Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21755_v3 Cicer arietinum L. HOM05D005253 ORTHO05D006058 3.7e-148 528.5 327 100.0
TPR.G1989 Trifolium pratense HOM05D005253 ORTHO05D006058 9.5e-112 407.5 332 70.5
Medtr4g109960 Medicago truncatula HOM05D005253 ORTHO05D006058 1.2e-111 407.1 332 68.7
TPR.G2086 Trifolium pratense HOM05D005253 ORTHO05D006058 1.2e-101 374.0 309 70.2
Glyma.05G018200 Glycine max HOM05D005253 ORTHO05D006058 1.5e-93 347.1 332 62.0
Glyma.17G081700 Glycine max HOM05D005253 ORTHO05D006058 2.0e-93 346.7 332 62.0
Lj4g0025893 Lotus japonicus HOM05D005253 ORTHO05D006058 9.6e-88 327.8 334 62.0
Psat4g046080 Pisum sativum HOM05D005253 ORTHO05D006058 5.4e-83 312.0 326 67.8
Lalb_Chr13g0302681 Lupinus albus HOM05D005253 ORTHO05D006058 1.3e-81 307.4 325 57.5
Phvul.003G182200 Phaseolus vulgaris HOM05D005253 ORTHO05D006058 7.6e-77 291.6 333 54.7
VMungo1215G3162 Vigna mungo HOM05D005253 ORTHO05D006058 6.0e-74 282.0 333 53.5
arahy.Tifrunner.gnm1.ann1.TSF3K2 Arachis hypogaea HOM05D005253 ORTHO05D006058 2.3e-73 280.0 342 50.9
TWI60G1362 Tripterygium wilfordii HOM05D005253 ORTHO05D006058 1.4e-67 260.8 335 46.6
arahy.Tifrunner.gnm1.ann1.399KXC Arachis hypogaea HOM05D005253 ORTHO05D006058 7.1e-67 258.5 342 48.2
Rhsim08G0142100 Rhododendron simsii HOM05D005253 ORTHO05D006058 4.6e-66 255.8 336 49.4
ClCG04G011560 Citrullus lanatus HOM05D005253 ORTHO05D006058 7.9e-66 255.0 345 55.9
Ciclev10020920m.g Citrus clementina HOM05D005253 ORTHO05D006058 2.5e-64 250.0 339 47.8
GSVIVG01008154001 Vitis vinifera HOM05D005253 ORTHO05D006058 4.8e-63 245.7 345 46.7
TWI81G0215 Tripterygium wilfordii HOM05D005253 ORTHO05D006058 5.3e-62 242.3 331 45.6
vmacro17641 Vaccinium macrocarpon HOM05D005253 ORTHO05D006058 1.2e-61 241.1 366 44.5
MELO3C002054.2 Cucumis melo HOM05D005253 ORTHO05D006058 2.0e-61 240.4 350 55.4
Cfa017731 Carpinus fangiana HOM05D005253 ORTHO05D006058 1.7e-60 237.3 338 46.4
Haze_18511 Corylus avellana HOM05D005253 ORTHO05D006058 1.7e-60 237.3 339 46.9
Cpa.g.sc3.232 Carica papaya HOM05D005253 ORTHO05D006058 3.2e-59 233.0 340 53.5
Gohir.D07G063700 Gossypium hirsutum HOM05D005253 ORTHO05D006058 7.9e-58 228.4 342 41.8
Potri.004G107000 Populus trichocarpa HOM05D005253 ORTHO05D006058 1.8e-57 227.3 341 44.3
Dinv38642 Davidia involucrata HOM05D005253 ORTHO05D006058 3.0e-57 226.5 347 43.2
CANSAT80G0823 Cannabis sativa HOM05D005253 ORTHO05D006058 1.5e-56 224.2 330 44.5
MD14G1216600 Malus domestica HOM05D005253 ORTHO05D006058 3.3e-56 223.0 334 46.4
Duzib205G1609 Durio zibethinus HOM05D005253 ORTHO05D006058 4.3e-56 222.6 339 42.5
Gorai.001G067300 Gossypium raimondii HOM05D005253 ORTHO05D006058 1.3e-55 221.1 342 43.3
MD06G1205700 Malus domestica HOM05D005253 ORTHO05D006058 6.9e-54 215.3 334 45.8
MSTRG.9581 Avicennia marina HOM05D005253 ORTHO05D006058 3.4e-53 213.0 331 42.9
Sed0023471 Sechium edule HOM05D005253 ORTHO05D006058 4.5e-53 212.6 345 40.9
FAN13G1214 Fragaria x ananassa HOM05D005253 ORTHO05D006058 7.7e-53 211.8 324 44.1
SGA_v2.0_scaffold65G22104 Striga asiatica HOM05D005253 ORTHO05D006058 3.8e-52 209.5 331 43.5
