Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21789_v3 Cicer arietinum L. HOM05D006409 ORTHO05D008250 1.0e-160 570.1 306 100.0
TPR.G2042 Trifolium pratense HOM05D006409 ORTHO05D008250 1.0e-107 394.0 329 71.4
Medtr4g109330 Medicago truncatula HOM05D006409 ORTHO05D008250 1.1e-101 374.0 268 79.1
Psat4g048440 Pisum sativum HOM05D006409 ORTHO05D008250 2.0e-95 353.2 268 75.7
Lj4g0024886 Lotus japonicus HOM05D006409 ORTHO05D008250 7.1e-93 344.7 279 70.6
Glyma.17G076800 Glycine max HOM05D006409 ORTHO05D008250 4.9e-86 322.0 327 61.8
Glyma.05G022800 Glycine max HOM05D006409 ORTHO05D008250 4.2e-85 318.9 283 67.8
Phvul.L001604 Phaseolus vulgaris HOM05D006409 ORTHO05D008250 1.8e-80 303.5 282 65.2
VMungo1215G3198 Vigna mungo HOM05D006409 ORTHO05D008250 7.9e-76 288.1 282 63.1
arahy.Tifrunner.gnm1.ann1.PS4SMH Arachis hypogaea HOM05D006409 ORTHO05D008250 4.3e-74 282.3 331 55.9
Lalb_Chr13g0302951 Lupinus albus HOM05D006409 ORTHO05D008250 1.3e-70 270.8 327 54.7
CiPaw.11G050000 Carya illinoinensis HOM05D006409 ORTHO05D008250 6.4e-70 268.5 283 59.0
arahy.Tifrunner.gnm1.ann1.4D2E4C Arachis hypogaea HOM05D006409 ORTHO05D008250 4.2e-69 265.8 331 53.8
QL10p018676 Quercus lobata HOM05D006409 ORTHO05D008250 1.9e-66 256.9 329 51.1
Ciclev10020474m.g Citrus clementina HOM05D006409 ORTHO05D008250 1.2e-63 247.7 282 53.9
Dinv38786 Davidia involucrata HOM05D006409 ORTHO05D008250 3.4e-63 246.1 311 50.8
Prupe.5G201100 Prunus persica HOM05D006409 ORTHO05D008250 1.1e-61 241.1 313 49.8
FvH4_5g14277 Fragaria vesca HOM05D006409 ORTHO05D008250 1.2e-60 237.7 273 56.8
FAN13G1588 Fragaria x ananassa HOM05D006409 ORTHO05D008250 1.6e-60 237.3 324 50.6
FAN18G2755 Fragaria x ananassa HOM05D006409 ORTHO05D008250 4.6e-60 235.7 278 55.8
MD14G1208800 Malus domestica HOM05D006409 ORTHO05D008250 3.9e-59 232.6 315 49.2
PGR083G0341 Punica granatum HOM05D006409 ORTHO05D008250 1.1e-58 231.1 279 52.0
Cpa.g.sc94.9 Carica papaya HOM05D006409 ORTHO05D008250 7.4e-58 228.4 296 49.0
Potri.015G048900 Populus trichocarpa HOM05D006409 ORTHO05D008250 9.7e-58 228.0 327 46.8
Haze_07680 Corylus avellana HOM05D006409 ORTHO05D008250 8.2e-57 224.9 249 55.4
Cfa019299 Carpinus fangiana HOM05D006409 ORTHO05D008250 4.1e-56 222.6 310 47.1
Duzib084G0027 Durio zibethinus HOM05D006409 ORTHO05D008250 4.1e-56 222.6 279 51.3
TAR629G2567 Trochodendron aralioides HOM05D006409 ORTHO05D008250 4.5e-55 219.2 315 47.3
Sabra15G0078400 Salix brachista HOM05D006409 ORTHO05D008250 2.9e-54 216.5 310 45.8
Manes.14G084000 Manihot esculenta HOM05D006409 ORTHO05D008250 3.8e-54 216.1 322 46.0
Thecc.03G097200 Theobroma cacao HOM05D006409 ORTHO05D008250 1.6e-52 210.7 282 50.4
Cc00_g02320 Coffea canephora HOM05D006409 ORTHO05D008250 3.6e-52 209.5 276 50.4
Rhsim08G0148500 Rhododendron simsii HOM05D006409 ORTHO05D008250 3.6e-52 209.5 280 50.4
Eucgr.B00571 Eucalyptus grandis HOM05D006409 ORTHO05D008250 5.1e-51 205.7 277 48.4
Lj5A105T60 Lonicera japonica HOM05D006409 ORTHO05D008250 5.1e-51 205.7 288 50.0
Oeu014392.1 Olea europaea HOM05D006409 ORTHO05D006262 3.3e-50 203.0 289 47.4
Aqoxy3G03581 Aquilegia oxysepala HOM05D006409 ORTHO05D008250 5.7e-50 202.2 282 48.9
CANSAT80G1113 Cannabis sativa HOM05D006409 ORTHO05D008250 7.4e-50 201.8 283 48.4
