Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21735_v3 Cicer arietinum L. HOM05D006386 ORTHO05D007575 3.6e-132 474.9 244 100.0
Medtr4g112830 Medicago truncatula HOM05D006386 ORTHO05D007575 1.3e-100 370.2 245 78.4
TPR.G23873 Trifolium pratense HOM05D006386 ORTHO05D007575 4.0e-99 365.2 239 79.5
Medtr4g112610 Medicago truncatula HOM05D006386 ORTHO05D007575 6.0e-95 351.3 239 76.6
Lj6g0003397 Lotus japonicus HOM05D006386 ORTHO05D007575 1.3e-86 323.6 238 70.2
Phvul.002G142200 Phaseolus vulgaris HOM05D006386 ORTHO05D007575 2.2e-84 316.2 238 68.9
Phvul.003G180600 Phaseolus vulgaris HOM05D006386 ORTHO05D007575 6.9e-83 311.2 236 68.6
VMungo1215G2864 Vigna mungo HOM05D006386 ORTHO05D007575 2.6e-82 309.3 238 66.8
Glyma.17G083800 Glycine max HOM05D006386 ORTHO05D007575 2.9e-81 305.8 238 67.2
Glyma.05G016300 Glycine max HOM05D006386 ORTHO05D007575 1.5e-77 293.5 231 66.7
Lalb_Chr13g0302571 Lupinus albus HOM05D006386 ORTHO05D007575 1.8e-75 286.6 238 63.9
Psat4g044400 Pisum sativum HOM05D006386 ORTHO05D007575 5.0e-73 278.5 238 65.5
arahy.Tifrunner.gnm1.ann1.HL5ANR Arachis hypogaea HOM05D006386 ORTHO05D007575 1.4e-70 270.4 232 59.9
arahy.Tifrunner.gnm1.ann1.3Z7JIG Arachis hypogaea HOM05D006386 ORTHO05D007575 3.9e-70 268.9 237 58.2
arahy.Tifrunner.gnm1.ann1.X9R15Y Arachis hypogaea HOM05D006386 ORTHO05D007575 6.5e-65 251.5 254 54.3
COL.COLO4_08656 Corchorus olitorius HOM05D006386 ORTHO05D007575 5.2e-62 241.9 242 54.5
Duzib068G0691 Durio zibethinus HOM05D006386 ORTHO05D007575 8.8e-62 241.1 242 52.9
Gorai.007G040700 Gossypium raimondii HOM05D006386 ORTHO05D007575 2.0e-61 240.0 242 52.9
Thecc.03G113300 Theobroma cacao HOM05D006386 ORTHO05D007575 1.7e-60 236.9 242 52.9
Gohir.D11G038000 Gossypium hirsutum HOM05D006386 ORTHO05D007575 2.2e-60 236.5 242 52.5
FAN08G0928 Fragaria x ananassa HOM05D006386 ORTHO05D007575 5.3e-59 231.9 242 51.2
QL10p021984 Quercus lobata HOM05D006386 ORTHO05D007575 5.3e-59 231.9 244 53.3
RcHm_v2.0_Chr7g0184161 Rosa chinensis HOM05D006386 ORTHO05D007575 1.2e-58 230.7 241 50.6
Dinv36853 Davidia involucrata HOM05D006386 ORTHO05D007575 2.0e-58 229.9 242 51.2
FvH4_5g13000 Fragaria vesca HOM05D006386 ORTHO05D007575 2.0e-58 229.9 242 50.0
GSVIVG01008195001 Vitis vinifera HOM05D006386 ORTHO05D007575 7.7e-58 228.0 242 50.8
Gohir.A11G034600 Gossypium hirsutum HOM05D006386 ORTHO05D007575 1.0e-57 227.6 249 51.0
FAN13G1489 Fragaria x ananassa HOM05D006386 ORTHO05D007575 1.3e-57 227.3 242 50.4
FAN18G3466 Fragaria x ananassa HOM05D006386 ORTHO05D007575 1.3e-57 227.3 242 49.6
CANSAT80G2620 Cannabis sativa HOM05D006386 ORTHO05D007575 3.8e-57 225.7 248 50.0
