05D007054 1.1e-29 134.4 82 76.8
FvH4_5g15530 Fragaria vesca HOM05D005796 ORTHO05D007054 1.3e-22 110.9 84 64.3
QL10p015507 Quercus lobata HOM05D005796 ORTHO05D007054 6.3e-22 108.6 91 61.5
Sed0018874 Sechium edule HOM05D005796 ORTHO05D007054 9.4e-18 94.7 113 49.6
Nn4g23032 Nelumbo nucifera HOM05D005796 ORTHO05D007054 6.3e-14 82.0 99 45.5
Glyma.05G030200 Glycine max HOM05D005796 ORTHO05D007054 3.1e-13 79.7 50 78.0
MCO14G168 Micromonas commoda HOM05D005796 ORTHO05D007054 7.0e-13 78.6 152 29.6
Cre06.g295826 Chlamydomonas reinhardtii HOM05D005796 ORTHO05D007054 6.5e-11 72.0 128 29.7
Rhsim08G0160200 Rhododendron simsii HOM05D005796 ORTHO05D007054 1.8e-08 63.9 49 61.2
C09p08830 Brassica napus HOM05D005796 ORTHO05D007054 1.3e-06 57.8 35 65.7


User provided reference genes

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