Nitab4.5_0001961g0070 Nicotiana tabacum HOM05D006409 ORTHO05D008250 1.3e-49 201.1 279 45.5
Atru.chr9.377 Acer truncatum HOM05D006409 ORTHO05D008250 2.2e-49 200.3 247 50.6
FAN08G0388 Fragaria x ananassa HOM05D006409 ORTHO05D008250 3.7e-49 199.5 294 47.6
RcHm_v2.0_Chr7g0182601 Rosa chinensis HOM05D006409 ORTHO05D008250 4.1e-48 196.1 310 45.8
THA.LOC104818336 Tarenaya hassleriana HOM05D006409 ORTHO05D008250 5.3e-48 195.7 306 43.8
CANSAT80G0413 Cannabis sativa HOM05D006409 ORTHO05D008250 4.5e-47 192.6 279 47.3
MSTRG.22971 Avicennia marina HOM05D006409 ORTHO05D008250 5.9e-47 192.2 281 46.3
Actinidia04843 Actinidia chinensis HOM05D006409 ORTHO05D008250 4.2e-45 186.0 223 52.0
Sopen12g016610 Solanum pennellii HOM05D006409 ORTHO05D008250 4.2e-45 186.0 279 44.4
Actinidia09250 Actinidia chinensis HOM05D006409 ORTHO05D008250 5.5e-45 185.7 277 46.2
Gorai.008G196800 Gossypium raimondii HOM05D006409 ORTHO05D008250 1.2e-44 184.5 277 44.4
GSVIVG01007923001 Vitis vinifera HOM05D006409 ORTHO05D008250 1.2e-44 184.5 252 50.0
Gohir.D12G183500 Gossypium hirsutum HOM05D006409 ORTHO05D008250 2.1e-44 183.7 277 44.0
CsaV3_1G005860 Cucumis sativus L. HOM05D006409 ORTHO05D008250 3.6e-44 183.0 281 44.5
PGSC0003DMG400012806 Solanum tuberosum HOM05D006409 ORTHO05D008250 3.6e-44 183.0 296 42.6
MELO3C002015.2 Cucumis melo HOM05D006409 ORTHO05D008250 6.1e-44 182.2 281 44.1
TWI81G1094 Tripterygium wilfordii HOM05D006409 ORTHO05D008250 6.1e-44 182.2 281 47.0
vmacro17591 Vaccinium macrocarpon HOM05D006409 ORTHO05D008250 3.9e-43 179.5 366 39.6
COL.COLO4_22753 Corchorus olitorius HOM05D006409 ORTHO05D008250 4.4e-42 176.0 250 46.4
Nitab4.5_0005160g0050 Nicotiana tabacum HOM05D006409 ORTHO05D008250 9.7e-42 174.9 283 42.0
CAN.G172.10 Capsicum annuum HOM05D006409 ORTHO05D008250 1.3e-41 174.5 281 43.4
BcaNung06903 Brassica carinata HOM05D006409 ORTHO05D008250 2.8e-41 173.3 280 43.9
AL6G18220 Arabidopsis lyrata HOM05D006409 ORTHO05D008250 3.7e-41 172.9 281 42.3
AUR62021594 Chenopodium quinoa HOM05D006409 ORTHO05D008250 7.0e-40 168.7 282 42.6
AL8G37860 Arabidopsis lyrata HOM05D006409 ORTHO05D008250 2.0e-39 167.2 316 40.5
Gohir.A12G180800 Gossypium hirsutum HOM05D006409 ORTHO05D008250 2.0e-39 167.2 276 42.4
Solyc12g036300.3 Solanum lycopersicum HOM05D006409 ORTHO05D008250 2.6e-39 166.8 279 41.9
CARHR205310 Cardamine hirsuta HOM05D006409 ORTHO05D008250 3.5e-39 166.4 280 40.7
PSO478G4763 Papaver somniferum HOM05D006409 ORTHO05D008250 1.0e-38 164.9 276 43.5
Sp6g35060 Schrenkiella parvula HOM05D006409 ORTHO05D008250 1.3e-38 164.5 283 42.0
Carub.0008s2186 Capsella rubella HOM05D006409 ORTHO05D008250 2.9e-38 163.3 314 38.9
PSO302G0195 Papaver somniferum HOM05D006409 ORTHO05D008250 2.9e-38 163.3 276 43.1
AUR62008498 Chenopodium quinoa HOM05D006409 ORTHO05D008250 3.8e-38 162.9 285 41.4
ClCG04G011930 Citrullus lanatus HOM05D006409 ORTHO05D008250 8.5e-38 161.8 276 43.1
PSO017G5610 Papaver somniferum HOM05D006409 ORTHO05D008250 8.5e-38 161.8 276 42.8
Nn4g23374 Nelumbo nucifera HOM05D006409 ORTHO05D008250 1.1e-37 161.4 314 39.5
AT5G07890 Arabidopsis thaliana HOM05D006409 ORTHO05D008250 3.2e-37 159.8 280 40.4
A10p28660 Brassica napus HOM05D006409 ORTHO05D008250 4.2e-37 159.5 280 41.8