Cfa019518 Carpinus fangiana HOM05D006386 ORTHO05D007575 1.5e-56 223.8 243 51.0
Ciclev10021913m.g Citrus clementina HOM05D006386 ORTHO05D007575 1.2e-55 220.7 242 48.3
CSS0007083 Camellia sinensis var. sinensis HOM05D006386 ORTHO05D007575 1.4e-54 217.2 242 48.3
Atru.chr9.671 Acer truncatum HOM05D006386 ORTHO05D007575 1.8e-54 216.9 240 45.8
CiPaw.16G081700 Carya illinoinensis HOM05D006386 ORTHO05D007575 8.8e-54 214.5 242 49.2
Potri.015G055500 Populus trichocarpa HOM05D006386 ORTHO05D007575 8.8e-54 214.5 241 47.3
Hma1.2p1_0340F.1_g130200 Hydrangea macrophylla HOM05D006386 ORTHO05D007575 7.5e-53 211.5 241 47.3
MD14G1218500 Malus domestica HOM05D006386 ORTHO05D007575 2.8e-52 209.5 242 49.2
Lj9A435T83 Lonicera japonica HOM05D006386 ORTHO05D007575 4.8e-52 208.8 235 49.4
Actinidia36923 Actinidia chinensis HOM05D006386 ORTHO05D007575 4.1e-51 205.7 242 43.8
Sed0015508 Sechium edule HOM05D006386 ORTHO05D007575 4.1e-51 205.7 241 49.4
TWI81G0025 Tripterygium wilfordii HOM05D006386 ORTHO05D007575 4.1e-51 205.7 242 47.1
Nitab4.5_0000646g0180 Nicotiana tabacum HOM05D006386 ORTHO05D007575 1.2e-50 204.1 241 44.4
Sopen03g033610 Solanum pennellii HOM05D006386 ORTHO05D007575 1.2e-50 204.1 241 44.4
PGSC0003DMG400024511 Solanum tuberosum HOM05D006386 ORTHO05D007575 2.0e-50 203.4 241 44.4
Manes.01G023400 Manihot esculenta HOM05D006386 ORTHO05D007575 2.7e-50 203.0 241 46.5
Solyc03g114520.3 Solanum lycopersicum HOM05D006386 ORTHO05D007575 1.0e-49 201.1 241 43.6
SalBow1G4471 Salvia bowleyana HOM05D006386 ORTHO05D007575 1.7e-49 200.3 238 44.1
THA.LOC104819388 Tarenaya hassleriana HOM05D006386 ORTHO05D007575 3.8e-49 199.1 242 46.7
Nitab4.5_0004342g0080 Nicotiana tabacum HOM05D006386 ORTHO05D007575 1.1e-48 197.6 241 44.0
AUR62032161 Chenopodium quinoa HOM05D006386 ORTHO05D007575 1.5e-48 197.2 240 43.8
Nn3g17620 Nelumbo nucifera HOM05D006386 ORTHO05D007575 3.2e-48 196.1 234 47.9
Hund02537 Selenicereus undatus HOM05D006386 ORTHO05D007575 4.2e-48 195.7 238 42.4
Oeu010193.1 Olea europaea HOM05D006386 ORTHO05D007575 1.2e-47 194.1 237 44.7
Sabra15G0080700 Salix brachista HOM05D006386 ORTHO05D007575 3.6e-47 192.6 268 42.5
TAR629G0047 Trochodendron aralioides HOM05D002187 ORTHO05D002243 1.4e-46 190.7 189 51.9
Sc04g0004070 Simmondsia chinensis HOM05D006386 ORTHO05D007575 3.0e-46 189.5 252 44.4
PGR044G0997 Punica granatum HOM05D006386 ORTHO05D007575 5.2e-46 188.7 242 44.6
Eucgr.K02638 Eucalyptus grandis HOM05D006386 ORTHO05D007575 2.6e-45 186.4 245 45.3
arahy.Tifrunner.gnm1.ann1.7DA3AY Arachis hypogaea HOM05D006386 ORTHO05D007575 5.7e-45 185.3 237 48.1