FvH4_5g13401 Fragaria vesca HOM05D005253 ORTHO05D006058 2.5e-51 206.8 329 44.7
Thhalv10014100m.g Eutrema salsugineum HOM05D005253 ORTHO05D006058 3.2e-51 206.5 335 40.3
Duzib068G0534 Durio zibethinus HOM05D005253 ORTHO05D006058 5.5e-51 205.7 336 41.1
Gohir.A09G243900 Gossypium hirsutum HOM05D005253 ORTHO05D006058 1.2e-50 204.5 336 40.5
FAN08G1625 Fragaria x ananassa HOM05D005253 ORTHO05D006058 2.7e-50 203.4 327 42.5
Prupe.5G210000 Prunus persica HOM05D005253 ORTHO05D006058 3.6e-50 203.0 334 44.3
Gohir.A07G058832 Gossypium hirsutum HOM05D005253 ORTHO05D006058 4.6e-50 202.6 342 39.5
CsaV3_1G006260 Cucumis sativus L. HOM05D005253 ORTHO05D006058 1.0e-49 201.4 343 51.6
PSO017G7367 Papaver somniferum HOM05D005253 ORTHO05D006058 1.4e-49 201.1 336 40.8
Glyma.04G159100 Glycine max HOM05D005253 ORTHO05D006058 1.8e-49 200.7 319 41.4
Sabra04G0074900 Salix brachista HOM05D005253 ORTHO05D006058 2.3e-49 200.3 284 55.6
FAN18G4071 Fragaria x ananassa HOM05D005253 ORTHO05D006058 6.7e-49 198.7 345 43.2
MBI14_g08108_MAGBIO Magnolia biondii HOM05D005253 ORTHO05D006058 6.7e-49 198.7 337 41.2
THA.LOC104818357 Tarenaya hassleriana HOM05D005253 ORTHO05D006058 3.3e-48 196.4 331 40.2
Manes.14G089100 Manihot esculenta HOM05D005253 ORTHO05D006058 4.3e-48 196.1 347 40.6
Aqoxy3G03749 Aquilegia oxysepala HOM05D005253 ORTHO05D006058 7.4e-48 195.3 344 45.3
RcHm_v2.0_Chr7g0183731 Rosa chinensis HOM05D005253 ORTHO05D006058 9.7e-48 194.9 331 42.9
Hma1.2p1_0060F.1_g032740 Hydrangea macrophylla HOM05D005253 ORTHO05D006058 2.8e-47 193.4 373 38.6
AL6G18490 Arabidopsis lyrata HOM05D005253 ORTHO05D006058 6.3e-47 192.2 326 39.6
Gorai.006G268700 Gossypium raimondii HOM05D005253 ORTHO05D006058 1.1e-46 191.4 336 39.6
Hund09956 Selenicereus undatus HOM05D005253 ORTHO05D006058 1.1e-46 191.4 332 41.3
AT5G08120 Arabidopsis thaliana HOM05D005253 ORTHO05D006058 1.4e-46 191.0 326 38.7
SHI17413 Sapria himalayana HOM05D005253 ORTHO05D006058 1.4e-46 191.0 325 39.7
Atru.chr4.1592 Acer truncatum HOM05D005253 ORTHO05D006058 3.1e-46 189.9 342 49.4
Peaxi162Scf00365g00114 Petunia axillaris HOM05D005253 ORTHO05D006058 5.3e-46 189.1 323 40.6
SalBow7G2030 Salvia bowleyana HOM05D005253 ORTHO05D006058 9.1e-46 188.3 350 38.9
Lj1g0009577 Lotus japonicus HOM05D005253 ORTHO05D006058 1.2e-45 188.0 311 43.1
Sc04g0003900 Simmondsia chinensis HOM05D005253 ORTHO05D006058 1.5e-45 187.6 304 40.8
CSS0036905 Camellia sinensis var. sinensis HOM05D005253 ORTHO05D006058 2.0e-45 187.2 336 40.5
CARHR205070 Cardamine hirsuta HOM05D005253 ORTHO05D006058 2.0e-45 187.2 336 40.5
Manes.06G080800 Manihot esculenta HOM05D005253 ORTHO05D006058 5.9e-45 185.7 341 38.7
Gohir.D09G244600 Gossypium hirsutum HOM05D005253 ORTHO05D006058 2.2e-44 183.7 338 38.5
arahy.Tifrunner.gnm1.ann1.4B3W67 Arachis hypogaea HOM05D005253 ORTHO05D006058 2.9e-44 183.3 298 54.0
Lsat_1_v5_gn_5_23380 Lactuca sativa HOM05D005253 ORTHO05D006058 2.9e-44 183.3 345 39.1
BraA10t44904Z Brassica rapa HOM05D005253 ORTHO05D006058 1.9e-43 180.6 335 37.3
