Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21826_v3 Cicer arietinum L. HOM05D006541 ORTHO05D008471 1.4e-243 845.9 435 100.0
Psat4g051480 Pisum sativum HOM05D006541 ORTHO05D008471 1.6e-215 752.7 434 88.2
TPR.G34732 Trifolium pratense HOM05D006541 ORTHO05D008471 1.0e-206 723.4 441 84.6
Medtr4g108590 Medicago truncatula HOM05D006541 ORTHO05D008471 1.4e-206 723.0 432 86.1
Phvul.003G190700 Phaseolus vulgaris HOM05D006541 ORTHO05D008471 1.8e-190 669.5 433 80.8
VMungo1215G1397 Vigna mungo HOM05D006541 ORTHO05D008471 5.2e-190 667.9 433 80.1
Glyma.17G099300 Glycine max HOM05D006541 ORTHO05D008471 4.9e-188 661.4 433 79.0
arahy.Tifrunner.gnm1.ann1.84ES4F Arachis hypogaea HOM05D006541 ORTHO05D008471 3.4e-181 638.6 435 76.8
arahy.Tifrunner.gnm1.ann1.ZY6HCY Arachis hypogaea HOM05D006541 ORTHO05D008471 5.8e-181 637.9 435 77.0
Lj4g0004556 Lotus japonicus HOM05D006541 ORTHO05D008471 1.5e-176 623.2 411 80.0
QL10p016702 Quercus lobata HOM05D006541 ORTHO05D008471 1.4e-171 606.7 433 73.7
Cfa018953 Carpinus fangiana HOM05D006541 ORTHO05D008471 4.4e-165 585.1 424 72.6
Lalb_Chr07g0178001 Lupinus albus HOM05D006541 ORTHO05D008471 1.2e-162 577.0 393 77.6
CiPaw.11G043400 Carya illinoinensis HOM05D006541 ORTHO05D008471 4.0e-158 562.0 408 71.3
Dinv38701 Davidia involucrata HOM05D006541 ORTHO05D008471 1.3e-153 547.0 433 67.2
GSVIVG01008019001 Vitis vinifera HOM05D006541 ORTHO05D008471 6.6e-153 544.7 433 66.5
Thecc.03G085100 Theobroma cacao HOM05D006541 ORTHO05D008471 2.4e-150 536.2 401 71.3
Duzib205G0457 Durio zibethinus HOM05D006541 ORTHO05D008471 3.1e-150 535.8 401 70.8
PGR083G1696 Punica granatum HOM05D006541 ORTHO05D008471 3.4e-149 532.3 430 65.6
Gohir.A03G066400 Gossypium hirsutum HOM05D006541 ORTHO05D008471 5.8e-149 531.6 401 71.1
Prupe.5G192200 Prunus persica HOM05D006541 ORTHO05D008471 5.8e-149 531.6 432 67.4
Atru.chr9.2260 Acer truncatum HOM05D006541 ORTHO05D008471 1.7e-148 530.0 404 71.0
MD14G1199100 Malus domestica HOM05D006541 ORTHO05D008471 6.4e-148 528.1 433 66.1
Ciclev10020397m.g Citrus clementina HOM05D006541 ORTHO05D008471 2.1e-146 523.1 413 68.8
RcHm_v2.0_Chr7g0181151 Rosa chinensis HOM05D006541 ORTHO05D008471 4.6e-146 521.9 433 66.3
Eucgr.B00491 Eucalyptus grandis HOM05D006541 ORTHO05D008471 1.3e-145 520.4 441 63.3
TWI60G0844 Tripterygium wilfordii HOM05D006541 ORTHO05D008471 1.3e-145 520.4 412 68.7
FAN04G2599 Fragaria x ananassa HOM05D006541 ORTHO05D008471 8.7e-145 517.7 432 64.6
TAR629G1448 Trochodendron aralioides HOM05D006541 ORTHO05D008471 7.3e-144 514.6 430 64.9
Gorai.003G096900 Gossypium raimondii HOM05D006541 ORTHO05D008471 9.6e-144 514.2 434 65.9
Gohir.D03G093000 Gossypium hirsutum HOM05D006541 ORTHO05D008471 1.3e-143 513.8 400 69.0