EL10Ac9g20981 Beta vulgaris HOM05D006386 ORTHO05D007575 5.7e-45 185.3 241 42.3
ClCG06G015230 Citrullus lanatus HOM05D006386 ORTHO05D007575 1.3e-44 184.1 241 47.3
Migut.D01482 Erythranthe guttata HOM05D006386 ORTHO05D007575 2.8e-44 183.0 242 42.1
Prupe.5G212600 Prunus persica HOM05D006386 ORTHO05D007575 6.3e-44 181.8 238 45.0
Thhalv10003465m.g Eutrema salsugineum HOM05D006386 ORTHO05D007575 3.1e-43 179.5 243 42.0
Cc04_g07860 Coffea canephora HOM05D006386 ORTHO05D007575 4.1e-43 179.1 240 42.1
AL7G44320 Arabidopsis lyrata HOM05D006386 ORTHO05D007575 7.0e-43 178.3 243 40.7
Lsat_1_v5_gn_4_112761 Lactuca sativa HOM05D006386 ORTHO05D007575 2.0e-42 176.8 237 41.8
HanXRQChr16g0502011 Helianthus annuus HOM05D006386 ORTHO05D007575 8.6e-41 171.4 242 41.3
CARHR217490 Cardamine hirsuta HOM05D006386 ORTHO05D007575 1.5e-40 170.6 244 39.3
Carub.0007s3127 Capsella rubella HOM05D006386 ORTHO05D007575 1.9e-40 170.2 247 38.9
Aa31LG4G9830 Aethionema arabicum HOM05D006386 ORTHO05D007575 2.5e-40 169.9 244 40.2
vmacro17651 Vaccinium macrocarpon HOM05D006386 ORTHO05D007575 3.3e-40 169.5 175 50.9
Ca_24277_v3 Cicer arietinum L. HOM05D006386 ORTHO05D007575 5.5e-40 168.7 104 90.4
AT5G35520 Arabidopsis thaliana HOM05D006386 ORTHO05D007575 1.0e-38 164.5 243 38.7
MSTRG.4502 Avicennia marina HOM05D006386 ORTHO05D007575 1.8e-38 163.7 240 40.8
BcaB06g26945 Brassica carinata HOM05D006386 ORTHO05D007575 2.3e-38 163.3 243 39.5
ECA246G4419 Erigeron canadensis HOM05D006386 ORTHO05D007575 3.0e-38 162.9 236 40.3
Lsat_1_v5_gn_4_112801 Lactuca sativa HOM05D006386 ORTHO05D007575 1.2e-37 161.0 231 39.8
SGA_v2.0_scaffold42G16024 Striga asiatica HOM05D006386 ORTHO05D007575 2.6e-37 159.8 265 39.2
ECA232G1078 Erigeron canadensis HOM05D006386 ORTHO05D007575 9.8e-37 157.9 245 37.6
CDE02G3865 Ceratophyllum demersum HOM05D006386 ORTHO05D007575 1.3e-36 157.5 239 40.2
Sp7g06840 Schrenkiella parvula HOM05D006386 ORTHO05D007575 1.3e-36 157.5 246 37.0
ATR0730G046 Amborella trichopoda HOM05D006386 ORTHO05D007575 1.7e-36 157.1 239 38.5
PSO017G3209 Papaver somniferum HOM05D006386 ORTHO05D007575 4.9e-36 155.6 244 38.5
C04p43230 Brassica napus HOM05D006386 ORTHO05D007575 2.4e-35 153.3 248 37.9
PSO478G3500 Papaver somniferum HOM05D006386 ORTHO05D007575 4.1e-35 152.5 244 37.7
BcaC02g09476 Brassica carinata HOM05D006386 ORTHO05D007575 5.4e-35 152.1 248 38.3
BolC4t25901H Brassica oleracea HOM05D006386 ORTHO05D007575 9.2e-35 151.4 248 38.3
HPP92_015441 Vanilla planifolia HOM05D006386 ORTHO05D007575 1.2e-34 151.0 238 37.4