Cc04_g08280 Coffea canephora HOM05D005253 ORTHO05D006058 4.2e-43 179.5 349 41.0
Dinv17459 Davidia involucrata HOM05D005253 ORTHO05D006058 4.2e-43 179.5 315 41.0
ATR0691G224 Amborella trichopoda HOM05D005253 ORTHO05D006058 5.5e-43 179.1 309 38.8
COL.COLO4_27496 Corchorus olitorius HOM05D005253 ORTHO05D006058 7.2e-43 178.7 340 37.9
Migut.D01615 Erythranthe guttata HOM05D005253 ORTHO05D006058 1.2e-42 177.9 333 39.3
PSO478G2666 Papaver somniferum HOM05D005253 ORTHO05D006058 1.6e-42 177.6 336 39.3
BcaB08g37285 Brassica carinata HOM05D005253 ORTHO05D006058 2.7e-42 176.8 334 36.8
C09p68830 Brassica napus HOM05D005253 ORTHO05D006058 2.7e-42 176.8 334 36.8
Aa31LG3G18420 Aethionema arabicum HOM05D005253 ORTHO05D006058 3.6e-42 176.4 337 46.6
Oeu014427.1 Olea europaea HOM05D005253 ORTHO05D006058 4.7e-42 176.0 331 40.2
QL10p020742 Quercus lobata HOM05D005253 ORTHO05D006058 7.9e-42 175.3 506 31.2
DCAR_010175 Daucus carota HOM05D005253 ORTHO05D006058 2.3e-41 173.7 345 40.0
arahy.Tifrunner.gnm1.ann1.U6KDHT Arachis hypogaea HOM05D005253 ORTHO05D006058 3.0e-41 173.3 302 52.0
Nitab4.5_0002041g0040 Nicotiana tabacum HOM05D005253 ORTHO05D006058 5.1e-41 172.6 334 38.9
Sp6g34840 Schrenkiella parvula HOM05D005253 ORTHO05D006058 5.1e-41 172.6 335 40.3
ECA246G0831 Erigeron canadensis HOM05D005253 ORTHO05D006058 6.7e-41 172.2 340 36.2
Solyc03g114760.3 Solanum lycopersicum HOM05D005253 ORTHO05D006058 1.5e-40 171.0 335 37.9
Nn3g17535 Nelumbo nucifera HOM05D005253 ORTHO05D006058 3.3e-40 169.9 342 36.8
TAR371G0033 Trochodendron aralioides HOM05D005253 ORTHO05D006058 7.4e-40 168.7 342 36.8
BolC9t59630H Brassica oleracea HOM05D005253 ORTHO05D006058 9.7e-40 168.3 335 38.8
AUR62039667 Chenopodium quinoa HOM05D005253 ORTHO05D006058 9.7e-40 168.3 289 39.8
Sopen03g033840 Solanum pennellii HOM05D005253 ORTHO05D006058 9.7e-40 168.3 335 37.9
unitig_578.g15937 Utricularia gibba HOM05D005253 ORTHO05D006058 1.3e-39 167.9 329 36.5
EL10Ac5g11189 Beta vulgaris HOM05D005253 ORTHO05D006058 1.7e-39 167.5 292 40.4
Nitab4.5_0002467g0110 Nicotiana tabacum HOM05D005253 ORTHO05D006058 2.8e-39 166.8 336 36.6
Peaxi162Scf00017g03254 Petunia axillaris HOM05D005253 ORTHO05D006058 2.8e-39 166.8 342 37.4
Ah.11g047400 Amaranthus hybridus HOM05D005253 ORTHO05D006058 3.7e-39 166.4 297 40.4
Nitab4.5_0005994g0050 Nicotiana tabacum HOM05D005253 ORTHO05D006058 4.8e-39 166.0 332 38.0
Prupe.8G074000 Prunus persica HOM05D005253 ORTHO05D006058 1.1e-38 164.9 254 42.1
Ah.02g114240 Amaranthus hybridus HOM05D005253 ORTHO05D006058 1.8e-38 164.1 317 38.8
PGSC0003DMG400024524 Solanum tuberosum HOM05D005253 ORTHO05D006058 4.1e-38 162.9 335 37.0
PGR044G0085 Punica granatum HOM05D005253 ORTHO05D006058 1.2e-37 161.4 322 37.0
Hund02544 Selenicereus undatus HOM05D005253 ORTHO05D006058 1.2e-37 161.4 312 37.8
Aqoxy3G00549 Aquilegia oxysepala HOM05D005253 ORTHO05D006058 1.0e-36 158.3 341 40.2
unitig_8.g4498 Utricularia gibba HOM05D005253 ORTHO05D006058 1.5e-35 154.5 328 35.4
A10p28550 Brassica napus HOM05D005253 ORTHO05D006058 3.6e-34 149.8 335 33.1