FAN18G0374 Fragaria x ananassa HOM05D006541 ORTHO05D008471 5.3e-142 508.4 432 64.1
Haze_07335 Corylus avellana HOM05D006541 ORTHO05D008471 7.6e-141 504.6 383 71.0
FAN08G2919 Fragaria x ananassa HOM05D006541 ORTHO05D008471 2.9e-140 502.7 432 63.9
MD06G1192400 Malus domestica HOM05D006541 ORTHO05D008471 4.9e-140 501.9 465 60.9
Hma1.2p1_0104F.1_g049970 Hydrangea macrophylla HOM05D006541 ORTHO05D008471 1.1e-139 500.7 393 67.2
Lj5A111T86 Lonicera japonica HOM05D006541 ORTHO05D008471 6.0e-138 495.0 410 66.3
FvH4_5g15050 Fragaria vesca HOM05D006541 ORTHO05D008471 1.0e-137 494.2 432 62.5
Rhsim08G0155500 Rhododendron simsii HOM05D006541 ORTHO05D008471 1.3e-137 493.8 378 67.7
Aqoxy3G03367 Aquilegia oxysepala HOM05D006541 ORTHO05D008471 6.7e-137 491.5 431 61.7
Nn4g23149 Nelumbo nucifera HOM05D006541 ORTHO05D008471 1.3e-135 487.3 435 61.6
Hund02657 Selenicereus undatus HOM05D006541 ORTHO05D008471 3.7e-135 485.7 432 62.3
TAR371G1054 Trochodendron aralioides HOM05D006541 ORTHO05D008471 3.7e-135 485.7 397 65.5
PSO063G0566 Papaver somniferum HOM05D006541 ORTHO05D008471 8.1e-135 484.6 431 61.3
THA.LOC104821445 Tarenaya hassleriana HOM05D006541 ORTHO05D008471 3.4e-133 479.2 434 60.1
MBI05_g08285_MAGBIO Magnolia biondii HOM05D006541 ORTHO05D008471 2.2e-132 476.5 434 59.7
Nitab4.5_0000842g0050 Nicotiana tabacum HOM05D006541 ORTHO05D008471 2.2e-132 476.5 449 57.7
Nitab4.5_0012137g0020 Nicotiana tabacum HOM05D006541 ORTHO05D008471 1.1e-131 474.2 449 57.7
Oeu006508.1 Olea europaea HOM05D006541 ORTHO05D008471 1.9e-131 473.4 400 62.8
CARHR156290 Cardamine hirsuta HOM05D006541 ORTHO05D008471 2.5e-131 473.0 431 59.6
DCAR_016545 Daucus carota HOM05D006541 ORTHO05D008471 5.5e-131 471.9 402 63.4
CAN.G837.10 Capsicum annuum HOM05D006541 ORTHO05D008471 1.2e-130 470.7 439 58.3
CANSAT25G3319 Cannabis sativa HOM05D006541 ORTHO05D008471 1.6e-130 470.3 436 58.3
AL5G26900 Arabidopsis lyrata HOM05D006541 ORTHO05D008471 2.7e-130 469.5 429 60.4
Lsat_1_v5_gn_1_13281 Lactuca sativa HOM05D006541 ORTHO05D008471 2.7e-130 469.5 395 63.3
A06p20010 Brassica napus HOM05D006541 ORTHO05D008471 3.5e-130 469.2 431 61.0
BraA06t25087Z Brassica rapa HOM05D006541 ORTHO05D008471 3.5e-130 469.2 431 61.0
AT3G47610 Arabidopsis thaliana HOM05D006541 ORTHO05D008471 6.0e-130 468.4 429 60.1
AUR62021701 Chenopodium quinoa HOM05D006541 ORTHO05D008471 7.9e-130 468.0 430 58.4
BolC3t19470H Brassica oleracea HOM05D006541 ORTHO05D008471 1.3e-129 467.2 431 60.3
AUR62008395 Chenopodium quinoa HOM05D006541 ORTHO05D008471 2.3e-129 466.5 430 58.1
BcaC01g01798 Brassica carinata HOM05D006541 ORTHO05D008471 5.1e-129 465.3 429 59.9
C03p71820 Brassica napus HOM05D006541 ORTHO05D008471 5.1e-129 465.3 429 59.9