Aqoxy6G00629 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 1.6e-34 150.6 231 37.7
SHI18989 Sapria himalayana HOM05D006386 ORTHO05D007575 1.0e-33 147.9 177 42.4
unitig_62.g23762 Utricularia gibba HOM05D006386 ORTHO05D007575 2.9e-33 146.4 217 39.2
Peaxi162Scf00119g00118 Petunia axillaris HOM05D006386 ORTHO05D007575 1.5e-32 144.1 252 38.1
MD06G1208100 Malus domestica HOM05D006386 ORTHO05D007575 2.5e-32 143.3 241 41.1
Actinidia33576 Actinidia chinensis HOM05D006386 ORTHO05D007575 9.5e-32 141.4 257 37.0
CsaV3_1G003130 Cucumis sativus L. HOM05D006386 ORTHO05D007575 6.8e-30 135.2 244 41.8
MBI10_g16789_MAGBIO Magnolia biondii HOM05D006386 ORTHO05D007575 8.3e-28 128.3 173 43.4
A04p09730 Brassica napus HOM05D006386 ORTHO05D007575 4.1e-27 125.9 241 35.3
BraA04t16635Z Brassica rapa HOM05D006386 ORTHO05D007575 3.5e-26 122.9 245 34.3
MSTRG.4503 Avicennia marina HOM05D006386 ORTHO05D007575 3.9e-25 119.4 178 38.8
Aqoxy3G00630 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 8.6e-25 118.2 239 33.5
Nitab4.5_0005402g0030 Nicotiana tabacum HOM05D002295 ORTHO05D007575 2.5e-24 116.7 233 34.8
Zm00001eb433940 Zea mays HOM05D006386 ORTHO05D007575 4.3e-24 115.9 198 34.8
CAN.G982.14 Capsicum annuum HOM05D006386 ORTHO05D007575 3.1e-22 109.8 137 40.1
AUR62036917 Chenopodium quinoa HOM05D006386 ORTHO05D007575 1.7e-20 104.0 144 42.4
Cpa.g.sc53.22 Carica papaya HOM05D006386 ORTHO05D007575 3.2e-19 99.8 133 44.4
Medtr4g110120 Medicago truncatula HOM05D006386 ORTHO05D007575 5.4e-19 99.0 63 81.0
Os02g0620100 Oryza sativa ssp. japonica HOM05D006386 ORTHO05D007575 6.0e-18 95.5 243 28.0
Zm00001eb065850 Zea mays HOM05D006386 ORTHO05D007575 1.0e-17 94.7 191 31.4
TWI81G0622 Tripterygium wilfordii HOM05D006386 ORTHO05D007575 1.3e-17 94.4 133 44.4
DCAR_029598 Daucus carota HOM05D006386 ORTHO05D007575 1.7e-17 94.0 139 41.7
Cpa.g.sc53.23 Carica papaya HOM05D006386 ORTHO05D007575 8.1e-15 85.1 73 60.3
Actinidia27067 Actinidia chinensis HOM05D006386 ORTHO05D007575 3.0e-09 66.6 57 57.9
Mapoly0051s0086 Marchantia polymorpha HOM05D006386 ORTHO05D007575 1.5e-08 64.3 213 23.9
MELO3C028557.2 Cucumis melo HOM05D006386 ORTHO05D007575 2.5e-08 63.5 55 56.4
Gorai.N008500 Gossypium raimondii HOM05D006386 ORTHO05D007575 2.8e-07 60.1 39 59.0
COL.COLO4_24165 Corchorus olitorius HOM05D006386 ORTHO05D007575 1.4e-06 57.8 57 56.1
Aqoxy6G02623 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 1.8e-06 57.4 104 30.8
Gorai.007G248400 Gossypium raimondii HOM05D006386 ORTHO05D007575 3.1e-06 56.6 37 59.5


User provided reference genes

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