PSO782G3834 Papaver somniferum HOM05D005253 ORTHO05D006058 4.0e-33 146.4 336 35.7
Carub.0006s0700 Capsella rubella HOM05D005253 ORTHO05D006058 5.2e-33 146.0 347 33.1
Eucgr.K02550 Eucalyptus grandis HOM05D005253 ORTHO05D006058 2.0e-32 144.1 262 37.4
CDE05G1733 Ceratophyllum demersum HOM05D005253 ORTHO05D006058 4.4e-32 142.9 324 33.6
CAN.G982.39 Capsicum annuum HOM05D005253 ORTHO05D006058 1.7e-31 141.0 416 30.5
HanXRQChr05g0157441 Helianthus annuus HOM05D005253 ORTHO05D006058 8.2e-31 138.7 330 35.8
CiPaw.16G080100 Carya illinoinensis HOM05D005253 ORTHO05D006058 2.4e-30 137.1 260 37.7
Lj9C438G4 Lonicera japonica HOM05D005253 ORTHO05D006058 5.3e-30 136.0 316 34.8
AUR62032138 Chenopodium quinoa HOM05D005253 ORTHO05D006058 9.1e-30 135.2 266 36.5
PSO063G5368 Papaver somniferum HOM05D005253 ORTHO05D006058 1.2e-29 134.8 336 34.5
Thecc.03G108400 Theobroma cacao HOM05D005253 ORTHO05D006058 1.2e-29 134.8 237 38.0
HPP92_019902 Vanilla planifolia HOM05D005253 ORTHO05D006058 5.0e-28 129.4 295 34.6
TPR.G28909 Trifolium pratense HOM05D005253 ORTHO05D006058 7.2e-27 125.6 83 77.1
Zm00001eb380690 Zea mays HOM05D005253 ORTHO05D006058 9.4e-27 125.2 285 31.9
BcaB08g37286 Brassica carinata HOM05D005460 ORTHO05D006058 5.2e-25 119.4 190 46.3
HanXRQChr02g0051141 Helianthus annuus HOM05D005253 ORTHO05D006058 5.2e-25 119.4 320 32.5
Zm00001eb280850 Zea mays HOM05D005253 ORTHO05D006058 2.6e-24 117.1 296 29.7
Os06g0284800 Oryza sativa ssp. japonica HOM05D005253 ORTHO05D006058 7.5e-24 115.5 287 41.1
HPP92_015550 Vanilla planifolia HOM05D005253 ORTHO05D006058 2.2e-23 114.0 295 32.2
Nitab4.5_0001797g0020 Nicotiana tabacum HOM05D005253 ORTHO05D006058 4.8e-23 112.8 254 35.4
Actinidia04794 Actinidia chinensis HOM05D005253 ORTHO05D006058 1.1e-22 111.7 105 60.0
CDE02G3817 Ceratophyllum demersum HOM05D005253 ORTHO05D006058 1.1e-22 111.7 322 30.1
Nn4g23536 Nelumbo nucifera HOM05D005253 ORTHO05D006058 6.5e-20 102.4 90 57.8
Actinidia10441 Actinidia chinensis HOM05D005253 ORTHO05D006058 1.2e-18 98.2 127 47.2
Oeu014549.1 Olea europaea HOM05D005253 ORTHO05D006058 1.4e-17 94.7 104 52.9
Oeu051243.1 Olea europaea HOM05D005253 ORTHO05D006058 4.9e-15 86.3 86 51.2
Nn4g23537 Nelumbo nucifera HOM05D005253 ORTHO05D006058 1.4e-14 84.7 94 50.0
Peaxi162Scf00091g00143 Petunia axillaris HOM05D005253 ORTHO05D006058 1.9e-11 74.3 236 29.7
TAR629G1609 Trochodendron aralioides HOM05D004464 ORTHO05D005135 7.2e-11 72.4 276 25.4
Os09g0476000 Oryza sativa ssp. japonica HOM05D005253 ORTHO05D006058 9.5e-11 72.0 193 27.5
SEGI_36320 Sequoiadendron giganteum HOM05D005253 ORTHO05D006058 1.2e-10 71.6 364 23.1
Gohir.D13G101706 Gossypium hirsutum HOM05D005253 ORTHO05D006058 8.9e-09 65.5 79 53.2
PSO063G4277 Papaver somniferum HOM05D005253 ORTHO05D006058 3.7e-07 60.1 84 44.0
Actinidia04795 Actinidia chinensis HOM05D005253 ORTHO05D006058 8.3e-07 58.9 161 29.8
BraA02t04942Z Brassica rapa HOM05D009919 ORTHO05D012044 3.2e-06 57.0 50 54.0
Zm00001eb315970 Zea mays HOM05D005253 ORTHO05D006058 4.1e-06 56.6 193 25.4


User provided reference genes

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