Peaxi162Scf00274g00732 Petunia axillaris HOM05D006541 ORTHO05D008471 5.1e-129 465.3 449 58.6
Carub.0005s1374 Capsella rubella HOM05D006541 ORTHO05D008471 6.7e-129 464.9 431 59.6
Thhalv10010423m.g Eutrema salsugineum HOM05D006541 ORTHO05D008471 8.7e-129 464.5 429 59.2
Sabra12G0049100 Salix brachista HOM05D006541 ORTHO05D008471 1.5e-128 463.8 487 56.5
Sp5g14300 Schrenkiella parvula HOM05D006541 ORTHO05D008471 1.9e-128 463.4 429 60.1
ClCG04G012330 Citrullus lanatus HOM05D006541 ORTHO05D008471 4.3e-128 462.2 375 66.9
Cc04_g16740 Coffea canephora HOM05D006541 ORTHO05D008471 1.3e-127 460.7 400 63.0
BcaB01g00902 Brassica carinata HOM05D006541 ORTHO05D008471 6.2e-127 458.4 425 59.8
HanXRQChr02g0041061 Helianthus annuus HOM05D006541 ORTHO05D008471 8.2e-127 458.0 399 60.9
Sc12g0006320 Simmondsia chinensis HOM05D006541 ORTHO05D008471 8.2e-127 458.0 431 59.9
Potri.012G068900 Populus trichocarpa HOM05D006541 ORTHO05D008471 2.4e-126 456.4 395 64.3
Actinidia37633 Actinidia chinensis HOM05D006541 ORTHO05D008471 1.2e-125 454.1 403 61.8
CsaV3_1G005390 Cucumis sativus L. HOM05D006541 ORTHO05D008471 1.2e-125 454.1 379 65.4
CSS0042048 Camellia sinensis var. sinensis HOM05D006541 ORTHO05D008471 1.5e-125 453.8 416 61.1
Ah.11g048540 Amaranthus hybridus HOM05D006541 ORTHO05D008471 2.0e-125 453.4 430 57.9
Solyc03g116140.3 Solanum lycopersicum HOM05D006541 ORTHO05D008471 3.4e-125 452.6 420 60.2
Cpa.g.c35819 Carica papaya HOM05D006541 ORTHO05D008471 4.5e-125 452.2 365 67.1
MSTRG.11386 Avicennia marina HOM05D006541 ORTHO05D008471 5.8e-125 451.8 398 62.6
CSS0004518 Camellia sinensis var. sinensis HOM05D006541 ORTHO05D008471 1.7e-124 450.3 400 61.8
Sopen03g035110 Solanum pennellii HOM05D006541 ORTHO05D008471 8.4e-124 448.0 420 59.8
MELO3C001974.2 Cucumis melo HOM05D006541 ORTHO05D008471 1.4e-123 447.2 362 66.0
ECA247G0129 Erigeron canadensis HOM05D006541 ORTHO05D008471 1.9e-123 446.8 401 60.3
Migut.I00173 Erythranthe guttata HOM05D006541 ORTHO05D008471 1.2e-122 444.1 399 59.1
SGA_v2.0_scaffold25G10913 Striga asiatica HOM05D006541 ORTHO05D008471 1.3e-121 440.7 411 60.6
COL.COLO4_24520 Corchorus olitorius HOM05D000087 ORTHO05D008471 4.3e-120 435.6 394 62.7
EL10Ac5g10987 Beta vulgaris HOM05D006541 ORTHO05D008471 5.7e-120 435.3 404 59.2
Manes.06G093400 Manihot esculenta HOM05D006541 ORTHO05D008471 7.4e-120 434.9 363 68.0
PGSC0003DMG400019513 Solanum tuberosum HOM05D006541 ORTHO05D008471 7.4e-120 434.9 417 58.3
HPP92_016797 Vanilla planifolia HOM05D006541 ORTHO05D008471 9.0e-118 427.9 397 59.9
HPP92_016827 Vanilla planifolia HOM05D006541 ORTHO05D008471 2.6e-117 426.4 397 59.7
CDE06G2127 Ceratophyllum demersum HOM05D006541 ORTHO05D008471 6.5e-116 421.8 399 56.9