C03p03950 Brassica napus HOM05D006409 ORTHO05D008250 5.5e-37 159.1 283 42.8
BolC3t12932H Brassica oleracea HOM05D006409 ORTHO05D008250 5.5e-37 159.1 283 42.8
C09p68980 Brassica napus HOM05D006409 ORTHO05D006405 1.2e-36 157.9 281 41.3
BcaC06g32511 Brassica carinata HOM05D001913 ORTHO05D008250 2.1e-36 157.1 213 48.4
BcaB01g05645 Brassica carinata HOM05D006409 ORTHO05D008250 8.0e-36 155.2 283 41.7
BraA10t44915Z Brassica rapa HOM05D001913 ORTHO05D006405 3.9e-35 152.9 213 46.5
A03p03510 Brassica napus HOM05D006409 ORTHO05D008250 6.7e-35 152.1 280 42.1
BraA03t09701Z Brassica rapa HOM05D006409 ORTHO05D008250 6.7e-35 152.1 280 42.1
BolC9t59643H Brassica oleracea HOM05D006409 ORTHO05D008250 1.1e-34 151.4 213 46.5
AT5G61200 Arabidopsis thaliana HOM05D006409 ORTHO05D008250 1.5e-34 151.0 221 44.8
Carub.0006s0678 Capsella rubella HOM05D006409 ORTHO05D008250 1.5e-34 151.0 279 39.4
Thhalv10013673m.g Eutrema salsugineum HOM05D006409 ORTHO05D008250 1.5e-34 151.0 222 44.1
DCAR_026015 Daucus carota HOM05D006409 ORTHO05D008250 2.8e-33 146.7 188 49.5
Peaxi162Scf00106g00081 Petunia axillaris HOM05D006409 ORTHO05D008250 4.8e-33 146.0 283 37.1
SalBow5G3762 Salvia bowleyana HOM05D006409 ORTHO05D008250 4.1e-32 142.9 250 42.0
HanXRQChr09g0270151 Helianthus annuus HOM05D006409 ORTHO05D008250 5.9e-31 139.0 212 41.5
ECA232G2526 Erigeron canadensis HOM05D006409 ORTHO05D008250 7.7e-31 138.7 203 44.3
Ah.02g113920 Amaranthus hybridus HOM05D006409 ORTHO05D008250 1.5e-29 134.4 244 41.4
ATR0064G033 Amborella trichopoda HOM05D006409 ORTHO05D008250 3.6e-28 129.8 286 36.4
CDE06G0998 Ceratophyllum demersum HOM05D006409 ORTHO05D008250 4.4e-26 122.9 284 35.6
Sed0008489 Sechium edule HOM05D006409 ORTHO05D008250 4.4e-26 122.9 283 37.8
Sc04g0003080 Simmondsia chinensis HOM05D006409 ORTHO05D008250 4.8e-25 119.4 222 41.4
Zm00001eb108440 Zea mays HOM05D006409 ORTHO05D008250 8.3e-25 118.6 190 41.6
Migut.I00315 Erythranthe guttata HOM05D006409 ORTHO05D008250 1.8e-24 117.5 277 35.0
Os07g0598700 Oryza sativa ssp. japonica HOM05D006409 ORTHO05D008250 5.9e-23 112.5 273 35.9
Glyma.01G017150 Glycine max HOM05D006409 ORTHO05D008250 1.3e-22 111.3 94 67.0
Hund02605 Selenicereus undatus HOM05D006409 ORTHO05D008250 8.5e-22 108.6 305 32.5
Duzib068G0538 Durio zibethinus HOM05D006409 ORTHO05D008250 4.7e-20 102.8 164 45.1
EL10Ac5g11100 Beta vulgaris HOM05D006409 ORTHO05D008250 1.0e-19 101.7 168 41.7
C04p51620 Brassica napus HOM05D006409 ORTHO05D008250 1.8e-19 100.9 222 37.4
BcaC02g08698 Brassica carinata HOM05D006409 ORTHO05D008250 6.8e-19 99.0 221 37.1
BcaC02g08700 Brassica carinata HOM05D006409 ORTHO05D008250 3.4e-18 96.7 174 39.7
HanXRQChr16g0502261 Helianthus annuus HOM05D006409 ORTHO05D008250 3.4e-18 96.7 231 34.6
BcaC02g08699 Brassica carinata HOM05D006409 ORTHO05D008250 3.7e-17 93.2 153 41.2
SEGI_28191 Sequoiadendron giganteum HOM05D006409 ORTHO05D008250 7.7e-15 85.5 275 29.1
SEGI_37085 Sequoiadendron giganteum HOM05D006409 ORTHO05D008250 7.7e-15 85.5 275 29.1
C04p51590 Brassica napus HOM05D006409 ORTHO05D008250 8.9e-11 72.0 96 44.8
Lsat_1_v5_gn_4_110201 Lactuca sativa HOM05D006409 ORTHO05D008250 8.9e-11 72.0 177 29.9


User provided reference genes

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