BcaB05g23063 Brassica carinata HOM05D006541 ORTHO05D008471 1.2e-114 417.5 426 56.1
Sed0004898 Sechium edule HOM05D006541 ORTHO05D008471 3.6e-114 416.0 349 64.8
unitig_0.g2528 Utricularia gibba HOM05D006541 ORTHO05D008471 4.8e-111 405.6 394 56.9
Hma1.2p1_0104F.1_g049980 Hydrangea macrophylla HOM05D006541 ORTHO05D008471 1.5e-109 400.6 343 63.6
ATR0598G034 Amborella trichopoda HOM05D006541 ORTHO05D008471 6.5e-108 395.2 396 55.6
Aa31LG4G16360 Aethionema arabicum HOM05D006541 ORTHO05D008471 1.0e-105 387.9 469 48.8
vmacro17549 Vaccinium macrocarpon HOM05D006541 ORTHO05D008471 2.4e-102 376.7 420 51.9
Actinidia04898 Actinidia chinensis HOM05D006541 ORTHO05D008471 2.4e-86 323.6 262 67.2
Zm00001eb312480 Zea mays HOM05D006541 ORTHO05D008471 8.0e-82 308.5 312 54.5
SEGI_30902 Sequoiadendron giganteum HOM05D006541 ORTHO05D008471 1.0e-81 308.1 368 48.9
Mapoly0060s0059 Marchantia polymorpha HOM05D006541 ORTHO05D003603 5.7e-80 302.4 455 42.6
Pp3c16_180 Physcomitrium patens HOM05D006541 ORTHO05D003603 1.8e-78 297.4 407 44.0
Pp3c16_188 Physcomitrium patens HOM05D006541 ORTHO05D003603 1.8e-78 297.4 407 44.0
AagrBONN_evm.TU.Sc2ySwM_228.4960 Anthoceros agrestis HOM05D006541 ORTHO05D008471 5.5e-75 285.8 427 42.6
Potri.003G168100 Populus trichocarpa HOM05D006541 ORTHO05D008471 1.6e-66 257.7 157 82.2
CBR_g8828 Chara braunii HOM05D003341 ORTHO05D003603 4.9e-39 166.4 512 29.9
Cpa.g.sc111.3 Carica papaya HOM05D006541 ORTHO05D008471 7.8e-37 159.1 122 67.2
Actinidia04899 Actinidia chinensis HOM05D006541 ORTHO05D008471 1.0e-36 158.7 122 64.8
SEGI_16548 Sequoiadendron giganteum HOM05D003341 ORTHO05D003603 3.6e-34 150.2 350 34.9
Os09g0413100 Oryza sativa ssp. japonica HOM05D006541 ORTHO05D008471 1.4e-30 138.3 146 49.3
Sed0007979 Sechium edule HOM05D006541 ORTHO05D008471 7.9e-21 105.9 87 62.1
Cre09.g412350 Chlamydomonas reinhardtii HOM05D003341 ORTHO05D003603 5.3e-17 93.2 187 38.0
PRCOL_00002459 Prasinoderma coloniale HOM05D006541 ORTHO05D008471 2.0e-16 91.3 150 38.7
Haze_07334 Corylus avellana HOM05D006541 ORTHO05D008471 2.6e-16 90.9 52 75.0
MELO3C035773.2 Cucumis melo HOM05D006541 ORTHO05D008471 5.1e-12 76.6 52 67.3
CsaV3_1G005410 Cucumis sativus L. HOM05D006541 ORTHO05D008471 5.1e-12 76.6 52 67.3
vmacro17551 Vaccinium macrocarpon HOM05D006541 ORTHO05D000277 4.3e-11 73.6 63 60.3
FAN09G1066 Fragaria x ananassa HOM05D007752 ORTHO05D009994 3.7e-10 70.5 90 52.2
Cfa027053 Carpinus fangiana HOM05D006541 ORTHO05D124901 1.1e-09 68.9 273 28.9
FAN14G0637 Fragaria x ananassa HOM05D006541 ORTHO05D008471 8.4e-07 59.3 90 46.7
SEGI_20393 Sequoiadendron giganteum HOM05D006541 ORTHO05D008471 7.2e-06 56.2 48 54.2


User provided reference genes

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